803 Matching Annotations
  1. Apr 2023
  2. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Molecular mechanisms underlying hematophagia revealed by comparative analyses of leech genomes
    1
    1. scibot 14 Apr 2023
      RRID:SCR_002105

      DOI: 10.1093/gigascience/giad023

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    ncbi.nlm.nih.gov/pmc/articles/PMC10087013/
  3. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Structurally Complex Osteosarcoma Genomes Exhibit Limited Heterogeneity within Individual Tumors and across Evolutionary Time
    1
    1. scibot 14 Apr 2023
      RRID:SCR_002105

      DOI: 10.1158/2767-9764.CRC-22-0348

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    ncbi.nlm.nih.gov/pmc/articles/PMC10093779/
  4. academic.oup.com academic.oup.com
    GEN-ERA toolbox: unified and reproducible workflows for research in microbial genomics
    1
    1. scibot 11 Apr 2023
      SCR_002105

      DOI: 10.1093/gigascience/giad022

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad022/7111624
  5. academic.oup.com academic.oup.com
    A chromosome-scale high-contiguity genome assembly of the cheetah (Acinonyx jubatus)
    1
    1. scibot 06 Apr 2023
      RRID:SCR_002105

      DOI: 10.1093/jhered/esad015

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    academic.oup.com/jhered/advance-article/doi/10.1093/jhered/esad015/7069302
  6. www.sciencedirect.com www.sciencedirect.com
    Histone phosphorylation integrates the hepatic glucagon-PKA-CREB gluconeogenesis program in response to fasting
    1
    1. scibot 06 Apr 2023
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      DOI: 10.1016/j.molcel.2023.02.007

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    sciencedirect.com/science/article/pii/S1097276523001028
  7. Mar 2023
  8. academic.oup.com academic.oup.com
    Resequencing of a Pekin duck breeding population provides insights into the genomic response to short-term artificial selection
    1
    1. scibot 30 Mar 2023
      RRID:SCR_002105

      DOI: 10.1093/gigascience/giad016

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad016/7086661
  9. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Atria: an ultra-fast and accurate trimmer for adapter and quality trimming
    1
    1. scibot 29 Mar 2023
      RRID:SCR_002105

      DOI: 10.46471/gigabyte.31

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    ncbi.nlm.nih.gov/pmc/articles/PMC10038132/
  10. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the roundjaw bonefish (Albula glossodonta), a vulnerable circumtropical sportfish
    1
    1. scibot 29 Mar 2023
      RRID:SCR_002105

      DOI: 10.46471/gigabyte.44

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    ncbi.nlm.nih.gov/pmc/articles/PMC10038134/
  11. www.sciencedirect.com www.sciencedirect.com
    Stepwise activities of mSWI/SNF family chromatin remodeling complexes direct T cell activation and exhaustion
    1
    1. scibot 23 Mar 2023
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      DOI: 10.1016/j.molcel.2023.02.026

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    sciencedirect.com/science/article/pii/S1097276523001533
  12. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the deep-sea coral Lophelia pertusa
    1
    1. scibot 22 Mar 2023
      RRID:SCR_002105

      DOI: 10.46471/gigabyte.78

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    ncbi.nlm.nih.gov/pmc/articles/PMC10022433/
  13. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    ViReMa: a virus recombination mapper of next-generation sequencing data characterizes diverse recombinant viral nucleic acids
    1
    1. scibot 22 Mar 2023
      RRID:SCR_002105

      DOI: 10.1093/gigascience/giad009

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    ncbi.nlm.nih.gov/pmc/articles/PMC10025937/
  14. europepmc.org europepmc.org
    Jarid2 promotes temporal progression of retinal progenitors via repression of Foxp1
    1
    1. scibot 16 Mar 2023
      RRID:SCR_002105

      DOI: 10.1016/j.celrep.2023.112237

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    europepmc.org/article/med/36924502
  15. link.springer.com link.springer.com
    Expression of down-regulated ERV LTR elements associates with immune activation in human small-cell lung cancers
    1
    1. scibot 15 Mar 2023
      RRID:SCR_002105

      DOI: 10.1186/s13100-023-00290-w

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    link.springer.com/article/10.1186/s13100-023-00290-w
  16. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Integrated, Longitudinal Analysis of Cell-free DNA in Uveal Melanoma
    1
    1. scibot 04 Mar 2023
      RRID:SCR_002105

      DOI: 10.1158/2767-9764.CRC-22-0456

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    ncbi.nlm.nih.gov/pmc/articles/PMC9973415/
  17. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genome of the mustard hill coral, Porites astreoides
    1
    1. scibot 02 Mar 2023
      RRID:SCR_002105

      DOI: 10.46471/gigabyte.65

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    ncbi.nlm.nih.gov/pmc/articles/PMC9693771/
  18. www.sciencedirect.com www.sciencedirect.com
    A cell-type-specific alternative splicing regulator shapes synapse properties in a trans-synaptic manner
    1
    1. scibot 02 Mar 2023
      SCR_002105

      DOI: 10.1016/j.celrep.2023.112173

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    sciencedirect.com/science/article/pii/S2211124723001845
  19. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic Resources for the North American Water Vole (Microtus richardsoni) and the Montane Vole (Microtus montanus)
    1
    1. scibot 02 Mar 2023
      RRID:SCR_002105

      DOI: 10.46471/gigabyte.19

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    ncbi.nlm.nih.gov/pmc/articles/PMC9631978/
  20. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A reference genome for the critically endangered woylie, Bettongia penicillata ogilbyi
    1
    1. scibot 02 Mar 2023
      RRID:SCR_002105

      DOI: 10.46471/gigabyte.35

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650285/
  21. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    De novo chromosome-length assembly of the mule deer (Odocoileus hemionus) genome
    1
    1. scibot 02 Mar 2023
      RRID:SCR_002105

      DOI: 10.46471/gigabyte.34

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650288/
  22. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-scale draft genome sequence of horsegram (Macrotyloma uniflorum)
    1
    1. scibot 02 Mar 2023
      RRID:SCR_002105

      DOI: 10.46471/gigabyte.30

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650294/
  23. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The first Antechinus reference genome provides a resource for investigating the genetic basis of semelparity and age-related neuropathologies
    1
    1. scibot 02 Mar 2023
      RRID:SCR_002105

      DOI: 10.46471/gigabyte.7

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    ncbi.nlm.nih.gov/pmc/articles/PMC9631953/
  24. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A draft genome assembly of the eastern banjo frog Limnodynastes dumerilii dumerilii (Anura: Limnodynastidae)
    1
    1. scibot 02 Mar 2023
      RRID:SCR_002105

      DOI: 10.46471/gigabyte.2

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    ncbi.nlm.nih.gov/pmc/articles/PMC9632003/
  25. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A genome assembly of the Atlantic chub mackerel (Scomber colias): a valuable teleost fishing resource
    1
    1. scibot 02 Mar 2023
      RRID:SCR_002105

      DOI: 10.46471/gigabyte.40

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650269/
  26. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Long-read assemblies reveal structural diversity in genomes of organelles – an example with Acacia pycnantha
    1
    1. scibot 02 Mar 2023
      RRID:SCR_002105

      DOI: 10.46471/gigabyte.36

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650277/
  27. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality draft genome for Melaleuca alternifolia (tea tree): a new platform for evolutionary genomics of myrtaceous terpene-rich species
    1
    1. scibot 02 Mar 2023
      RRID:SCR_002105

      DOI: 10.46471/gigabyte.28

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650293/
  28. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Optimizing experimental design for genome sequencing and assembly with Oxford Nanopore Technologies
    1
    1. scibot 02 Mar 2023
      RRID:SCR_002105

      DOI: 10.46471/gigabyte.27

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650304/
  29. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genome of a giant (trevally): Caranx ignobilis
    1
    1. scibot 02 Mar 2023
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      DOI: 10.46471/gigabyte.67

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    ncbi.nlm.nih.gov/pmc/articles/PMC9694125/
  30. Feb 2023
  31. link.springer.com link.springer.com
    Genes critical for development and differentiation of dopaminergic neurons are downregulated in Parkinson’s disease
    1
    1. scibot 25 Feb 2023
      RRID:SCR_002105

      DOI: 10.1007/s00702-023-02604-x

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    link.springer.com/article/10.1007/s00702-023-02604-x
  32. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of Musa beccarii shows extensive chromosomal rearrangements and genome expansion during evolution of Musaceae genomes
    1
    1. scibot 23 Feb 2023
      RRID:SCR_002105

      DOI: 10.1093/gigascience/giad005

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    ncbi.nlm.nih.gov/pmc/articles/PMC9941839/
  33. www.sciencedirect.com www.sciencedirect.com
    A chromosome-level genome assembly of Ostrea denselamellosa provides initial insights into its evolution
    1
    1. scibot 16 Feb 2023
      RRID:SCR_002105

      DOI: 10.1016/j.ygeno.2023.110582

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    sciencedirect.com/science/article/pii/S0888754323000265
  34. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Loss of PBRM1 alters promoter histone modifications and activates ALDH1A1 to drive renal cell carcinoma
    1
    1. scibot 09 Feb 2023
      RRID:SCR_002105

      DOI: 10.1158/1541-7786.MCR-21-1039

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    ncbi.nlm.nih.gov/pmc/articles/PMC9357026/
  35. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of goose provides insight into the adaptation and growth of local goose breeds
    1
    1. scibot 08 Feb 2023
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      DOI: 10.1093/gigascience/giad003

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad003/7025323
  36. 52.53.155.43 52.53.155.43
    Transcription factor HNF1β controls a transcriptional network regulating kidney cell structure and tight junction integrity
    1
    1. scibot 03 Feb 2023
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      DOI: 10.1152/ajprenal.00199.2022

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    52.53.155.43/030fdb0084c6620549dc8628e91b75020cfa4ad3/ajprenal.00199.2022-html.html
  37. academic.oup.com academic.oup.com
    Expanded MutaT7 toolkit efficiently and simultaneously accesses all possible transition mutations in bacteria
    1
    1. scibot 02 Feb 2023
      RRID:SCR_002105

      DOI: 10.1093/nar/gkad003

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    academic.oup.com/nar/advance-article/doi/10.1093/nar/gkad003/7009119
  38. Jan 2023
  39. www.nature.com www.nature.com
    A chromosome-level genome assembly of Plantago ovata
    1
    1. scibot 31 Jan 2023
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      DOI: 10.1038/s41598-022-25078-5

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    nature.com/articles/s41598-022-25078-5
  40. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome Reporting for Healthy Populations—Pipeline for Genomic Screening from the GENCOV COVID‐19 Study
    1
    1. scibot 28 Jan 2023
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      DOI: 10.1002/cpz1.534

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    ncbi.nlm.nih.gov/pmc/articles/PMC9874607/
  41. www.sciencedirect.com www.sciencedirect.com
    Enrichment of oral-derived bacteria in inflamed colorectal tumors and distinct associations of Fusobacterium in the mesenchymal subtype
    1
    1. scibot 27 Jan 2023
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      DOI: 10.1016/j.xcrm.2023.100920

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    sciencedirect.com/science/article/pii/S2666379123000058
  42. www.sciencedirect.com www.sciencedirect.com
    Centromeres as universal hotspots of DNA breakage, driving RAD51-mediated recombination during quiescence
    1
    1. scibot 26 Jan 2023
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      DOI: 10.1016/j.molcel.2023.01.004

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    sciencedirect.com/science/article/pii/S1097276523000047
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic view of the diversity and functional role of archaea and bacteria in the skeleton of the reef-building corals Porites lutea and Isopora palifera
    1
    1. scibot 26 Jan 2023
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      DOI: 10.1093/gigascience/giac127

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    ncbi.nlm.nih.gov/pmc/articles/PMC9868349/
  44. www.biorxiv.org www.biorxiv.org
    A chromosome-scale assembly for tetraploid sour cherry (Prunus cerasus L.) ‘Montmorency’ identifies three distinct ancestral Prunus genomes
    1
    1. scibot 20 Jan 2023
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      DOI: 10.1101/2023.01.10.523438

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    biorxiv.org/content/10.1101/2023.01.10.523438v1
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Human Papillomavirus 42 Drives Digital Papillary Adenocarcinoma and Elicits a Germ Cell–like Program Conserved in HPV-Positive Cancers
    1
    1. scibot 15 Jan 2023
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      DOI: 10.1158/2159-8290.CD-22-0489

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    Inhibition of the PI3K/AKT/mTOR signaling promotes an M1 macrophage switch by repressing the ATF3-CXCL8 axis in Ewing sarcoma
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    Chromosome-level genome assembly of Dastarcus helophoroides provides insights into CYP450 genes expression upon insecticide exposure
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  48. Dec 2022
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    Near-chromosomal de novo assembly of Bengal tiger genome reveals genetic hallmarks of apex predation
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    Efficient Correction of Oncogenic KRAS and TP53 Mutations through CRISPR Base Editing
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    Protocol to analyze population structure and migration history based on human genome variation data
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    annotate_my_genomes: an easy-to-use pipeline to improve genome annotation and uncover neglected genes by hybrid RNA sequencing
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    Relative infectivity of the SARS-CoV-2 Omicron variant in human alveolar cells
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    Essential role of MESP1-RING1A complex in cardiac differentiation
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    Molecular and anatomical characterization of parabrachial neurons and their axonal projections
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    Derivation of nociceptive sensory neurons from hiPSCs with early patterning and temporally controlled NEUROG2 overexpression
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    High-quality genome assembles from key Hawaiian coral species
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    Transcription factor antagonism regulates heterogeneity in embryonic stem cell states
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    Reconstructing mutational lineages in breast cancer by multi-patient-targeted single-cell DNA sequencing
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    FOXR2 is an epigenetically regulated pan-cancer oncogene that activates ETS transcriptional circuits
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  64. Oct 2022
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    Interleukin-33-activated neuropeptide CGRP-producing memory Th2 cells cooperate with somatosensory neurons to induce conjunctival itch
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    P2Y6 receptor-mediated signaling amplifies TLR-induced pro-inflammatory responses in microglia
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    A cis-regulatory lexicon of DNA motif combinations mediating cell-type-specific gene regulation
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  69. Sep 2022
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    PU.1-dependent enhancer inhibition separates Tet2-deficient hematopoiesis from malignant transformation
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    Comprehensive association analysis of speech recognition thresholds after cisplatin-based chemotherapy in survivors of adult-onset cancer
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    Identification of candidate sex‐specific genomic regions in male and female Asian arowana genomes
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    Acquired semi-squamatization during chemotherapy suggests differentiation as a therapeutic strategy for bladder cancer
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    Loss of key endosymbiont genes may facilitate early host control of the chromatophore in Paulinella
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    The human mitochondrial genome contains a second light strand promoter
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    Intracellular cholesterol pools regulate oncogenic signaling and epigenetic circuitries in Early T-cell Precursor Acute Lymphoblastic Leukemia
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  77. Aug 2022
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    N1-methylpseudouridine found within COVID-19 mRNA vaccines produces faithful protein products
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    Detection of m6A in single cultured cells using scDART-seq
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    The sage genome provides insight into the evolutionary dynamics of diterpene biosynthesis gene cluster in plants
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    Developmental pathways are epigenetically reprogrammed during lung cancer brain metastasis
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    TOP1 CAD-seq: A protocol to map catalytically engaged topoisomerase 1 in human cells
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    Transcription Elongation Machinery Is a Druggable Dependency and Potentiates Immunotherapy in Glioblastoma Stem Cells
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  85. Jul 2022
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    Spatiotemporal genomic analysis reveals distinct molecular features in recurrent stage I non-small cell lung cancers
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    Single B Cell Gene Co-Expression Networks Implicated in Prognosis, Proliferation, and Therapeutic Responses in Non-Small Cell Lung Cancer Bulk Tumors
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    Volatile profiles of commercial vetch prepared via different processing methods
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    A chromosome-level genome assembly and intestinal transcriptome of Trypoxylus dichotomus (Coleoptera: Scarabaeidae) to understand its lignocellulose digestion ability
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    Bacterial growth in multicellular aggregates leads to the emergence of complex life cycles
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  92. Jun 2022
  93. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Clinicopathologic Characteristics of Grade 2/3 Meningiomas: A Perspective on the Role of Next-Generation Sequencing
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  94. 52.53.155.43 52.53.155.43
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  95. www.nature.com www.nature.com
    The first long-read nuclear genome assembly of Oryza australiensis, a wild rice from northern Australia
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  96. aacrjournals.org aacrjournals.org
    Quantification of neoantigen-mediated immunoediting in cancer evolution
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  97. academic.oup.com academic.oup.com
    Genomes and demographic histories of the endangered Bretschneidera sinensis (Akaniaceae)
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  98. elifesciences.org elifesciences.org
    Dnmt3a knockout in excitatory neurons impairs postnatal synapse maturation and increases the repressive histone modification H3K27me3
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    EED is required for mouse primordial germ cell differentiation in the embryonic gonad
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    Direct epitranscriptomic regulation of mammalian translation initiation through N4-acetylcytidine
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  101. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Oct4 differentially regulates chromatin opening and enhancer transcription in pluripotent stem cells
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  102. academic.oup.com academic.oup.com
    Analysis of SARS-CoV-2 known and novel subgenomic mRNAs in cell culture, animal model, and clinical samples using LeTRS, a bioinformatic tool to identify unique sequence identifiers
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  103. May 2022
  104. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    DNA-PK promotes DNA end resection at DNA double strand breaks in G0 cells
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  105. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Leveraging Allele-Specific Expression for Therapeutic Response Gene Discovery in Glioblastoma
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  106. f1000research.com f1000research.com
    F1000Research Article: The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms.
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  107. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Mitochondrial DNA Consensus Calling and Quality Filtering for Constructing Ancient Human Mitogenomes: Comparison of Two Widely Applied Methods
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  108. www.sciencedirect.com www.sciencedirect.com
    Isolation disrupts social interactions and destabilizes brain development in bumblebees
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  109. aacrjournals.org aacrjournals.org
    Melanoma-secreted Amyloid Beta Suppresses Neuroinflammation and Promotes Brain Metastasis
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    Cytoplasmic proteotoxicity regulates HRI-dependent phosphorylation of eIF2α via the Hsp70-Bag3 module
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  111. gigabytejournal.com gigabytejournal.com
    LT1, an ONT long-read-based assembly scaffolded with Hi-C data and polished with short reads
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  112. aacrjournals.org aacrjournals.org
    A Phenogenetic Axis that Modulates Clinical Manifestation and Predicts Treatment Outcome in Primary Myeloid NeoplasmsLandscape of Myeloid Neoplasms in a Chinese Cohort
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  113. 52.53.155.43 52.53.155.43
    Lessons learned about the biology and genomics of Diaphorina citri infection with “Candidatus Liberibacter asiaticus” by integrating new and archived organ-specific transcriptome data
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  114. Apr 2022
  115. journals.physiology.org journals.physiology.org
    Whole genome sequencing identifies a deletion mutation in the unknown-functional KCNG2 from familial sick sinus syndrome
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    RPAP2 regulates a transcription initiation checkpoint by inhibiting assembly of pre-initiation complex
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    An optimized 4C-seq protocol based on cistrome and epigenome data in the mouse RAW264.7 macrophage cell line
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    HNF4A modulates glucocorticoid action in the liver
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    The genomic landscape of pediatric renal cell carcinomas
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    Growth factor independence underpins a paroxysmal, aggressive Wnt5aHigh/EphA2Low phenotype in glioblastoma stem cells, conducive to experimental combinatorial therapy
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    Elevated MACC1 Expression in Colorectal Cancer Is Driven by Chromosomal Instability and Is Associated with Molecular Subtype and Worse Patient Survival
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    A high-quality assembly reveals genomic characteristics, phylogenetic status, and causal genes for leucism plumage of Indian peafowl
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    A chromosome-level genome of the human blood fluke Schistosoma japonicum identifies the genomic basis of host-switching
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    Chromosome-level genome of the globe skimmer dragonfly (Pantala flavescens)
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  126. eje.bioscientifica.com eje.bioscientifica.com
    Prevalence and phenotypic features of diabetes due to recessive, non-syndromic WFS1 mutations
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  127. aacrjournals.org aacrjournals.org
    FREQUENCY AND GENOMIC ASPECTS OF INTRINSIC RESISTANCE TO VISMODEGIB IN LOCALLY ADVANCED BASAL CELL CARCINOMA
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  128. academic.oup.com academic.oup.com
    A high-quality assembled genome and its comparative analysis decode the adaptive molecular mechanism of the number one Chinese cotton variety CRI-12
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  129. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Presence of H3K4me3 on Paternally Expressed Genes of the Paternal Genome From Sperm to Implantation
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  130. Mar 2022
  131. elifesciences.org elifesciences.org
    Novel insights from a multiomics dissection of the Hayflick limit
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  132. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Distribution and regulatory roles of oxidized 5-methylcytosines in DNA and RNA of the basidiomycete fungi Laccaria bicolor and Coprinopsis cinerea
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  133. elifesciences.org elifesciences.org
    Confined migration promotes cancer metastasis through resistance to anoikis and increased invasiveness
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  134. aacrjournals.org aacrjournals.org
    EP300 Selectively Controls the Enhancer Landscape of MYCN-Amplified Neuroblastoma
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  135. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Nonsense-mediated RNA decay is a unique vulnerability of cancer cells harboring SF3B1 or U2AF1 mutations
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  136. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    ZFTA-RELA Dictates Oncogenic Transcriptional Programs to Drive Aggressive Supratentorial Ependymoma
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  137. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Maelstrom functions in the production of Siwi-piRISC capable of regulating transposons in Bombyx germ cells
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      DOI: 10.1016/j.isci.2022.103914

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  138. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Fully resolved assembly of Cryptosporidium parvum
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  139. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Allele-specific gene expression can underlie altered transcript abundance in zebrafish mutants
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  140. www.sciencedirect.com www.sciencedirect.com
    The new Haemaphysalis longicornis genome provides insights into its requisite biological traits
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  141. Feb 2022
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    EBF1 nuclear repositioning instructs chromatin refolding to promote therapy resistance in T leukemic cells
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    Simultaneous cellular and molecular phenotyping of embryonic mutants using single-cell regulatory trajectories
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    sciencedirect.com/science/article/pii/S1534580722000557
  144. Jan 2022
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    scDART-seq reveals distinct m6A signatures and mRNA methylation heterogeneity in single cells
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    Dynamic chromatin state profiling reveals regulatory roles of auxin and cytokinin in shoot regeneration
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    Establishment of developmental gene silencing by ordered polycomb complex recruitment in early zebrafish embryos
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      DOI: 10.7554/eLife.67738

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  148. www.sciencedirect.com www.sciencedirect.com
    Multimodal regulatory elements within a hormone-specific super enhancer control a heterogeneous transcriptional response
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    A high-quality chromosome-level genome of the endangered roughskin sculpin provides insights into its evolution and adaptation
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    Improved chromosome-level genome assembly of the Glanville fritillary butterfly (Melitaea cinxia) integrating Pacific Biosciences long reads and a high-density linkage map
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  151. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Enhancer RNA Expression in Response to Glucocorticoid Treatment in Murine Macrophages
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    Heat shock factor 1 (HSF1) cooperates with estrogen receptor α (ERα) in the regulation of estrogen action in breast cancer cells
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  153. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    MAP3K7 loss drives enhanced androgen signaling and independently confers risk of recurrence in prostate cancer with joint loss of CHD1
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      DOI: 10.1158/1541-7786.MCR-20-0913

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    ncbi.nlm.nih.gov/pmc/articles/PMC8254790/
  154. Dec 2021
  155. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Transcriptome analysis reveals the contribution of oligodendrocyte and radial glia-derived cues for maintenance of microglia identity
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      DOI: 10.1002/glia.24136

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  156. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality genome and comparison of short- versus long-read transcriptome of the palaearctic duck Aythya fuligula (tufted duck)
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  157. www.sciencedirect.com www.sciencedirect.com
    Purification of astrocyte subtype based on a double reporter mice approach for downstream transcription profiling
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      DOI: 10.1016/j.xpro.2021.101009

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    sciencedirect.com/science/article/pii/S2666166721007152
  158. www.cell.com www.cell.com
    MYC assembles and stimulates topoisomerases 1 and 2 in a “topoisome”
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    cell.com/molecular-cell/fulltext/S1097-2765(21)00996-5
  159. academic.oup.com academic.oup.com
    A high-resolution genome of an euryhaline and eurythermal rhinogoby (Rhinogobius similis Gill 1895)
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      DOI: 10.1093/g3journal/jkab395

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    academic.oup.com/g3journal/advance-article/doi/10.1093/g3journal/jkab395/6430980
  160. Nov 2021
  161. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Ploidy and recombination proficiency shape the evolutionary adaptation to constitutive DNA replication stress
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      DOI: 10.1371/journal.pgen.1009875

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    ncbi.nlm.nih.gov/pmc/articles/PMC8604288/
  162. www.nature.com www.nature.com
    CHD5 inhibits metastasis of neuroblastoma
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      DOI: 10.1038/s41388-021-02081-0

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    nature.com/articles/s41388-021-02081-0
  163. www.sciencedirect.com www.sciencedirect.com
    Topoisomerase 1 activity during mitotic transcription favors the transition from mitosis to G1
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    sciencedirect.com/science/article/pii/S1097276521009072
  164. www.sciencedirect.com www.sciencedirect.com
    Autism-related dietary preferences mediate autism-gut microbiome associations
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      DOI: 10.1016/j.cell.2021.10.015

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    sciencedirect.com/science/article/pii/S0092867421012319
  165. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Identification of a novel FUS/ETV4 fusion and comparative analysis with other Ewing sarcoma fusion proteins
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      DOI: 10.1158/1541-7786.MCR-21-0354

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    ncbi.nlm.nih.gov/pmc/articles/PMC8568690/
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    Ancient genome analyses shed light on kinship organization and mating practice of Late Neolithic society in China
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      DOI: 10.1016/j.isci.2021.103352

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    Pharmacogenomics characterization of the MDM2 inhibitor MI-773 reveals candidate tumours and predictive biomarkers
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      DOI: 10.1038/s41698-021-00235-7

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  168. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Disrupted PGR-B and ESR1 signaling underlies defective decidualization linked to severe preeclampsia
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      DOI: 10.7554/eLife.70753

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    ncbi.nlm.nih.gov/pmc/articles/PMC8553341/
  169. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Sequence features of retrotransposons allow for epigenetic variability
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      DOI: 10.7554/eLife.71104

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    Acute depletion of the ARID1A subunit of SWI/SNF complexes reveals distinct pathways for activation and repression of transcription
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      DOI: 10.1016/j.celrep.2021.109943

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    sciencedirect.com/science/article/pii/S2211124721014169
  171. Oct 2021
  172. www.sciencedirect.com www.sciencedirect.com
    A bipartite element with allele-specific functions safeguards DNA methylation imprints at the Dlk1-Dio3 locus
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      DOI: 10.1016/j.devcel.2021.10.004

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  173. bpspubs.onlinelibrary.wiley.com bpspubs.onlinelibrary.wiley.com
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      DOI: 10.1002/prp2.749

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    bpspubs.onlinelibrary.wiley.com/doi/10.1002/prp2.749
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    DREAM represses distinct targets by cooperating with different THAP domain proteins
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  175. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Targeted molecular characterization of external auditory canal squamous cell carcinomas
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      DOI: 10.1002/lio2.654

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    onlinelibrary.wiley.com/doi/10.1002/lio2.654
  176. www.sciencedirect.com www.sciencedirect.com
    Evolutionary history of the extinct Sardinian dhole
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      DOI: 10.1016/j.cub.2021.09.059

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  177. www.sciencedirect.com www.sciencedirect.com
    Transcriptional and functional divergence in lateral hypothalamic glutamate neurons projecting to the lateral habenula and ventral tegmental area
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      DOI: 10.1016/j.neuron.2021.09.020

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  178. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level genome assembly for the eastern fence lizard (Sceloporus undulatus), a reptile model for physiological and evolutionary ecology
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      DOI: 10.1093/gigascience/giab066

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    ncbi.nlm.nih.gov/pmc/articles/PMC8486681/
  179. www.sciencedirect.com www.sciencedirect.com
    PIWI-mediated control of tissue-specific transposons is essential for somatic cell differentiation
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  180. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Tiled-ClickSeq for targeted sequencing of complete coronavirus genomes with simultaneous capture of RNA recombination and minority variants
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      DOI: 10.7554/eLife.68479

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  181. Sep 2021
  182. www.sciencedirect.com www.sciencedirect.com
    SATB2 preserves colon stem cell identity and mediates ileum-colon conversion via enhancer remodeling
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      DOI: 10.1016/j.stem.2021.09.004

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  183. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Leveraging the Mendelian disorders of the epigenetic machinery to systematically map functional epigenetic variation
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      DOI: 10.7554/eLife.65884

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