243 Matching Annotations
  1. Last 7 days
  2. www.biorxiv.org www.biorxiv.org
    Single-cell multiomics reveals a gene regulatory circuit promoting leukemia cell differentiation
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    1. scibot 16 May 2024
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      DOI: 10.1101/2024.02.29.582681

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    biorxiv.org/content/10.1101/2024.02.29.582681v1
  3. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PAX6 promotes neuroendocrine phenotypes of prostate cancer via enhancing MET/STAT5A-mediated chromatin accessibility
    1
    1. scibot 16 May 2024
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      DOI: 10.1186/s13046-024-03064-1

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    ncbi.nlm.nih.gov/pmc/articles/PMC11094950/
  4. May 2024
  5. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Combined CDK4/6 and ERK1/2 inhibition enhances anti-tumor activity in NF1-associated plexiform neurofibroma
    1
    1. scibot 02 May 2024
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    ncbi.nlm.nih.gov/pmc/articles/PMC11060649/
  6. Apr 2024
  7. www.sciencedirect.com www.sciencedirect.com
    Thbs1 regulates skeletal muscle mass in a TGFβ-Smad2/3-ATF4-dependent manner
    1
    1. scibot 30 Apr 2024
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      DOI: 10.1016/j.celrep.2024.114149

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    sciencedirect.com/science/article/pii/S2211124724004777
  8. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Elucidating the role of EPPK1 in lung adenocarcinoma development
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    1. scibot 12 Apr 2024
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      DOI: 10.1186/s12885-024-12185-x

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    ncbi.nlm.nih.gov/pmc/articles/PMC11005125/
  9. Mar 2024
  10. www.nature.com www.nature.com
    RBBP6 maintains glioblastoma stem cells through CPSF3-dependent alternative polyadenylation
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    1. scibot 28 Mar 2024
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      DOI: 10.1038/s41421-024-00654-3

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    nature.com/articles/s41421-024-00654-3
  11. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Roflumilast inhibits tumor growth and migration in STK11/LKB1 deficient pancreatic cancer
    1
    1. scibot 12 Mar 2024
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      DOI: 10.1038/s41420-024-01890-y

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    ncbi.nlm.nih.gov/pmc/articles/PMC10924943/
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    A cellular model provides insights into the pathogenicity of the oncogenic FOXL2 somatic variant p.Cys134Trp
    1
    1. scibot 08 Mar 2024
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      DOI: 10.1038/s41416-024-02613-x

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  13. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    INX-315, a selective CDK2 inhibitor, induces cell cycle arrest and senescence in solid tumors
    1
    1. scibot 06 Mar 2024
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      DOI: 10.1158/2159-8290.CD-23-0954

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    ncbi.nlm.nih.gov/pmc/articles/PMC10905675/
  14. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Patient derived tumoroids of high grade neuroendocrine neoplasms for more personalized therapies
    1
    1. scibot 06 Mar 2024
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      DOI: 10.1038/s41698-024-00549-2

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    ncbi.nlm.nih.gov/pmc/articles/PMC10907580/
  15. Feb 2024
  16. aacrjournals.org aacrjournals.org
    A Systems Biology Approach to Understand the Racial Disparities in Colorectal Cancer
    1
    1. scibot 27 Feb 2024
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    aacrjournals.org/cancerrescommun/article/4/1/103/733106/A-Systems-Biology-Approach-to-Understand-the
  17. 52.53.155.43 52.53.155.43
    cd-23-0954-html.html
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    1. scibot 27 Feb 2024
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  18. aacrjournals.org aacrjournals.org
    A novel irreversible TEAD inhibitor, SWTX-143, blocks Hippo pathway transcriptional output and causes tumor regression in preclinical mesothelioma models
    1
    1. scibot 24 Feb 2024
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      DOI: 10.1158/1535-7163.MCT-22-0681

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    aacrjournals.org/mct/article/23/1/3/732154/A-Novel-Irreversible-TEAD-Inhibitor-SWTX-143
  19. aacrjournals.org aacrjournals.org
    Integrative multi-omics analysis reveals different metabolic phenotypes based on molecular characteristics in thyroid cancer
    1
    1. scibot 24 Feb 2024
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      DOI: 10.1158/1078-0432.CCR-23-2025

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    aacrjournals.org/clincancerres/article/30/4/883/734218/Integrative-Multi-omics-Analysis-Reveals-Different
  20. aacrjournals.org aacrjournals.org
    R-loop accumulation in spliceosome mutant leukemias confers sensitivity to PARP1 inhibition by triggering transcription-replication conflicts
    1
    1. scibot 23 Feb 2024
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      DOI: 10.1158/0008-5472.CAN-23-3239

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    aacrjournals.org/cancerres/article/84/4/577/734131/R-Loop-Accumulation-in-Spliceosome-Mutant
  21. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The Immunogenomic Landscape of Neuroendocrine Prostate Cancer
    1
    1. scibot 02 Feb 2024
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      DOI: 10.1158/1078-0432.CCR-22-3743

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    ncbi.nlm.nih.gov/pmc/articles/PMC10524949/
  22. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Oncogenic Transformation Drives DNA Methylation Loss and Transcriptional Activation of Transposable Element Loci
    1
    1. scibot 02 Feb 2024
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      DOI: 10.1158/0008-5472.CAN-22-3485

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    ncbi.nlm.nih.gov/pmc/articles/PMC10527578/
  23. www.sciencedirect.com www.sciencedirect.com
    SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway
    1
    1. scibot 02 Feb 2024
      RRID:SCR_000154

      DOI: 10.1016/j.canlet.2024.216667

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    sciencedirect.com/science/article/pii/S0304383524000612
  24. link.springer.com link.springer.com
    Education as Risk Factor of Mild Cognitive Impairment: The Link to the Gut Microbiome
    1
    1. scibot 01 Feb 2024
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      DOI: 10.14283/jpad.2024.19

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    link.springer.com/article/10.14283/jpad.2024.19
  25. Jan 2024
  26. www.sciencedirect.com www.sciencedirect.com
    5-Hydroxymethylcytosine signals in serum are a predictor of chemoresistance in high-grade serous ovarian cancer
    1
    1. scibot 25 Jan 2024
      SCR_000154

      DOI: 10.1016/j.ygyno.2024.01.001

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    sciencedirect.com/science/article/pii/S0090825824000015
  27. aacrjournals.org aacrjournals.org
    A Systems Biology Approach to Understand the Racial Disparities in Colorectal Cancer
    1
    1. scibot 18 Jan 2024
      RRID:SCR_000154

      DOI: 10.1158/2767-9764.CRC-22-0464

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    aacrjournals.org/cancerrescommun/article/4/1/103/733106/A-Systems-Biology-Approach-to-Understand-the
  28. Dec 2023
  29. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Fatty Acid Oxidation Mediated by Malonyl-CoA Decarboxylase Represses Renal Cell Carcinoma Progression
    1
    1. scibot 06 Dec 2023
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      DOI: 10.1158/0008-5472.CAN-23-0969

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    ncbi.nlm.nih.gov/pmc/articles/PMC10690093/
  30. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Reversal of lactate and PD-1-mediated macrophage immunosuppression controls growth of PTEN/p53-deficient prostate cancer
    1
    1. scibot 02 Dec 2023
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      DOI: 10.1158/1078-0432.CCR-22-3350

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    ncbi.nlm.nih.gov/pmc/articles/PMC10192075/
  31. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Hypoxia potentiates the inflammatory fibroblast phenotype promoted by pancreatic cancer cell-derived cytokines
    1
    1. scibot 02 Dec 2023
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      DOI: 10.1158/0008-5472.CAN-22-2316

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    ncbi.nlm.nih.gov/pmc/articles/PMC10658995/
  32. Nov 2023
  33. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Immunosuppressive low-density neutrophils in the blood of cancer patients display a mature phenotype
    1
    1. scibot 11 Nov 2023
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      DOI: 10.26508/lsa.202302332

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    ncbi.nlm.nih.gov/pmc/articles/PMC10628041/
  34. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Zinc Finger MYND-Type Containing 8 (ZMYND8) is epigenetically regulated in mutant Isocitrate Dehydrogenase 1 (IDH1) glioma to promote radioresistance
    1
    1. scibot 04 Nov 2023
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      DOI: 10.1158/1078-0432.CCR-22-1896

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    ncbi.nlm.nih.gov/pmc/articles/PMC10159884/
  35. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    In Vivo Screening Unveils Pervasive RNA-Binding Protein Dependencies in Leukemic Stem Cells and Identifies ELAVL1 as a Therapeutic Target
    2
    1. scibot 03 Nov 2023
      RRID:SCR_000154

      DOI: 10.1158/2643-3230.BCD-22-0086

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      DOI: 10.1158/2643-3230.BCD-22-0086

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    ncbi.nlm.nih.gov/pmc/articles/PMC10150294/
  36. Oct 2023
  37. www.biorxiv.org www.biorxiv.org
    Chondrodysplasia-inducing COL2A1 p.Gly1170Ser causes an ER storage defect without associated unfolded protein response in a human cartilage model
    1
    1. scibot 27 Oct 2023
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      DOI: 10.1101/2023.10.19.562780

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    biorxiv.org/content/10.1101/2023.10.19.562780v3
  38. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Spatial Profiling of Circular RNAs in Cancer Reveals High Expression in Muscle and Stromal Cells
    1
    1. scibot 20 Oct 2023
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      DOI: 10.1158/0008-5472.CAN-23-0748

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    ncbi.nlm.nih.gov/pmc/articles/PMC10570686/
  39. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Colorectal Cancer Organoid–Stroma Biobank Allows Subtype-Specific Assessment of Individualized Therapy Responses
    1
    1. scibot 07 Oct 2023
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      DOI: 10.1158/2159-8290.CD-23-0050

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    ncbi.nlm.nih.gov/pmc/articles/PMC10551667/
  40. 52.53.155.43 52.53.155.43
    mct-22-0681-html.html
    1
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      DOI: 10.1158/1535-7163.mct-22-0681

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  41. Sep 2023
  42. 52.53.155.43 52.53.155.43
    2584-html.html
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      DOI: 10.1158/0008-5472.CAN-22-3485

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    52.53.155.43/b320dae4ebc2856ca2e3b35d653595100514acab/2584-html.html
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Poor Outcome in Postpartum Breast Cancer Patients Is Associated with Distinct Molecular and Immunologic Features
    1
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      DOI: 10.1158/1078-0432.CCR-22-3645

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    ncbi.nlm.nih.gov/pmc/articles/PMC10502474/
  44. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Molecular Subtypes of Head and Neck Cancer in Patients of African Ancestry
    1
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      DOI: 10.1158/1078-0432.CCR-22-2258

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    ncbi.nlm.nih.gov/pmc/articles/PMC9991972/
  45. Aug 2023
  46. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Activator protein-1 (AP-1) signaling inhibits the growth of Ewing sarcoma cells in response to DNA replication stress
    1
    1. scibot 26 Aug 2023
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      DOI: 10.1158/2767-9764.CRC-23-0268

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    ncbi.nlm.nih.gov/pmc/articles/PMC10434289/
  47. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Network analysis identifies strain-dependent response to tau and tau seeding-associated genes
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      DOI: 10.1084/jem.20230180

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    ncbi.nlm.nih.gov/pmc/articles/PMC10443211/
  48. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    DNA-Methylome–Based Tumor Hypoxia Classifier Identifies HPV-Negative Head and Neck Cancer Patients at Risk for Locoregional Recurrence after Primary Radiochemotherapy
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    1. scibot 19 Aug 2023
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      DOI: 10.1158/1078-0432.CCR-22-3790

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    ncbi.nlm.nih.gov/pmc/articles/PMC10425733/
  49. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Original research: Defining the spatial distribution of extracellular adenosine revealed a myeloid-dependent immunosuppressive microenvironment in pancreatic ductal adenocarcinoma
    1
    1. scibot 12 Aug 2023
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      DOI: 10.1136/jitc-2022-006457

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    ncbi.nlm.nih.gov/pmc/articles/PMC10414095/
  50. 52.53.155.43 52.53.155.43
    crc-23-0268-html.html
    1
    1. scibot 11 Aug 2023
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  51. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    β-Catenin Drives Butyrophilin-like Molecule Loss and γδ T-cell Exclusion in Colon Cancer
    1
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      RRID:SCR_000154

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  52. dx.doi.org dx.doi.org
    Clinical importance of the lncRNA NEAT1 in cancer patients treated with immune checkpoint inhibitors.
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      DOI: 10.1158/1078-0432.CCR-22-3714

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  53. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Proteasome Inhibition Sensitizes Liposarcoma to MDM2 Inhibition with Nutlin-3 by Activating the ATF4/CHOP Stress Response Pathway
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  54. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Characterizing the Immune Microenvironment and Neoantigen Landscape of Hürthle Cell Carcinoma to Identify Potential Immunologic Vulnerabilities
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  55. Jul 2023
  56. 52.53.155.43 52.53.155.43
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  57. 52.53.155.43 52.53.155.43
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  58. Jun 2023
  59. 52.53.155.43 52.53.155.43
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  60. 52.53.155.43 52.53.155.43
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  61. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Disruption of the gut microbiota confers cisplatin resistance in epithelial ovarian cancer
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  62. dx.doi.org dx.doi.org
    A transcriptome-based precision oncology platform for patient-therapy alignment in a diverse set of treatment resistant malignancies
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  63. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Circulating hsa-miR-5096 predicts 18F-FDG PET/CT positivity and modulates somatostatin receptor 2 expression: a novel miR-based assay for pancreatic neuroendocrine tumors
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  64. dx.doi.org dx.doi.org
    Myosin light chain kinase inhibition potentiates the anti-tumor effects of avapritinib in PDGFRA D842V-mutant gastrointestinal stromal tumor
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  65. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    iBRIDGE: A Data Integration Method to Identify Inflamed Tumors from Single-Cell RNAseq Data and Differentiate Cell Type–Specific Markers of Immune-Cell Infiltration
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  66. aacrjournals.org aacrjournals.org
    Enhanced glutaminolysis drives hypoxia-induced chemoresistance in pancreatic cancer
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    aacrjournals.org/cancerres/article/83/5/735/716680/Enhanced-Glutaminolysis-Drives-Hypoxia-Induced
  67. aacrjournals.org aacrjournals.org
    HAND2 assists MYCN enhancer invasion to regulate a noradrenergic neuroblastoma phenotype
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    aacrjournals.org/cancerres/article/83/5/686/716682/HAND2-Assists-MYCN-Enhancer-Invasion-to-Regulate-a
  68. www.biorxiv.org www.biorxiv.org
    Tyramine promotes colon cancer risk and development by inducing DNA damage and inflammation
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    biorxiv.org/content/10.1101/2023.05.25.542254v1
  69. May 2023
  70. www.sciencedirect.com www.sciencedirect.com
    Exploration of the immunogenetic landscape of hyperprogressive disease after combined immunotherapy in cancer patients
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    sciencedirect.com/science/article/pii/S2589004223007976
  71. 52.53.155.43 52.53.155.43
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  72. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Integrative Metatranscriptomic Analysis Reveals Disease-specific Microbiome–host Interactions in Oral Squamous Cell Carcinoma
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  73. Apr 2023
  74. aacrjournals.org aacrjournals.org
    Genomic and transcriptomic characteristics of metastatic thyroid cancers with exceptional responses to radioactive iodine therapy.
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    aacrjournals.org/clincancerres/article/29/8/1620/725053/Genomic-and-Transcriptomic-Characteristics-of
  75. aacrjournals.org aacrjournals.org
    IL-18 receptor signaling regulates tumor-reactive CD8+ T-cell exhaustion via activation of the IL-2/STAT5/mTOR pathway in a pancreatic cancer model
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    aacrjournals.org/cancerimmunolres/article/11/4/421/718978/IL18-Receptor-Signaling-Regulates-Tumor-Reactive
  76. Mar 2023
  77. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Elevated Dietary Carbohydrate and Glycemic Intake Associate with an Altered Oral Microbial Ecosystem in Two Large U.S. Cohorts
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  78. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Tumor-associated macrophages respond to chemotherapy by detrimental transcriptional reprogramming and suppressing stabilin-1 mediated clearance of EGF
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  79. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Cnih3 Deletion Dysregulates Dorsal Hippocampal Transcription across the Estrous Cycle
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  80. link.springer.com link.springer.com
    Expression of down-regulated ERV LTR elements associates with immune activation in human small-cell lung cancers
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      DOI: 10.1186/s13100-023-00290-w

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  81. www.nature.com www.nature.com
    A noncanonical response to replication stress protects genome stability through ROS production, in an adaptive manner
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      DOI: 10.1038/s41418-023-01141-0

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  82. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Smoking-associated Downregulation of FILIP1L Enhances Lung Adenocarcinoma Progression Through Mucin Production, Inflammation, and Fibrosis
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  83. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    CHD1 promotes sensitivity to Aurora kinase inhibitors by suppressing interaction of AURKA with its coactivator TPX2
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  84. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Phagocytosis of Glioma Cells Enhances the Immunosuppressive Phenotype of Bone Marrow–Derived Macrophages
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  85. Feb 2023
  86. link.springer.com link.springer.com
    The 27-gene IO score is associated with efficacy of PD-1/L1 inhibitors independent of FGFR expression in a real-world metastatic urothelial carcinoma cohort
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  87. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Systematic Interrogation of Tumor Cell Resistance to Chimeric Antigen Receptor T-cell Therapy in Pancreatic Cancer
    1
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  88. link.springer.com link.springer.com
    The BRD4 inhibitor JQ1 augments the antitumor efficacy of abemaciclib in preclinical models of gastric carcinoma
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      DOI: 10.1186/s13046-023-02615-2

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  89. Jan 2023
  90. 52.53.155.43 52.53.155.43
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  91. academic.oup.com academic.oup.com
    Integrating methylome and transcriptome signatures expands the molecular classification of the pituitary tumors
    1
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      DOI: 10.1210/clinem/dgac703

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    academic.oup.com/jcem/advance-article/doi/10.1210/clinem/dgac703/6887355
  92. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The Novel Nucleoside Analogue ProTide NUC-7738 Overcomes Cancer Resistance Mechanisms In Vitro and in a First-In-Human Phase I Clinical Trial
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      DOI: 10.1158/1078-0432.CCR-21-1652

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  93. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    ANGPTL4-Mediated Promotion of Glycolysis Facilitates the Colonization of Fusobacterium nucleatum in Colorectal Cancer
    1
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      DOI: 10.1158/0008-5472.CAN-21-2273

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  94. www.sciencedirect.com www.sciencedirect.com
    Inhibition of the PI3K/AKT/mTOR signaling promotes an M1 macrophage switch by repressing the ATF3-CXCL8 axis in Ewing sarcoma
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      DOI: 10.1016/j.canlet.2022.216042

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  95. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome-level genome assembly of Dastarcus helophoroides provides insights into CYP450 genes expression upon insecticide exposure
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      DOI: 10.1002/ps.7319

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  96. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PRC2 Inactivating Mutations in Cancer Enhance Cytotoxic Response to DNMT1 Targeted Therapy via Enhanced Viral Mimicry
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  97. Dec 2022
  98. 52.53.155.43 52.53.155.43
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  99. link.springer.com link.springer.com
    Towards resolution of the intron retention paradox in breast cancer
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  100. aacrjournals.org aacrjournals.org
    NOTCH signaling limits the response of Low Grade Serous Ovarian Cancers to MEK inhibition
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  101. 52.53.155.43 52.53.155.43
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  102. Nov 2022
  103. academic.oup.com academic.oup.com
    GIP affects hepatic fat and brown adipose tissue thermogenesis, but not white adipose tissue transcriptome in T1D
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  104. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A ketogenic diet in combination with gemcitabine increases survival in pancreatic cancer KPC mice
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  106. Oct 2022
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    STAG2 expression is associated with adverse survival outcomes and regulates cell phenotype in muscle-invasive bladder cancer
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  108. Sep 2022
  109. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Pro-metastatic and mesenchymal gene expression signatures characterize circulating tumor cells of neuroblastoma patients with bone marrow metastases and relapse
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    Tumor Cell Extrinsic Synaptogyrin 3 Expression as a Diagnostic and Prognostic Biomarker in Head and Neck Cancer
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    Lactate: A regulator of immune microenvironment and a clinical prognosis indicator in colorectal cancer
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    Acquired semi-squamatization during chemotherapy suggests differentiation as a therapeutic strategy for bladder cancer
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  113. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Intracellular cholesterol pools regulate oncogenic signaling and epigenetic circuitries in Early T-cell Precursor Acute Lymphoblastic Leukemia
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  114. Aug 2022
  115. 52.53.155.43 52.53.155.43
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  116. 52.53.155.43 52.53.155.43
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  117. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Circulating microRNA: Myocardium-derived prenatal biomarker of ventricular septal defects
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  118. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The DCMU Herbicide Shapes T-cell Functions By Modulating Micro-RNA Expression Profiles
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  119. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Warming northward shifting southern limits of the iconic temperate seagrass (Zostera marina)
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  120. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Mapping of m6A and Its Regulatory Targets in Prostate Cancer Reveals a METTL3-low Induction of Therapy Resistance
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  121. Jul 2022
  122. www.medrxiv.org www.medrxiv.org
    Addition of losartan to FOLFORINOX and chemoradiation downregulates pro-invasion and immunosuppression-associated genes in locally advanced pancreatic cancer
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  123. Jun 2022
  124. 52.53.155.43 52.53.155.43
    KCa3.1 differentially regulates trachea and bronchi epithelial gene expression in a chronic-asthma mouse model
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  125. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Activation of Notch and Myc signaling via B cell-restricted depletion of Dnmt3a generates a consistent murine model of chronic lymphocytic leukemia
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  126. www.nature.com www.nature.com
    KMT2C deficiency promotes small cell lung cancer metastasis through DNMT3A-mediated epigenetic reprogramming
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  127. aacrjournals.org aacrjournals.org
    Predictive markers of response to neoadjuvant durvalumab with nab-paclitaxel and dose dense doxorubicin/cyclophosphamide in basal-like triple negative breast cancer
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  128. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Pan-Cancer Single-Cell Analysis Reveals the Core Factors and Pathway in Specific Cancer Stem Cells of Upper Gastrointestinal Cancer
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  129. May 2022
  130. academic.oup.com academic.oup.com
    Comprehensive profiling of myxopapillary ependymomas identifies a distinct molecular subtype with relapsing disease
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      DOI: 10.1093/neuonc/noac088

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  131. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Leveraging Allele-Specific Expression for Therapeutic Response Gene Discovery in Glioblastoma
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    Brucella activates the host RIDD pathway to subvert BLOS1-directed immune defense
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  133. aacrjournals.org aacrjournals.org
    Differential gain-of-function activity of three p53 hotspot mutants in vivo
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    Melanoma-secreted Amyloid Beta Suppresses Neuroinflammation and Promotes Brain Metastasis
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  135. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The oncoprotein BCL6 enables solid tumor cells to evade genotoxic stress
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      DOI: 10.7554/eLife.69255

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  136. Apr 2022
  137. www.nature.com www.nature.com
    Identifying a confused cell identity for esophageal squamous cell carcinoma
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  138. www.nature.com www.nature.com
    CHMP2A regulates tumor sensitivity to natural killer cell-mediated cytotoxicity
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  139. aacrjournals.org aacrjournals.org
    GFI1 cooperates with IKZF1/IKAROS to activate gene expression in T-cell acute lymphoblastic leukemia
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  140. aacrjournals.org aacrjournals.org
    Acquired resistance to EZH2 inhibitor GSK343 promotes the differentiation of human DLBCL cell lines towards an ABC-like phenotype
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  141. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Inhibition of CDK4/6 promotes CD8 T cell memory formation
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  142. link.springer.com link.springer.com
    classifieR a flexible interactive cloud-application for functional annotation of cancer transcriptomes
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  143. Mar 2022
  144. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    ZFTA-RELA Dictates Oncogenic Transcriptional Programs to Drive Aggressive Supratentorial Ependymoma
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  145. bpspubs.onlinelibrary.wiley.com bpspubs.onlinelibrary.wiley.com
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  146. Feb 2022
  147. journals.plos.org journals.plos.org
    The endoplasmic reticulum proteostasis network profoundly shapes the protein sequence space accessible to HIV envelope
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    Exosomal prostate-specific G-protein-coupled receptor induces osteoblast activity to promote the osteoblastic metastasis of prostate cancer
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  149. Jan 2022
  150. clincancerres.aacrjournals.org clincancerres.aacrjournals.org
    Modulation of the Human Pancreatic Ductal Adenocarcinoma Immune Microenvironment by Stereotactic Body Radiotherapy
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  151. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Establishment of developmental gene silencing by ordered polycomb complex recruitment in early zebrafish embryos
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    Bacterial-driven inflammation and mutant BRAF expression combine to promote murine colon tumorigenesis that is sensitive to immune checkpoint therapy
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  153. Dec 2021
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    Parity-induced changes to mammary epithelial cells control NKT cell expansion and mammary oncogenesis
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  155. Nov 2021
  156. mcr.aacrjournals.org mcr.aacrjournals.org
    SOX9 Defines Distinct Populations of Cells in SHH Medulloblastoma but Is Not Required for Math1-Driven Tumor Formation
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    CRISPR Screening of CAR T Cells and Cancer Stem Cells Reveals Critical Dependencies for Cell-Based Therapies
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  160. Oct 2021
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  162. clincancerres.aacrjournals.org clincancerres.aacrjournals.org
    Prediction of Immunotherapy Response in Melanoma through Combined Modeling of Neoantigen Burden and Immune-Related Resistance Mechanisms
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  163. Sep 2021
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    Subventricular zone/white matter microglia reconstitute the empty adult microglial niche in a dynamic wave
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  165. Aug 2021
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    Disruption of NEUROD2 causes a neurodevelopmental syndrome with autistic features via cell-autonomous defects in forebrain glutamatergic neurons
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    The RNA m6A reader YTHDF2 maintains oncogene expression and is a targetable dependency in glioblastoma stem cells
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    The Polycomb-Dependent Epigenome Controls β Cell Dysfunction, Dedifferentiation, and Diabetes
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    Lymphocyte-Specific Chromatin Accessibility Pre-determines Glucocorticoid Resistance in Acute Lymphoblastic Leukemia
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    DUX4-Induced Histone Variants H3.X and H3.Y Mark DUX4 Target Genes for Expression
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  176. Jul 2021
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    Genome-wide association and differential expression analysis of salt tolerance in <Emphasis Type="Italic">Gossypium hirsutum</Emphasis> L at the germination stage
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    DUX4-Induced Histone Variants H3.X and H3.Y Mark DUX4 Target Genes for Expression
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    Role of MYC-miR-29-B7-H3 in Medulloblastoma Growth and Angiogenesis
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    Intracellular Zn 2+ transients modulate global gene expression in dissociated rat hippocampal neurons
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  181. diabetes.diabetesjournals.org diabetes.diabetesjournals.org
    HLA Class II Antigen Processing and Presentation Pathway Components Demonstrated by Transcriptome and Protein Analyses of Islet β-Cells From Donors With Type 1 Diabetes
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    Mature Human White Adipocytes Cultured under Membranes Maintain Identity, Function, and Can Transdifferentiate into Brown-like Adipocytes
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    Deciphering Pancreatic Islet β Cell and α Cell Maturation Pathways and Characteristic Features at the Single-Cell Level
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    Stem Cell Transcription Factor FoxO Controls Microbiome Resilience in Hydra
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    foxF-1 Controls Specification of Non-body Wall Muscle and Phagocytic Cells in Planarians
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    Gain of CTCF-Anchored Chromatin Loops Marks the Exit from Naive Pluripotency
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  190. Jun 2021
  191. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome-Wide Transcriptomic Analysis of Non-Tumorigenic Tissues Reveals Aging-Related Prognostic Markers and Drug Targets in Renal Cell Carcinoma
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  192. May 2021
  193. bpspubs.onlinelibrary.wiley.com bpspubs.onlinelibrary.wiley.com
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  194. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Morphological and genomic shifts in mole-rat ‘queens’ increase fecundity but reduce skeletal integrity
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  195. clincancerres.aacrjournals.org clincancerres.aacrjournals.org
    Clinical responsiveness to All-trans Retinoic Acid is potentiated by LSD1 inhibition and associated with a quiescent transcriptome in myeloid malignancies
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    YAP1 Mediates Trametinib Resistance in Head and Neck Squamous Cell Carcinomas
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    Purkinje neurons with loss of STIM1 exhibit age-dependent changes in gene expression and synaptic components
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      DOI: 10.1523/JNEUROSCI.2401-20.2021

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  198. www.sciencedirect.com www.sciencedirect.com
    Repetitive Elements Trigger RIG-I-like Receptor Signaling that Regulates the Emergence of Hematopoietic Stem and Progenitor Cells
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      DOI: 10.1016/j.immuni.2020.10.007

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  200. Feb 2021
  201. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Identification of regenerative processes in neonatal spinal cord injury in the opossum (Monodelphis domestica), a transcriptomic study
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  202. www.cell.com www.cell.com
    Distinct Transcriptional Responses across Tissue-Resident Macrophages to Short-Term and Long-Term Metabolic Challenge
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  203. cancerres.aacrjournals.org cancerres.aacrjournals.org
    Transcriptional Activation of MYC-Induced Genes by GCN5 Promotes B-cell Lymphomagenesis
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  204. Dec 2020
  205. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  206. Sep 2020
  207. www.cell.com www.cell.com
    Distinct Transcriptional Responses across Tissue-Resident Macrophages to Short-Term and Long-Term Metabolic Challenge
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  208. www.sciencedirect.com www.sciencedirect.com
    Postprandial Hypoglycemia in Patients after Gastric Bypass Surgery Is Mediated by Glucose-Induced IL-1β
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      DOI: 10.1016/j.cmet.2020.02.013

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  209. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Aire-dependent genes undergo Clp1-mediated 3’UTR shortening associated with higher transcript stability in the thymus
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      DOI: 10.7554/eLife.52985

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  210. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Regionally specified human pluripotent stem cell-derived astrocytes exhibit different molecular signatures and functional properties
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      DOI: 10.1242/dev.170910

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  211. elifesciences.org elifesciences.org
    HNF1A is a novel oncogene that regulates human pancreatic cancer stem cell properties
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  212. Jan 2020
  213. www.sciencedirect.com www.sciencedirect.com
    Discovery of Next-Generation Antimicrobials through Bacterial Self-Screening of Surface-Displayed Peptide Libraries
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      DOI: 10.1016/j.cell.2017.12.009

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    sciencedirect.com/science/article/pii/S0092867417314514
  214. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Nuclear receptor NR4A is required for patterning at the ends of the planarian anterior-posterior axis
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    1. scibot 13 Jan 2020
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      DOI: 10.7554/eLife.42015

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    Identification and Analyses of Extra-Cranial and Cranial Rhabdoid Tumor Molecular Subgroups Reveal Tumors with Cytotoxic T Cell Infiltration
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      DOI: 10.1016/j.celrep.2019.10.013

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  216. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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      DOI: 10.1093/nar/gky232

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  217. Apr 2019
  218. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Transcriptomic analysis of the hippocampus from six inbred strains of mice suggests a basis for sex‐specific susceptibility and severity of neurological disorders
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  219. Nov 2018
  220. www.sciencedirect.com www.sciencedirect.com
    Identification of piRNA Binding Sites Reveals the Argonaute Regulatory Landscape of the C. elegans Germline
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  221. www.sciencedirect.com www.sciencedirect.com
    Dampened STING-Dependent Interferon Activation in Bats
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    sciencedirect.com/science/article/pii/S1931312818300416
  222. www.sciencedirect.com www.sciencedirect.com
    Impairing L-Threonine Catabolism Promotes Healthspan through Methylglyoxal-Mediated Proteohormesis
    1
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  223. www.sciencedirect.com www.sciencedirect.com
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  224. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Stage-Specific Transcription Factors Drive Astrogliogenesis by Remodeling Gene Regulatory Landscapes
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  225. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Enhanced ER proteostasis and temperature differentially impact the mutational tolerance of influenza hemagglutinin
    1
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    ZFX Mediates Non-canonical Oncogenic Functions of the Androgen Receptor Splice Variant 7 in Castrate-Resistant Prostate Cancer
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  228. www.sciencedirect.com www.sciencedirect.com
    Small Molecule Targeting of Specific BAF (mSWI/SNF) Complexes for HIV Latency Reversal
    1
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  229. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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    A Quick HYL1-Dependent Reactivation of MicroRNA Production Is Required for a Proper Developmental Response after Extended Periods of Light Deprivation
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  231. onlinelibrary.wiley.com onlinelibrary.wiley.com
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    onlinelibrary.wiley.com/doi/full/10.1002/jcb.26836
  232. europepmc.org europepmc.org
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  233. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Stable STIM1 Knockdown in Self-Renewing Human Neural Precursors Promotes Premature Neural Differentiation
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  234. www.sciencedirect.com www.sciencedirect.com
    Direct Control of SPEECHLESS by PIF4 in the High-Temperature Response of Stomatal Development
    1
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      DESeq

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  235. academic.oup.com academic.oup.com
    Improved de novo genome assembly and analysis of the Chinese cucurbit Siraitia grosvenorii, also known as monk fruit or luo-han-guo
    1
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  236. elifesciences.org elifesciences.org
    Epigenetic drift of H3K27me3 in aging links glycolysis to healthy longevity in Drosophila
    1
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  237. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The Polycomb-Dependent Epigenome Controls β Cell Dysfunction, Dedifferentiation, and Diabetes
    1
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  238. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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    Salmonella Typhi Colonization Provokes Extensive Transcriptional Changes Aimed at Evading Host Mucosal Immune Defense During Early Infection of Human Intestinal Tissue
    1
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      DESeq

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