337 Matching Annotations
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  2. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Proteomic and functional comparison between human induced and embryonic stem cells
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    1. scibot 22 Dec 2024
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      DOI: 10.7554/eLife.92025

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    pmc.ncbi.nlm.nih.gov/articles/PMC11563575/
  3. Dec 2024
  4. www.sciencedirect.com www.sciencedirect.com
    Integrated proteomic and transcriptomic landscape of human placenta in small for gestational age infants
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    1. scibot 14 Dec 2024
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    sciencedirect.com/science/article/pii/S2589004224026488
  5. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    PAD2-Mediated Citrullination Contributes to Efficient Oligodendrocyte Differentiation and Myelination
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    1. scibot 14 Dec 2024
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      DOI: 10.1016/j.celrep.2019.03.108

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    Dual BACH1 regulation by complementary SCF-type E3 ligases
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    1. scibot 10 Dec 2024
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  7. Nov 2024
  8. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Zika virus remodels and hijacks IGF2BP2 ribonucleoprotein complex to promote viral replication organelle biogenesis
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    1. scibot 26 Nov 2024
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      DOI: 10.7554/eLife.94347

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    Autophagy-dependent splicing control directs translation toward inflammation during senescence
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    sciencedirect.com/science/article/pii/S1534580724006270
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    Time-resolved proximity proteomics uncovers a membrane tension-sensitive caveolin-1 interactome at the rear of migrating cells
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    1. scibot 07 Nov 2024
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      DOI: 10.7554/eLife.85601

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    pmc.ncbi.nlm.nih.gov/articles/PMC11509677/
  11. Oct 2024
  12. www.biorxiv.org www.biorxiv.org
    MITF Targets in Gastrointestinal Stromal Tumors: Implications in Autophagy and Extracellular Vesicle Secretion
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      DOI: 10.1101/2024.09.10.612253

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    biorxiv.org/content/10.1101/2024.09.10.612253v1
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    Systematic Analysis of Intronic miRNAs Reveals Cooperativity within the Multicomponent FTX Locus to Promote Colon Cancer Development
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    1. scibot 02 Oct 2024
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      DOI: 10.1158/0008-5472.CAN-20-1406

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    aacrjournals.org/cancerres/article/81/5/1308/649526/Systematic-Analysis-of-Intronic-miRNAs-Reveals
  14. Sep 2024
  15. dx.doi.org dx.doi.org
    PCSK1N as a Tumor Size Marker and an ER Stress Response Protein in Corticotroph Pituitary Adenomas
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    1. scibot 29 Sep 2024
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      DOI: 10.1210/clinem/dgae643

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    Multidirectional effect of low-intensity electrical myostimulation on gene expression and phenotype in thigh and calf muscles after one week of disuse
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    1. scibot 28 Sep 2024
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      DOI: 10.1101/2024.09.18.613609

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  17. www.science.org www.science.org
    Signal flow in the NMDA receptor–dependent phosphoproteome regulates postsynaptic plasticity for aversive learning
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      DOI: 10.1126/scisignal.ado9852

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    The Proteogenomics of Prostate Cancer Radioresistance
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    1. scibot 25 Sep 2024
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  19. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comprehensive Proteogenomic Profiling Reveals the Molecular Characteristics of Colorectal Cancer at Distinct Stages of Progression
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      DOI: 10.1158/0008-5472.CAN-23-1878

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    Recycled melanoma-secreted melanosomes regulate tumor-associated macrophage diversification
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    1. scibot 12 Sep 2024
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      DOI: 10.1038/s44318-024-00103-7

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  21. aacrjournals.org aacrjournals.org
    Aberrant L-Fucose accumulation and increased core fucosylation are metabolic liabilities in mesenchymal glioblastoma
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    1. scibot 12 Sep 2024
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      DOI: 10.1158/0008-5472.CAN-22-0677

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    aacrjournals.org/cancerres/article/83/2/195/715074/Aberrant-L-Fucose-Accumulation-and-Increased-Core
  22. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Activation of Cell-Intrinsic Signaling in CAR-T Cells via a Chimeric IL7R Domain
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  23. Aug 2024
  24. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A proteome-wide quantitative platform for nanoscale spatially resolved extraction of membrane proteins into native nanodiscs
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      DOI: 10.1101/2024.02.10.579775

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    Rapid phagosome isolation enables unbiased multiomic analysis of human microglial phagosomes
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      DOI: 10.1016/j.immuni.2024.07.019

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    sciencedirect.com/science/article/pii/S1074761324003686
  26. www.tandfonline.com www.tandfonline.com
    Drought-induced molecular changes in crown of various barley phytohormone mutants
    1
    1. scibot 18 Aug 2024
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      DOI: 10.1080/15592324.2024.2371693

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  27. www.nature.com www.nature.com
    Control of mitophagy initiation and progression by the TBK1 adaptors NAP1 and SINTBAD
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    1. scibot 13 Aug 2024
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      DOI: 10.1038/s41594-024-01338-y

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  28. pubs.acs.org pubs.acs.org
    Shotgun Proteomic-Based Approach with a Q-Exactive Hybrid Quadrupole-Orbitrap High-Resolution Mass Spectrometer for Protein Adductomics on a 3D Human Brain Tumor Neurospheroid Culture Model: The Identification of Adduct Formation in Calmodulin-Dependent Protein Kinase-2 and Annexin-A1 Induced by Pesticide Mixture
    1
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      DOI: 10.1021/acs.jproteome.3c00484

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    pubs.acs.org/doi/full/10.1021/acs.jproteome.3c00484
  29. Jul 2024
  30. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    N-Myristoyltransferase Inhibition causes Mitochondrial Iron Overload and Parthanatos in TIM17A-dependent Aggressive Lung Carcinoma
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    1. scibot 27 Jul 2024
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      DOI: 10.1158/2767-9764.CRC-23-0428

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  31. 52.53.155.43 52.53.155.43
    1-s2.0-S2589004224017851-main-html.html
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      DOI: 10.1016/j.isci.2024.110560

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    52.53.155.43/28f1f0cd51770599356cfb72d036c0e468b38b34/1-s2.0-S2589004224017851-main-html.html
  32. www.cell.com www.cell.com
    Stress-dependent condensate formation regulated by the ubiquitin-related modifier Urm1
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      DOI: 10.1016/j.cell.2024.06.009

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    cell.com/cell/fulltext/S0092-8674(24)00649-4
  33. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Inhalation of hydrogen gas mitigates sevoflurane-induced neuronal apoptosis in the neonatal cortex and is associated with changes in protein phosphorylation
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      DOI: 10.1111/jnc.16142

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  34. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Biomarker Identification and Risk Prediction Model Development for Differentiated Thyroid Carcinoma Lung Metastasis Based on Primary Lesion Proteomics
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      DOI: 10.1158/1078-0432.CCR-23-3806

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  35. www.sciencedirect.com www.sciencedirect.com
    Proteomic analysis reveals a PLK1-dependent G2/M degradation program and a role for AKAP2 in coordinating the mitotic cytoskeleton
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      DOI: 10.1016/j.celrep.2024.114510

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    sciencedirect.com/science/article/pii/S2211124724008398
  36. www.cell.com www.cell.com
    ADP-ribosylome analysis reveals homogeneous DNA-damage-induced serine ADP-ribosylation across wild-type and BRCA-mutant breast cancer cell lines
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      DOI: 10.1016/j.celrep.2024.114433

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    cell.com/cell-reports/fulltext/S2211-1247(24)00762-9
  37. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Drought-induced molecular changes in crown of various barley phytohormone mutants
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      DOI: 10.1080/15592324.2024.2371693

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    ncbi.nlm.nih.gov/pmc/articles/PMC11210921/
  38. Jun 2024
  39. www.sciencedirect.com www.sciencedirect.com
    Islet cell stress induced by insulin-degrading enzyme deficiency promotes regeneration and protection from autoimmune diabetes
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      DOI: 10.1016/j.isci.2024.109929

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    sciencedirect.com/science/article/pii/S2589004224011519
  40. May 2024
  41. www.sciencedirect.com www.sciencedirect.com
    CDK7 kinase activity promotes RNA polymerase II promoter escape by facilitating initiation factor release
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      DOI: 10.1016/j.molcel.2024.05.007

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    sciencedirect.com/science/article/pii/S1097276524004003
  42. aacrjournals.org aacrjournals.org
    CircPDIA4 induces gastric cancer progression by promoting ERK1/2 activation and enhancing biogenesis of oncogenic circRNAs
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      DOI: 10.1158/0008-5472.CAN-22-1923

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    aacrjournals.org/cancerres/article/83/4/538/716437/CircPDIA4-Induces-Gastric-Cancer-Progression-by
  43. www.sciencedirect.com www.sciencedirect.com
    Quantitative proteomics reveals CLR interactome in primary human cells
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      DOI: 10.1016/j.jbc.2024.107399

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    sciencedirect.com/science/article/pii/S0021925824019008
  44. www.sciencedirect.com www.sciencedirect.com
    Protocol for affinity purification-mass spectrometry interactome profiling in larvae of Drosophila melanogaster
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      DOI: 10.1016/j.xpro.2024.103064

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    sciencedirect.com/science/article/pii/S2666166724002296
  45. www.sciencedirect.com www.sciencedirect.com
    Autophagy preferentially degrades non-fibrillar polyQ aggregates
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      DOI: 10.1016/j.molcel.2024.04.018

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    sciencedirect.com/science/article/pii/S1097276524003836
  46. www.sciencedirect.com www.sciencedirect.com
    The MYCN oncoprotein is an RNA-binding accessory factor of the nuclear exosome targeting complex
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      DOI: 10.1016/j.molcel.2024.04.007

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    sciencedirect.com/science/article/pii/S1097276524002855
  47. elifesciences.org elifesciences.org
    Ribosome subunit attrition and activation of the p53–MDM4 axis dominate the response of MLL-rearranged cancer cells to WDR5 WIN site inhibition
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      DOI: 10.7554/eLife.90683

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    elifesciences.org/articles/90683
  48. www.sciencedirect.com www.sciencedirect.com
    Molecular targets of glucocorticoids that elucidate their therapeutic efficacy in aggressive lymphomas
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      DOI: 10.1016/j.ccell.2024.04.007

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    sciencedirect.com/science/article/pii/S1535610824001314
  49. Apr 2024
  50. www.sciencedirect.com www.sciencedirect.com
    Systematic analysis of proteome turnover in an organoid model of pancreatic cancer by dSILO
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    Identification of hypoxic macrophages in glioblastoma with therapeutic potential for vasculature normalization
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    Mesothelin Secretion by Pancreatic Cancer Cells Co-opts Macrophages and Promotes Metastasis
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    Proteomic analysis of the serum in dogs with pulmonary hypertension secondary to myxomatous mitral valve disease: the preliminary study
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    Dynamic localization of the chromosomal passenger complex in trypanosomes is controlled by the orphan kinesins KIN-A and KIN-B
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    Lysosomal damage sensing and lysophagy initiation by SPG20-ITCH
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    Acetyl-CoA carboxylase obstructs CD8+ T cell lipid utilization in the tumor microenvironment
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    Structure of the plant plastid-encoded RNA polymerase
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    Origin of eukaryotic-like Vps23 shapes an ancient functional interplay between ESCRT and ubiquitin system in Asgard archaea
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    Parkinson’s VPS35[D620N] mutation induces LRRK2-mediated lysosomal association of RILPL1 and TMEM55B
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    A clinically applicable connectivity signature for glioblastoma includes the tumor network driver CHI3L1
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    Targeting N-linked Glycosylation for the Therapy of Aggressive Lymphomas
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  64. Jan 2024
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    Comparative Analysis of Various Spider Silks in Regard to Nerve Regeneration: Material Properties and Schwann Cell Response
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    Mapping of multiple neurotransmitter receptor subtypes and distinct protein complexes to the connectome
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    Temporal landscape of mitochondrial proteostasis governed by the UPRmt
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    Parkinson’s VPS35[D620N] mutation induces LRRK2-mediated lysosomal association of RILPL1 and TMEM55B
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    Response to Bruton’s tyrosine kinase inhibitors in aggressive lymphomas linked to chronic selective autophagy
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  70. Dec 2023
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    RAF-like protein kinases mediate a deeply conserved, rapid auxin response
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    Mutational impact of APOBEC3A and APOBEC3B in a human cell line and comparisons to breast cancer
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    Shotgun Proteomic-Based Approach with a Q-Exactive Hybrid Quadrupole-Orbitrap High-Resolution Mass Spectrometer for Protein Adductomics on a 3D Human Brain Tumor Neurospheroid Culture Model: The Identification of Adduct Formation in Calmodulin-Dependent Protein Kinase-2 and Annexin-A1 Induced by Pesticide Mixture
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    A proteomic insight reveals the role of food-associated Lactiplantibacillus plantarum C9O4 in reverting intestinal inflammation
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    RNF14-dependent atypical ubiquitylation promotes translation-coupled resolution of RNA-protein crosslinks
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    Differential Proteome Profiling Analysis under Pesticide Stress by the Use of a Nano-UHPLC-MS/MS Untargeted Proteomic-Based Approach on a 3D-Developed Neurospheroid Model: Identification of Protein Interactions, Prognostic Biomarkers, and Potential Therapeutic Targets in Human IDH Mutant High-Grade Gliomas
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    Analysis of CDPK1 targets identifies a trafficking adaptor complex that regulates microneme exocytosis in Toxoplasma
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  81. Sep 2023
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    Direct recruitment of Mis18 to interphase spindle pole bodies promotes CENP-A chromatin assembly
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    MARCH7-mediated ubiquitination decreases the solubility of ATG14 to inhibit autophagy
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    Proteomic analysis of the human hippocampus identifies neuronal pentraxin 1 (NPTX1) as synapto-axonal target in late-stage Parkinson's disease
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  87. Jul 2023
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    Nucleocytoplasmic mRNA redistribution accompanies RNA binding protein mislocalization in ALS motor neurons and is restored by VCP ATPase inhibition
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    Mechanism of orphan subunit recognition during assembly quality control
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    Identification of putative reader proteins of 5-methylcytosine and its derivatives in Caenorhabditis elegans RNA
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    Extracellular Vesicle Secretion by Leukemia Cells In Vivo Promotes CLL Progression by Hampering Antitumor T-cell Responses
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  92. www.biorxiv.org www.biorxiv.org
    Parkinson’s VP535[D620N] mutation induces LRRK2 mediated lysosomal association of RILPL1 and TMEM55B
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  93. Jun 2023
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    ROTACs leverage signaling-incompetent R-spondin for targeted protein degradation
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    ROS Induction Targets Persister Cancer Cells with Low Metabolic Activity in NRAS-Mutated Melanoma
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    The Rab5 effector FERRY links early endosomes with mRNA localization
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    Proteomics of immune cells from liver tumors reveals immunotherapy targets
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    Unconventional initiation of PINK1/Parkin mitophagy by Optineurin
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    BAP1 loss is associated with higher ASS1 expression in epithelioid mesothelioma: implications for therapeutic stratification.
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    N-Terminomic Changes of Neurons During Excitotoxicity Reveal Proteolytic Events Associated with Synaptic Dysfunctions and Potential Targets for Neuroprotection
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    Lysosomal trafficking of the glucose transporter GLUT1 requires sequential regulation by TXNIP and ubiquitin
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    Proteomics profiling of vitreous humor reveals complement and coagulation components, adhesion factors, and neurodegeneration markers as discriminatory biomarkers of vitreoretinal eye diseases
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    Caveolae sense oxidative stress through membrane lipid peroxidation and cytosolic release of CAVIN1 to regulate NRF2
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    The AAA+ chaperone VCP disaggregates Tau fibrils and generates aggregate seeds in a cellular system
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    RNA-DNA hybrids prevent resection at dysfunctional telomeres
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  117. Jan 2023
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    A mitochondrion-free eukaryote contains proteins capable of import into an exogenous mitochondrion-related organelle
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    Human Papillomavirus 42 Drives Digital Papillary Adenocarcinoma and Elicits a Germ Cell–like Program Conserved in HPV-Positive Cancers
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    EXOC4 Promotes Diffuse-Type Gastric Cancer Metastasis via Activating FAK Signal
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    Antitumor Activity of the Novel BTK Inhibitor TG-1701 Is Associated with Disruption of Ikaros Signaling in Patients with B-cell Non–Hodgkin Lymphoma
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    Neoadjuvant chemotherapy is associated with an altered metabolic profile and increased cancer stemness in patients with pancreatic ductal adenocarcinoma
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    SMYD3 Impedes Small Cell Lung Cancer Sensitivity to Alkylation Damage through RNF113A Methylation–Phosphorylation Cross-talk
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  126. Dec 2022
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    Epidermal stratification requires retromer-mediated desmoglein-1 recycling
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  130. Nov 2022
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    Long non-coding RNA PCAT19 safeguards DNA in quiescent endothelial cells by preventing uncontrolled phosphorylation of RPA2
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  134. Sep 2022
  135. www.sciencedirect.com www.sciencedirect.com
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    Convergent cerebrospinal fluid proteomes and metabolic ontologies in humans and animal models of Rett syndrome
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  139. Aug 2022
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    Substrate spectrum of PPM1D in the cellular response to DNA double-strand breaks
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  142. Jul 2022
  143. bpspubs.onlinelibrary.wiley.com bpspubs.onlinelibrary.wiley.com
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  144. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Differentiated glioma cell-derived fibromodulin activates integrin-dependent Notch signaling in endothelial cells to promote tumor angiogenesis and growth
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    Src activation in lipid rafts confers epithelial cells with invasive potential to escape from apical extrusion during cell competition
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  146. Jun 2022
  147. aacrjournals.org aacrjournals.org
    Phosphorylation of SHP2 at Tyr62 enables acquired resistance to SHP2 allosteric inhibitors in FLT3-ITD-driven AML
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    Proteomic-Based Machine Learning Analysis Reveals PYGB as a Novel Immunohistochemical Biomarker to Distinguish Inverted Urothelial Papilloma From Low-Grade Papillary Urothelial Carcinoma With Inverted Growth
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    Dual roles for ATP in the regulation of phase separated protein aggregates in Xenopus oocyte nucleoli
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    Extracellular Vesicles Induce an Aggressive Phenotype in Luminal Breast Cancer Cells Via PKM2 Phosphorylation
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    Acute depletion of the ARID1A subunit of SWI/SNF complexes reveals distinct pathways for activation and repression of transcription
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    Pro-inflammatory β cell small extracellular vesicles induce β cell failure through activation of the CXCL10/CXCR3 axis in diabetes
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    Dynamic bi-directional phosphorylation events associated with the reciprocal regulation of synapses during homeostatic up- and down-scaling
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    SHP2-Mediated Inhibition of DNA Repair Contributes to cGAS–STING Activation and Chemotherapeutic Sensitivity in Colon Cancer
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    Sex Differences in the Ventral Tegmental Area and Nucleus Accumbens Proteome at Baseline and Following Nicotine Exposure
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    DYRK1A Overexpression Alters Cognition and Neural-Related Proteomic Pathways in the Hippocampus That Are Rescued by Green Tea Extract and/or Environmental Enrichment
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    Proteomic Exploration of Plasma Exosomes and Other Small Extracellular Vesicles in Pediatric Hodgkin Lymphoma: A Potential Source of Biomarkers for Relapse Occurrence
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