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  2. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Zinc Finger RNA-Binding Protein Zn72D Regulates ADAR-Mediated RNA Editing in Neurons
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    1. scibot 20 Jul 2024
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      DOI: 10.1016/j.celrep.2020.107654

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    ncbi.nlm.nih.gov/pmc/articles/PMC7306179/
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    Netrin signaling mediates survival of dormant epithelial ovarian cancer cells
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    1. scibot 20 Jul 2024
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      DOI: 10.7554/eLife.91766

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    ncbi.nlm.nih.gov/pmc/articles/PMC11257678/
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    Cerebrospinal fluid cfDNA sequencing for classification of central nervous system glioma
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    ncbi.nlm.nih.gov/pmc/articles/PMC11247324/
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    ALDH1A3-acetaldehyde metabolism potentiates transcriptional heterogeneity in melanoma
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    sciencedirect.com/science/article/pii/S2211124724007356
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    Thermal facial image analyses reveal quantitative hallmarks of aging and metabolic diseases
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    cell.com/cell-metabolism/abstract/S1550-4131(24)00188-8
  7. Jul 2024
  8. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Gapless genome assembly and epigenetic profiles reveal gene regulation of whole-genome triplication in lettuce
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    ncbi.nlm.nih.gov/pmc/articles/PMC11238431/
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    Rapid Dynamics of Signal-Dependent Transcriptional Repression by Capicua
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    ncbi.nlm.nih.gov/pmc/articles/PMC7161736/
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    The Effect of Exposure to Neighborhood Violence on Glucocorticoid Receptor Signaling in Lung Tumors
    1
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      DOI: 10.1158/2767-9764.CRC-24-0032

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    Immunological Signatures for Early Detection of Human Head and Neck Squamous Cell Carcinoma through RNA Transcriptome Analysis of Blood Platelets
    1
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      DOI: 10.3390/cancers16132399

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    Integrated re-analysis of transcriptomic and proteomic datasets reveals potential mechanisms for Zika viral-based oncolytic therapy in neuroblastoma
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      DOI: 10.12688/f1000research.132627.3

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    ncbi.nlm.nih.gov/pmc/articles/PMC11187533/
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    Placental co-transcriptional activator Vestigial-like 1 (VGLL1) drives tumorigenesis via increasing transcription of proliferation and invasion genes
    1
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      DOI: 10.3389/fonc.2024.1403052

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    ncbi.nlm.nih.gov/pmc/articles/PMC11190739/
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    Single-Mitochondrion Sequencing Uncovers Distinct Mutational Patterns and Heteroplasmy Landscape in Mouse Astrocytes and Neurons
    1
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      DOI: 10.1101/2024.06.13.598906

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    ncbi.nlm.nih.gov/pmc/articles/PMC11195285/
  15. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Low-coverage whole genome sequencing for a highly selective cohort of severe COVID-19 patients
    1
    1. scibot 02 Jul 2024
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    The annotation of GBA1 has been concealed by its protein-coding pseudogene GBAP1
    1
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      DOI: 10.1126/sciadv.adk1296

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  17. Jun 2024
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    FEBS Press
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      DOI: 10.1002/1878-0261.13672

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    febs.onlinelibrary.wiley.com/doi/10.1002/1878-0261.13672
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    The TERT Promoter is Polycomb-Repressed in Neuroblastoma Cells with Long Telomeres
    1
    1. scibot 27 Jun 2024
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      DOI: 10.1158/2767-9764.CRC-22-0287

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  20. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genomes of Dahlia pinnata, Cosmos bipinnatus, and Bidens alba in tribe Coreopsideae provide insights into polyploid evolution and inulin biosynthesis
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    Tumour microenvironment programming by an RNA–RNA-binding protein complex creates a druggable vulnerability in IDH-wild-type glioblastoma
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      DOI: 10.1038/s41556-024-01428-5

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    ncbi.nlm.nih.gov/pmc/articles/PMC11178504/
  22. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Uncovering strain- and age-dependent innate immune responses to SARS-CoV-2 infection in air-liquid-interface cultured nasal epithelia
    1
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      DOI: 10.1016/j.isci.2024.110009

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    ncbi.nlm.nih.gov/pmc/articles/PMC11166695/
  23. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    p53 gain-of-function mutation induces metastasis via Brd4-dependent Csf-1 expression
    1
    1. scibot 13 Jun 2024
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      DOI: 10.1158/2159-8290.CD-23-0601

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    ncbi.nlm.nih.gov/pmc/articles/PMC10841313/
  24. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Mechanisms of hepatic steatosis in chickens: integrated analysis of the host genome, molecular phenomics and gut microbiome
    1
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      DOI: 10.1093/gigascience/giae023

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    Generation of two induced pluripotent stem cell lines from patients with Williams syndrome
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      DOI: 10.1016/j.scr.2024.103460

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    sciencedirect.com/science/article/pii/S1873506124001582
  26. May 2024
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    CDK7 kinase activity promotes RNA polymerase II promoter escape by facilitating initiation factor release
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    1. scibot 31 May 2024
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      DOI: 10.1016/j.molcel.2024.05.007

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    sciencedirect.com/science/article/pii/S1097276524004003
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    Heterochromatic 3D genome organization is directed by HP1a- and H3K9-dependent and independent mechanisms
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    sciencedirect.com/science/article/pii/S1097276524003952
  29. www.sciencedirect.com www.sciencedirect.com
    Reciprocal conversion between annual and polycarpic perennial flowering behavior in the Brassicaceae
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      DOI: 10.1016/j.cell.2024.04.047

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  30. 52.53.155.43 52.53.155.43
    ZNF143 is a transcriptional regulator of nuclear-encoded mitochondrial genes that acts independently of looping and CTCF
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      DOI: 10.1101/2024.03.08.583864

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    52.53.155.43/18a5f967080cacc79c7f5cca9d1b0be744600675/2024.03.08.583864v1.full-html.html
  31. 52.53.155.43 52.53.155.43
    Prenatal tuning of thalamic spontaneous activity patterns regulates somatosensory map resolution
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      DOI: 10.1101/2024.03.15.585193

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    ccr-23-2907-html.html
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    T-bet deficiency and Hic1 induction override TGF-β-dependency in the formation of CD103+ intestine-resident memory CD8+ T cells
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      DOI: 10.1016/j.celrep.2024.114258

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  34. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Pharmacologic Targeting of Histone H3K27 Acetylation/BRD4-dependent Induction of ALDH1A3 for Early-phase Drug Tolerance of Gastric Cancer
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      DOI: 10.1158/2767-9764.CRC-23-0639

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  35. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    De novo transcriptome assembly and genome annotation of the fat-tailed dunnart (Sminthopsis crassicaudata)
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    Integrative molecular and spatial analysis reveals evolutionary dynamics and tumor-immune interplay of in situ and invasive acral melanoma
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      DOI: 10.1016/j.ccell.2024.04.012

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    sciencedirect.com/science/article/pii/S1535610824001363
  37. www.biorxiv.org www.biorxiv.org
    Unraveling Genome- and Immunome-wide Genetic Diversity in Jaguars (Panthera onca): Implications for Targeted Conservation
    1
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      DOI: 10.1101/2024.05.06.592690

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  38. www.biorxiv.org www.biorxiv.org
    Single-cell multiomics reveals a gene regulatory circuit promoting leukemia cell differentiation
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    Osr2 functions as a biomechanical checkpoint to aggravate CD8+ T cell exhaustion in tumor
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      DOI: 10.1016/j.cell.2024.04.023

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    A phosphate transporter in VIPergic neurons of the suprachiasmatic nucleus gates locomotor activity during the light/dark transition in mice
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    sciencedirect.com/science/article/pii/S2211124724005485
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    Mutation of SIVA, a candidate metastasis gene identified from clonally related bilateral breast cancers, promotes breast cancer cell spread in vitro and in vivo
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      DOI: 10.1371/journal.pone.0302856

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    Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems
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  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Positive and negative feedback regulation of the TGF-β1 explains two equilibrium states in skin aging
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    The MYCN oncoprotein is an RNA-binding accessory factor of the nuclear exosome targeting complex
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    Broad Next-Generation Integrated Sequencing of Myelofibrosis Identifies Disease-Specific and Age-Related Genomic Alterations
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    Variant-to-function analysis of the childhood obesity chr12q13 locus implicates rs7132908 as a causal variant within the 3′ UTR of FAIM2
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    No evidence for ac4C within human mRNA upon data reassessment
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    Single-cell senescence identification reveals senescence heterogeneity, trajectory, and modulators
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    Reprogramming the Intrahepatic Cholangiocarcinoma Immune Microenvironment by Chemotherapy and CTLA-4 Blockade Enhances Anti–PD-1 Therapy
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    Sensitive MRD detection from lymphatic fluid after surgery in HPV-associated oropharyngeal cancer
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    STAT3 couples activated tyrosine kinase signaling to the oncogenic core transcriptional regulatory circuitry of anaplastic large cell lymphoma
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    Whole genome assembly and annotation of the King Angelfish (Holacanthus passer) gives insight into the evolution of marine fishes of the Tropical Eastern Pacific
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  59. Mar 2024
  60. www.nature.com www.nature.com
    RBBP6 maintains glioblastoma stem cells through CPSF3-dependent alternative polyadenylation
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    From degraded to deciphered: ATAC-seq’s application potential in forensic diagnosis
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    An improved chromosome-level genome assembly of perennial ryegrass (Lolium perenne L.)
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    Transcriptomic analysis using RNA sequencing and phenotypic analysis of Salmonella enterica after acid exposure for different time durations using adaptive laboratory evolution
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  64. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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    The transcription factor NF-κB orchestrates nucleosome remodeling during the primary response to Toll-like receptor 4 signaling
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  68. Feb 2024
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    cd-23-0954-html.html
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  71. aacrjournals.org aacrjournals.org
    Early Cancer Detection in Li-Fraumeni Syndrome with Cell-Free DNA
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  73. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  85. www.nature.com www.nature.com
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  127. www.sciencedirect.com www.sciencedirect.com
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    Evolutionary consequences of nascent multicellular life cycles
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    Three-dimensional genome architecture coordinates key regulators of lineage specification in mammary epithelial cells
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    Associations between AI-Assisted Tumor Amphiregulin and Epiregulin IHC and Outcomes from Anti-EGFR Therapy in the Routine Management of Metastatic Colorectal Cancer
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    Super-enhancer hijacking drives ectopic expression of hedgehog pathway ligands in meningiomas
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    Prognostic Markers of DNA Methylation and Next-Generation Sequencing in Progressive Glioblastoma from the EORTC-26101 Trial
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  134. www.nature.com www.nature.com
    TET2 lesions enhance the aggressiveness of CEBPA-mutant acute myeloid leukemia by rebalancing GATA2 expression
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  135. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Acquisition of Neural Fate by Combination of BMP Blockade and Chromatin Modification
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  136. Sep 2023
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    Variation in the CENP-A sequence association landscape across diverse inbred mouse strains
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    Single-cell multi-omics defines the cell-type-specific impact of splicing aberrations in human hematopoietic clonal outgrowths
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    Characterization of the male-specific region containing the candidate sex-determining gene in Amur catfish (Silurus asotus) using third-generation- and pool-sequencing data
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    Distinct pathways of adaptive evolution in Cryptococcus neoformans reveal a mutation in adenylyl cyclase with trade-offs for pathogenicity
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  142. Aug 2023
  143. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Haplogenome assembly reveals structural variation in Eucalyptus interspecific hybrids
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    Variant-to-function analysis of the childhood obesity chr12q13 locus implicates rs7132908 as a causal variant within the 3’ UTR of FAIM2
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    Chromosome-level genome and recombination map of the male buffalo
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    Diagnosis of childhood febrile illness using a multi-class blood RNA molecular signature
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    The SMC5/6 complex compacts and silences unintegrated HIV-1 DNA and is antagonized by Vpr
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    Loss of CtBP2 may be a mechanistic link between metabolic derangements and progressive impairment of pancreatic β cell function
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    Aberrant accumulation of Kras-dependent pervasive transcripts during tumor progression renders cancer cells dependent on PAF1 expression
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  150. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Original research: Defining the spatial distribution of extracellular adenosine revealed a myeloid-dependent immunosuppressive microenvironment in pancreatic ductal adenocarcinoma
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    Effectors Enabling Adaptation to Mitochondrial Complex I Loss in Hürthle Cell Carcinoma
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    Proteasome Inhibition Sensitizes Liposarcoma to MDM2 Inhibition with Nutlin-3 by Activating the ATF4/CHOP Stress Response Pathway
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  153. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome resequencing reveals independent domestication and breeding improvement of naked oat
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  154. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Inhibition of DNMT1 methyltransferase activity via glucose-regulated O-GlcNAcylation alters the epigenome
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      DOI: 10.7554/eLife.85595

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  155. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome-Wide SNP and Indel Discovery in Abaca (Musa textilis Née) and among Other Musa spp. for Abaca Genetic Resources Management
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  156. Jul 2023
  157. www.sciencedirect.com www.sciencedirect.com
    The stability of the myelinating oligodendrocyte transcriptome is regulated by the nuclear lamina
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    A new haplotype-resolved turkey genome to enable turkey genetics and genomics research
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  159. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A network-based approach reveals long non-coding RNAs associated with disease activity in lupus nephritis: key pathways for flare and potential biomarkers to be used as liquid biopsies
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  160. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Resolving the pathogenesis of anaplastic Wilms tumors through spatial mapping of cancer cell evolution
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    Prenatal Δ9-tetrahydrocannabinol exposure in males leads to motivational disturbances related to striatal epigenetic dysregulation
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  162. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    High-sensitivity mutation analysis of cell-free DNA for disease monitoring in endometrial cancer
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  163. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Low-level repressive histone marks fine-tune gene transcription in neural stem cells
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    Antigen presentation by clonally diverse CXCR5+ B cells to CD4 and CD8 T cells is associated with durable response to immune checkpoint inhibitors
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  165. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    An initial genomic blueprint of the healthy human oesophageal microbiome
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  166. www.sciencedirect.com www.sciencedirect.com
    CRIC-seq protocol for in situ profiling of proximal RNA-RNA contacts associated with RNA-binding proteins
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  167. 52.53.155.43 52.53.155.43
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  168. 52.53.155.43 52.53.155.43
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  169. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the hybrid grapevine Vitis ‘Chambourcin’
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  171. 52.53.155.43 52.53.155.43
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  172. www.biorxiv.org www.biorxiv.org
    Divergence of TORC1-mediated Stress Response Leads to Novel Acquired Stress Resistance in a Pathogenic Yeast
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    F1000Research Article: Integrative transcriptomic and proteomic study of Zika viral infection reveals potential mechanisms for oncolytic therapy in neuroblastoma.
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  174. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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    (R)-2-hydroxyglutarate inhibits KDM5 histone lysine demethylases to drive transformation in IDH-mutant cancers
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    Activating an Adaptive Immune Response with a Telomerase-mediated Telomere Targeting Therapeutic in Hepatocellular Carcinoma
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    Comprehensive DNA methylation analysis indicates that pancreatic intraepithelial neoplasia lesions are acinar-derived and epigenetically primed for carcinogenesis
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    Enhanced glutaminolysis drives hypoxia-induced chemoresistance in pancreatic cancer
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    5-Azacytidine- and retinoic-acid-induced reprogramming of DCCs into dormancy suppresses metastasis via restored TGF-β-SMAD4 signaling
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  182. May 2023
  183. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Evolution of Resistance to Irinotecan in Cancer Cells Involves Generation of Topoisomerase-Guided Mutations in Non-Coding Genome That Reduce the Chances of DNA Breaks
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    Transcriptional dynamics of delaminating neuroblasts in the mouse otic vesicle
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    Transition from Transient DNA Rereplication to Inherited Gene Amplification Following Prolonged Environmental Stress
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  187. www.nature.com www.nature.com
    Germline modifiers of the tumor immune microenvironment implicate drivers of cancer risk and immunotherapy response
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  188. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Mitogenome evidence shows two radiation events and dispersals of matrilineal ancestry from northern coastal China to the Americas and Japan
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  189. onlinelibrary.wiley.com onlinelibrary.wiley.com
    KMT2D Deficiency Promotes Myeloid Leukemias which Is Vulnerable to Ribosome Biogenesis Inhibition
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  190. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  191. academic.oup.com academic.oup.com
    A high-quality, long-read genome assembly of the whitelined sphinx moth (Lepidoptera: Sphingidae: Hyles lineata) shows highly conserved melanin synthesis pathway genes
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  192. www.biorxiv.org www.biorxiv.org
    L1 retrotransposons drive human neuronal transcriptome complexity and functional diversification
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    Bcl-xL is translocated to the nucleus via CtBP2 to epigenetically promote metastasis
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  194. www.sciencedirect.com www.sciencedirect.com
    Functional interplay between Mediator and RSC chromatin remodeling complex controls nucleosome-depleted region maintenance at promoters
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  195. Apr 2023
  196. www.sciencedirect.com www.sciencedirect.com
    A hyper-quiescent chromatin state formed during aging is reversed by regeneration
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    Maternal and food microbial sources shape the infant microbiome of a rural Ethiopian population
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    Comprehensive epigenomic profiling reveals the extent of disease-specific chromatin states and informs target discovery in ankylosing spondylitis
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    Novel enhancers conferring compensatory transcriptional regulation of Nkx2-5 in heart development
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  200. www.biorxiv.org www.biorxiv.org
    Splicing accuracy varies across human introns, tissues and age
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    INTAC endonuclease and phosphatase modules differentially regulate transcription by RNA polymerase II
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    Elevated enhancer-oncogene contacts and higher oncogene expression levels by recurrent CTCF inactivating mutations in acute T cell leukemia
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    Complementary gene regulation by NRF1 and NRF2 protects against hepatic cholesterol overload
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