357 Matching Annotations
  1. Jun 2021
  2. academic.oup.com academic.oup.com
    A hybrid de novo assembly of the sea pansy (Renilla muelleri) genome
    1
    1. scibot 23 Jun 2021
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giz026

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    academic.oup.com/gigascience/article/8/4/giz026/5426564
  3. academic.oup.com academic.oup.com
    The genome of the venomous snail Lautoconus ventricosus sheds light on the origin of conotoxin diversity
    1
    1. scibot 02 Jun 2021
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giab037

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    academic.oup.com/gigascience/article/10/5/giab037/6284011
  4. May 2021
  5. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Two high-quality de novo genomes from single ethanol-preserved specimens of tiny metazoans (Collembola)
    1
    1. scibot 27 May 2021
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giab035

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    ncbi.nlm.nih.gov/pmc/articles/PMC8138834/
  6. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome‐level genome assembly of the Arctic fox (Vulpes lagopus) using PacBio sequencing and Hi‐C technology
    1
    1. scibot 11 May 2021
      RRID:SCR_012954

      DOI: 10.1111/1755-0998.13397

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    onlinelibrary.wiley.com/doi/10.1111/1755-0998.13397
  7. onlinelibrary.wiley.com onlinelibrary.wiley.com
    The Meishan pig genome reveals structural variation mediated gene expression and phenotypic divergence underlying Asian pig domestication
    1
    1. scibot 11 May 2021
      RRID:SCR_012954

      DOI: 10.1111/1755-0998.13396

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    onlinelibrary.wiley.com/doi/10.1111/1755-0998.13396
  8. www.sciencedirect.com www.sciencedirect.com
    Repetitive Elements Trigger RIG-I-like Receptor Signaling that Regulates the Emergence of Hematopoietic Stem and Progenitor Cells
    1
    1. scibot 06 May 2021
      RRID:SCR_012954

      DOI: 10.1016/j.immuni.2020.10.007

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    sciencedirect.com/science/article/pii/S1074761320304489
  9. www.sciencedirect.com www.sciencedirect.com
    Whole-genome analysis of giraffe supports four distinct species
    1
    1. scibot 06 May 2021
      RRID:SCR_012954

      DOI: 10.1016/j.cub.2021.04.033

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    sciencedirect.com/science/article/pii/S0960982221005467
  10. Apr 2021
  11. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of the hard-shelled mussel Mytilus coruscus, a widely distributed species from the temperate areas of East Asia
    1
    1. scibot 27 Apr 2021
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giab024

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    academic.oup.com/gigascience/article/10/4/giab024/6247647
  12. academic.oup.com academic.oup.com
    A chromosome-level reference genome of the hazelnut, Corylus heterophylla Fisch
    1
    1. scibot 24 Apr 2021
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giab027

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    academic.oup.com/gigascience/article/10/4/giab027/6237163
  13. gigabytejournal.com gigabytejournal.com
    The genome of Tripterygium wilfordii and characterization of the celastrol biosynthesis pathway
    1
    1. scibot 19 Apr 2021
      RRID:SCR_012954

      DOI: 10.46471/gigabyte.14

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    gigabytejournal.com/articles/14
  14. academic.oup.com academic.oup.com
    A chromosome-level genome assembly for the Pacific oyster Crassostrea gigas
    1
    1. scibot 06 Apr 2021
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giab020

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    academic.oup.com/gigascience/article/10/3/giab020/6187865
  15. Mar 2021
  16. academic.oup.com academic.oup.com
    A chromosome‐level genome of the spider Trichonephila antipodiana reveals the genetic basis of its polyphagy and evidence of an ancient whole-genome duplication event
    1
    1. scibot 24 Mar 2021
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giab016

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    academic.oup.com/gigascience/article/10/3/giab016/6178709
  17. academic.oup.com academic.oup.com
    Genome sequence and genetic diversity analysis of an under-domesticated orphan crop, white fonio (Digitaria exilis)
    1
    1. scibot 18 Mar 2021
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giab013

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    academic.oup.com/gigascience/article/10/3/giab013/6168810
  18. Feb 2021
  19. academic.oup.com academic.oup.com
    The draft genome sequence of the grove snail Cepaea nemoralis
    1
    1. scibot 28 Feb 2021
      RRID:SCR_012954

      DOI: 10.1093/g3journal/jkaa071

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    academic.oup.com/g3journal/advance-article-abstract/doi/10.1093/g3journal/jkaa071/6080775
  20. www.g3journal.org www.g3journal.org
    Construction of Pseudomolecules for the Chinese Chestnut (Castanea mollissima) Genome
    1
    1. scibot 26 Feb 2021
      RRID:SCR_012954

      DOI: 10.1534/g3.120.401532

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    g3journal.org/content/10/10/3565
  21. academic.oup.com academic.oup.com
    An improved pig reference genome sequence to enable pig genetics and genomics research
    1
    1. scibot 26 Feb 2021
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giaa051

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    academic.oup.com/gigascience/article/9/6/giaa051/5858065
  22. Jan 2021
  23. link.springer.com link.springer.com
    The hard clam genome reveals massive expansion and diversification of inhibitors of apoptosis in Bivalvia
    1
    1. scibot 28 Jan 2021
      RRID:SCR_012954

      DOI: 10.1186/s12915-020-00943-9

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    link.springer.com/article/10.1186/s12915-020-00943-9
  24. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The RNA-binding protein SFPQ preserves long-intron splicing and regulates circRNA biogenesis in mammals
    1
    1. scibot 28 Jan 2021
      RRID:SCR_012954

      DOI: 10.7554/eLife.63088

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    ncbi.nlm.nih.gov/pmc/articles/PMC7819710/
  25. academic.oup.com academic.oup.com
    A chromosome-level genome assembly of the oriental river prawn, Macrobrachium nipponense
    1
    1. scibot 26 Jan 2021
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giaa160

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    academic.oup.com/gigascience/article/10/1/giaa160/6103632
  26. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A new duck genome reveals conserved and convergently evolved chromosome architectures of birds and mammals
    1
    1. scibot 14 Jan 2021
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giaa142

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    ncbi.nlm.nih.gov/pmc/articles/PMC7787181/
  27. academic.oup.com academic.oup.com
    Chromosome-level reference genome of the European wasp spider Argiope bruennichi: a resource for studies on range expansion and evolutionary adaptation
    1
    1. scibot 14 Jan 2021
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giaa148

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    academic.oup.com/gigascience/article/10/1/giaa148/6067174
  28. Dec 2020
  29. academic.oup.com academic.oup.com
    High-quality chromosome-level genome assembly and full-length transcriptome analysis of the pharaoh ant Monomorium pharaonis
    1
    1. scibot 19 Dec 2020
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giaa143

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    academic.oup.com/gigascience/article/9/12/giaa143/6034789
  30. academic.oup.com academic.oup.com
    Long-read assembly of the Brassica napus reference genome Darmor-bzh
    1
    1. scibot 19 Dec 2020
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giaa137

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    academic.oup.com/gigascience/article/9/12/giaa137/6034787
  31. academic.oup.com academic.oup.com
    Genome sequencing of deep-sea hydrothermal vent snails reveals adaptions to extreme environments
    1
    1. scibot 19 Dec 2020
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giaa139

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    academic.oup.com/gigascience/article/9/12/giaa139/6034786
  32. academic.oup.com academic.oup.com
    Chromosome-level draft genome of a diploid plum (Prunus salicina)
    1
    1. scibot 16 Dec 2020
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giaa130

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    academic.oup.com/gigascience/article/9/12/giaa130/6029397
  33. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Accurate assembly of the olive baboon (Papio anubis) genome using long-read and Hi-C data
    1
    1. scibot 12 Dec 2020
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giaa134

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    ncbi.nlm.nih.gov/pmc/articles/PMC7719865/
  34. academic.oup.com academic.oup.com
    Chromosomal genome of Triplophysa bleekeri provides insights into its evolution and environmental adaptation
    1
    1. scibot 07 Dec 2020
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giaa132

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    academic.oup.com/gigascience/article/9/11/giaa132/5999722
  35. Nov 2020
  36. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Adaptive venom evolution and toxicity in octopods is driven by extensive novel gene formation, expansion, and loss
    1
    1. scibot 20 Nov 2020
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giaa120

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    pubmed.ncbi.nlm.nih.gov/33175168/
  37. Oct 2020
  38. academic.oup.com academic.oup.com
    Pacific Biosciences assembly with Hi-C mapping generates an improved, chromosome-level goose genome
    1
    1. scibot 30 Oct 2020
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giaa114

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    academic.oup.com/gigascience/article/9/10/giaa114/5938995
  39. Sep 2020
  40. academic.oup.com academic.oup.com
    Generation of a chromosome-scale genome assembly of the insect-repellent terpenoid-producing Lamiaceae species, Callicarpa americana
    1
    1. scibot 26 Sep 2020
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giaa093

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    academic.oup.com/gigascience/article/9/9/giaa093/5902285
  41. www.g3journal.org www.g3journal.org
    High-Quality Genome Assembly and Annotation of the Big-Eye Mandarin Fish (Siniperca knerii)
    1
    1. scibot 26 Sep 2020
      RRID:SCR_012954

      DOI: 10.1534/g3.119.400930

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    g3journal.org/content/10/3/877
  42. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Construction of a chromosome-scale long-read reference genome assembly for potato
    1
    1. scibot 26 Sep 2020
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giaa100

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    pubmed.ncbi.nlm.nih.gov/32964225/
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level de novo assembly of the pig-tailed macaque genome using linked-read sequencing and HiC proximity scaffolding
    1
    1. scibot 23 Sep 2020
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giaa069

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    ncbi.nlm.nih.gov/pmc/articles/PMC7350979/
  44. academic.oup.com academic.oup.com
    Chromosome-level genome assembly and annotation of the loquat ( Eriobotrya japonica ) genome
    1
    1. scibot 23 Sep 2020
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giaa015

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    academic.oup.com/gigascience/article/9/3/giaa015/5788433
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A High-Quality Chromosomal Genome Assembly of Diospyros oleiferaCheng
    1
    1. scibot 23 Sep 2020
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giz164

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    ncbi.nlm.nih.gov/pmc/articles/PMC6964648/
  46. academic.oup.com academic.oup.com
    Chromosome-level reference genome of the jellyfish Rhopilema esculentum
    1
    1. scibot 17 Sep 2020
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giaa036

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    academic.oup.com/gigascience/article/9/4/giaa036/5823175
  47. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The gene-rich genome of the scallop Pecten maximus
    1
    1. scibot 16 Sep 2020
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giaa037

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    ncbi.nlm.nih.gov/pmc/articles/PMC7191990/
  48. academic.oup.com academic.oup.com
    Genomic consequences of dietary diversification and parallel evolution due to nectarivory in leaf-nosed bats
    1
    1. scibot 16 Sep 2020
      RRID:SCR_012954

      DOI: 10.1093/gigascience/giaa059

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    academic.oup.com/gigascience/article/9/6/giaa059/5854408
  49. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome‐level genome assembly of a cyprinid fish Onychostoma macrolepis by integration of Nanopore Sequencing, Bionano and Hi‐C technology
    1
    1. scibot 16 Sep 2020
      RRID:SCR_012954

      DOI: 10.1111/1755-0998.13190

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    onlinelibrary.wiley.com/doi/10.1111/1755-0998.13190
  50. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of Aldrichina grahami , a forensically important blowfly
    1
    1. scibot 16 Sep 2020
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    Genome sequence of the agarwood tree Aquilaria sinensis (Lour.) Spreng: the first chromosome-level draft genome in the Thymelaeceae family
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    A haplotype-resolved, de novo genome assembly for the wood tiger moth (Arctia plantaginis) through trio binning
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  53. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Sequencing smart: De novo sequencing and assembly approaches for a non-model mammal
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  54. www.sciencedirect.com www.sciencedirect.com
    LINE-1 specific nuclear organization in mice olfactory sensory neurons
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  55. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Draft Genome of the Asian Buffalo Leech Hirudinaria manillensis
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    A draft genome sequence of the elusive giant squid, Architeuthis dux
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    Genetic Variation in Type 1 Diabetes Reconfigures the 3D Chromatin Organization of T Cells and Alters Gene Expression
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    Chromosome-level genome assembly of the female western mosquitofish ( Gambusia affinis )
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  59. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome‐level genome assembly of an important pine defoliator, Dendrolimus punctatus (Lepidoptera; Lasiocampidae)
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      DOI: 10.1111/1755-0998.13169

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    Continuous chromosome-scale haplotypes assembled from a single interspecies F1 hybrid of yak and cattle
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      DOI: 10.1093/gigascience/giaa029

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  61. elifesciences.org elifesciences.org
    KRAB-zinc finger protein gene expansion in response to active retrotransposons in the murine lineage
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      DOI: 10.7554/eLife.56337

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    Chromosomal-level assembly of Juglans sigillata genome using Nanopore, BioNano, and Hi-C analysis
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      DOI: 10.1093/gigascience/giaa006

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  63. academic.oup.com academic.oup.com
    The chromosome-level draft genome of Dalbergia odorifera
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  64. academic.oup.com academic.oup.com
    An improved pig reference genome sequence to enable pig genetics and genomics research
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  65. www.frontiersin.org www.frontiersin.org
    A Chromosome-Scale Assembly of the Asian Honeybee Apis cerana Genome
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      DOI: 10.3389/fgene.2020.00279

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  66. Jan 2020
  67. www.sciencedirect.com www.sciencedirect.com
    A Species-Wide Inventory of NLR Genes and Alleles in Arabidopsis thaliana
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      DOI: 10.1016/j.cell.2019.07.038

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  68. academic.oup.com academic.oup.com
    The draft nuclear genome assembly of Eucalyptus pauciflora: a pipeline for comparing de novo assemblies
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      DOI: 10.1093/gigascience/giz160

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  69. academic.oup.com academic.oup.com
    High-coverage genomes to elucidate the evolution of penguins
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      DOI: 10.1093/gigascience/giz117

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  70. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Pseudomolecule-level assembly of the Chinese oil tree yellowhorn (Xanthoceras sorbifolium) genome
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      DOI: 10.1093/gigascience/giz070

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  71. academic.oup.com academic.oup.com
    Hybrid de novo genome assembly of Chinese chestnut ( Castanea mollissima )
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      DOI: 10.1093/gigascience/giz112

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  72. academic.oup.com academic.oup.com
    Chromosome-level assembly of the mustache toad genome using third-generation DNA sequencing and Hi-C analysis
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      DOI: 10.1093/gigascience/giz114

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  73. www.frontiersin.org www.frontiersin.org
    Draft Genome and Complete Hox-Cluster Characterization of the Sterlet Sturgeon (Acipenser ruthenus)
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      DOI: 10.3389/fgene.2019.00776

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  74. academic.oup.com academic.oup.com
    Genome and population sequencing of a chromosome-level genome assembly of the Chinese tapertail anchovy ( Coilia nasus ) provides novel insights into migratory adaptation
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      DOI: 10.1093/gigascience/giz157

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  75. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Whole-genome sequencing and analysis of the Chinese herbal plant Gelsemium elegans
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      DOI: 10.1016/j.apsb.2019.08.004

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  76. academic.oup.com academic.oup.com
    A high-quality genome assembly for the endangered golden snub-nosed monkey (Rhinopithecus roxellana)
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      DOI: 10.1093/gigascience/giz098

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  77. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A haplotype-resolved draft genome of the European sardine (Sardina pilchardus)
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      DOI: 10.1093/gigascience/giz059

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  78. www.sciencedirect.com www.sciencedirect.com
    The piRNA Response to Retroviral Invasion of the Koala Genome
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      DOI: 10.1016/j.cell.2019.09.002

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  79. academic.oup.com academic.oup.com
    High-quality Schistosoma haematobium genome achieved by single-molecule and long-range sequencing
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      DOI: 10.1093/gigascience/giz108

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    Genomic evidence of neo-sex chromosomes in the eastern yellow robin
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      DOI: 10.1093/gigascience/giz111

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  81. academic.oup.com academic.oup.com
    De novo genome assembly of the endangered Acer yangbiense , a plant species with extremely small populations endemic to Yunnan Province, China
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      DOI: 10.1093/gigascience/giz085

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  82. academic.oup.com academic.oup.com
    Chromosomal-level reference genome of Chinese peacock butterfly ( Papilio bianor ) based on third-generation DNA sequencing and Hi-C analysis
    1
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      DOI: 10.1093/gigascience/giz128

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  83. academic.oup.com academic.oup.com
    Chromosomal-level assembly of the blood clam, Scapharca ( Anadara ) broughtonii , using long sequence reads and Hi-C
    1
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      DOI: 10.1093/gigascience/giz067

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  84. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome‐level genome assembly of the razor clam Sinonovacula constricta (Lamarck, 1818)
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      DOI: 10.1111/1755-0998.13086

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  85. link.springer.com link.springer.com
    Enhancement of de novo sequencing, assembly and annotation of the Mongolian gerbil genome with transcriptome sequencing and assembly from several different tissues
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      DOI: 10.1186/s12864-019-6276-y

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  86. academic.oup.com academic.oup.com
    A chromosome-level draft genome of the grain aphid Sitobion miscanthi
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      DOI: 10.1093/gigascience/giz101

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  87. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-scale genome assembly of cucumber (Cucumis sativus L.)
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      DOI: 10.1093/gigascience/giz072

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  88. academic.oup.com academic.oup.com
    A chromosomal-level genome assembly for the giant African snail Achatina fulica
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      DOI: 10.1093/gigascience/giz124

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  89. academic.oup.com academic.oup.com
    Draft genome sequence of Solanum aethiopicum provides insights into disease resistance, drought tolerance, and the evolution of the genome
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      DOI: 10.1093/gigascience/giz115

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  90. academic.oup.com academic.oup.com
    A draft genome assembly of halophyte Suaeda aralocaspica, a plant that performs C4 photosynthesis within individual cells
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      DOI: 10.1093/gigascience/giz116

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    A chromosomal-scale genome assembly of Tectona grandis reveals the importance of tandem gene duplication and enables discovery of genes in natural product biosynthetic pathways
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    A near-chromosome-scale genome assembly of the gemsbok (Oryx gazella): an iconic antelope of the Kalahari desert
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    De novo assembly of the Indian blue peacock ( Pavo cristatus ) genome using Oxford Nanopore technology and Illumina sequencing
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    Heteromeric RNP Assembly at LINEs Controls Lineage-Specific RNA Processing
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    Innovative assembly strategy contributes to understanding the evolution and conservation genetics of the endangered Solenodon paradoxus from the island of Hispaniola
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    Improved de novo genome assembly and analysis of the Chinese cucurbit Siraitia grosvenorii, also known as monk fruit or luo-han-guo
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    De novo genome assembly of the red silk cotton tree (Bombax ceiba)
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    Population genomic data reveal genes related to important traits of quail
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  135. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  136. academic.oup.com academic.oup.com
    Whole-Genome De Novo sequencing reveals unique genes that contributed to the adaptive evolution of the mikado pheasant
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  138. academic.oup.com academic.oup.com
    Genome assembly of the Pink Ipê (Handroanthus impetiginosus, Bignoniaceae), a highly valued, ecologically keystone Neotropical timber forest tree
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  141. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Draft genome of the protandrous Chinese black porgy, Acanthopagrus schlegelii
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  142. europepmc.org europepmc.org
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  145. europepmc.org europepmc.org
    Genome sequence of the small brown planthopper, Laodelphax striatellus.
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  151. elifesciences.org elifesciences.org
    Deep transcriptome annotation enables the discovery and functional characterization of cryptic small proteins
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  152. europepmc.org europepmc.org
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  154. academic.oup.com academic.oup.com
    The draft genome assembly of Rhododendron delavayi Franch. var. delavayi
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  155. Nov 2017
  156. academic.oup.com academic.oup.com
    The draft genome of blunt snout bream (Megalobrama amblycephala) reveals the development of intermuscular bone and adaptation to herbivorous diet
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  157. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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    Genome assembly and transcriptome resource for river buffalo, Bubalus bubalis (2n = 50)
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    De novo genome assembly and annotation of Australia's largest freshwater fish, the Murray cod (Maccullochella peelii), from Illumina and Nanopore sequencing read
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  162. academic.oup.com academic.oup.com
    De novo genome assembly of Camptotheca acuminata, a natural source of the anti-cancer compound camptothecin
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  163. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing
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  164. academic.oup.com academic.oup.com
    Draft genome of the Antarctic dragonfish, Parachaenichthys charcoti
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  165. academic.oup.com academic.oup.com
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  166. academic.oup.com academic.oup.com
    Sequencing, de novo assembling, and annotating the genome of the endangered Chinese crocodile lizard Shinisaurus crocodilurus
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  167. academic.oup.com academic.oup.com
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  168. elifesciences.org elifesciences.org
    Stella modulates transcriptional and endogenous retrovirus programs during maternal-to-zygotic transition
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