284 Matching Annotations
  1. Sep 2020
  2. elifesciences.org elifesciences.org
    The histone modification reader ZCWPW1 links histone methylation to PRDM9-induced double-strand break repair
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    1. scibot 16 Sep 2020
      RRID:SCR_011793

      DOI: 10.7554/eLife.53459

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    elifesciences.org/articles/53459
  3. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Building the vertebrate codex using the gene breaking protein trap library
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    1. scibot 16 Sep 2020
      RRID:SCR_011793

      DOI: 10.7554/eLife.54572

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    ncbi.nlm.nih.gov/pmc/articles/PMC7486118/
  4. elifesciences.org elifesciences.org
    Deletion of Stk11 and Fos in mouse BLA projection neurons alters intrinsic excitability and impairs formation of long-term aversive memory
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    1. scibot 14 Sep 2020
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      DOI: 10.7554/eLife.61036

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    elifesciences.org/articles/61036
  5. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The testis protein ZNF165 is a SMAD3 cofactor that coordinates oncogenic TGFβ signaling in triple-negative breast cancer
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    1. scibot 11 Sep 2020
      RRID:SCR_011793

      DOI: 10.7554/eLife.57679

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    ncbi.nlm.nih.gov/pmc/articles/PMC7302877/
  6. www.sciencedirect.com www.sciencedirect.com
    LINE-1 specific nuclear organization in mice olfactory sensory neurons
    1
    1. scibot 11 Sep 2020
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      DOI: 10.1016/j.mcn.2020.103494

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    sciencedirect.com/science/article/pii/S104474312030004X
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    Genome-Scale CRISPR Screening in Human Intestinal Organoids Identifies Drivers of TGF-β Resistance
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    1. scibot 10 Sep 2020
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      DOI: 10.1016/j.stem.2020.02.007

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    sciencedirect.com/science/article/pii/S1934590920300606
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    Resolving the 3D Landscape of Transcription-Linked Mammalian Chromatin Folding
    1
    1. scibot 09 Sep 2020
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      DOI: 10.1016/j.molcel.2020.03.002

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    sciencedirect.com/science/article/pii/S1097276520301507
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    Nascent Transcript Folding Plays a Major Role in Determining RNA Polymerase Elongation Rates
    1
    1. scibot 09 Sep 2020
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      DOI: 10.1016/j.molcel.2020.06.002

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    sciencedirect.com/science/article/pii/S1097276520303877
  10. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Expandable and reversible copy number amplification drives rapid adaptation to antifungal drugs
    1
    1. scibot 08 Sep 2020
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      DOI: 10.7554/eLife.58349

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    ncbi.nlm.nih.gov/pmc/articles/PMC7371428/
  11. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Sphingosine 1-phosphate-regulated transcriptomes in heterogenous arterial and lymphatic endothelium of the aorta
    1
    1. scibot 06 Sep 2020
      RRID:SCR_011793

      DOI: 10.7554/eLife.52690

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    ncbi.nlm.nih.gov/pmc/articles/PMC7054001/
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    Regulatory Dynamics of Tet1 and Oct4 Resolve Stages of Global DNA Demethylation and Transcriptomic Changes in Reprogramming
    1
    1. scibot 03 Sep 2020
      RRID:SCR_011793

      DOI: 10.1016/j.celrep.2020.01.065

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    sciencedirect.com/science/article/pii/S2211124720300905
  13. Jan 2020
  14. elifesciences.org elifesciences.org
    Evolution of Yin and Yang isoforms of a chromatin remodeling subunit precedes the creation of two genes
    1
    1. scibot 13 Jan 2020
      RRID:SCR_011793

      DOI: 10.7554/eLife.48119

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    elifesciences.org/articles/48119
  15. elifesciences.org elifesciences.org
    Large, three-generation human families reveal post-zygotic mosaicism and variability in germline mutation accumulation
    1
    1. scibot 13 Jan 2020
      RRID:SCR_011793

      DOI: 10.7554/eLife.46922

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    elifesciences.org/articles/46922
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    RNA Interactions Are Essential for CTCF-Mediated Genome Organization
    1
    1. scibot 13 Jan 2020
      RRID:SCR_011793

      DOI: 10.1016/j.molcel.2019.08.015

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    sciencedirect.com/science/article/pii/S1097276519306549
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    GCNA Interacts with Spartan and Topoisomerase II to Regulate Genome Stability
    1
    1. scibot 13 Jan 2020
      RRID:SCR_011793

      DOI: 10.1016/j.devcel.2019.11.006

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    sciencedirect.com/science/article/pii/S1534580719309372
  18. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome plasticity in Candida albicans is driven by long repeat sequences
    1
    1. scibot 13 Jan 2020
      RRID:SCR_011793

      DOI: 10.7554/eLife.45954

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    ncbi.nlm.nih.gov/pmc/articles/PMC6591007/
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    P Granules Protect RNA Interference Genes from Silencing by piRNAs
    1
    1. scibot 13 Jan 2020
      RRID:SCR_011793

      DOI: 10.1016/j.devcel.2019.07.026

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    sciencedirect.com/science/article/pii/S153458071930632X
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    Recurrent SMARCB1 Mutations Reveal a Nucleosome Acidic Patch Interaction Site That Potentiates mSWI/SNF Complex Chromatin Remodeling
    1
    1. scibot 13 Jan 2020
      RRID:SCR_011793

      DOI: 10.1016/j.cell.2019.10.044

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    sciencedirect.com/science/article/pii/S0092867419312218
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    A Patient-Derived Glioblastoma Organoid Model and Biobank Recapitulates Inter- and Intra-tumoral Heterogeneity
    1
    1. scibot 13 Jan 2020
      RRID:SCR_011793

      DOI: 10.1016/j.cell.2019.11.036

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    sciencedirect.com/science/article/pii/S0092867419313212
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    Genome-wide Analyses of Chromatin State in Human Mast Cells Reveal Molecular Drivers and Mediators of Allergic and Inflammatory Diseases
    1
    1. scibot 13 Jan 2020
      RRID:SCR_011793

      DOI: 10.1016/j.immuni.2019.09.021

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    sciencedirect.com/science/article/pii/S1074761319304170
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    ERG Controls B Cell Development by Promoting Igh V-to-DJ Recombination
    1
    1. scibot 13 Jan 2020
      RRID:SCR_011793

      DOI: 10.1016/j.celrep.2019.10.098

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    sciencedirect.com/science/article/pii/S2211124719314317
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    Endodermal Maternal Transcription Factors Establish Super-Enhancers during Zygotic Genome Activation
    1
    1. scibot 13 Jan 2020
      RRID:SCR_011793

      DOI: 10.1016/j.celrep.2019.05.013

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    sciencedirect.com/science/article/pii/S2211124719306242
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    Meta-analysis of Chromatin Programming by Steroid Receptors
    1
    1. scibot 13 Jan 2020
      RRID:SCR_011793

      DOI: 10.1016/j.celrep.2019.08.039

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    sciencedirect.com/science/article/pii/S2211124719310794
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    DUX4 Suppresses MHC Class I to Promote Cancer Immune Evasion and Resistance to Checkpoint Blockade
    1
    1. scibot 13 Jan 2020
      RRID:SCR_011793

      DOI: 10.1016/j.devcel.2019.06.011

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    sciencedirect.com/science/article/pii/S1534580719305295
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    Continuous and Discrete Neuron Types of the Adult Murine Striatum
    1
    1. scibot 13 Jan 2020
      RRID:SCR_011793

      DOI: 10.1016/j.neuron.2019.11.004

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    sciencedirect.com/science/article/pii/S0896627319309675
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    Distinct Classes of Chromatin Loops Revealed by Deletion of an RNA-Binding Region in CTCF
    1
    1. scibot 13 Jan 2020
      RRID:SCR_011793

      DOI: 10.1016/j.molcel.2019.07.039

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    sciencedirect.com/science/article/pii/S1097276519305945
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    Maternal Ribosomes Are Sufficient for Tissue Diversification during Embryonic Development in C. elegans
    1
    1. scibot 13 Jan 2020
      RRID:SCR_011793

      DOI: 10.1016/j.devcel.2019.01.019

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    sciencedirect.com/science/article/pii/S1534580719300474
  30. academic.oup.com academic.oup.com
    Dynamic transcriptome profiling dataset of vaccinia virus obtained from long-read sequencing techniques
    1
    1. scibot 13 Jan 2020
      RRID:SCR_011793

      DOI: 10.1093/gigascience/giy139

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    academic.oup.com/gigascience/article/7/12/giy139/5202462
  31. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
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    1. scibot 13 Jan 2020
      RRID:SCR_011793

      DOI: 10.1186/s13072-019-0254-0

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    ncbi.nlm.nih.gov/pmc/articles/PMC6341619/
  32. europepmc.org europepmc.org
    Untitled document
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    1. scibot 13 Jan 2020
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      DOI: 10.1186/s13072-019-0254-0

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    Molecular Classification and Comparative Taxonomics of Foveal and Peripheral Cells in Primate Retina
    1
    1. scibot 13 Jan 2020
      RRID:SCR_011793

      DOI: 10.1016/j.cell.2019.01.004

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    sciencedirect.com/science/article/pii/S0092867419300376
  34. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
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    1. scibot 13 Jan 2020
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      DOI: 10.7554/eLife.39633

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    ncbi.nlm.nih.gov/pmc/articles/PMC6322861/
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    Impaired LXRα Phosphorylation Attenuates Progression of Fatty Liver Disease
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      RRID:SCR_011793

      DOI: 10.1016/j.celrep.2018.12.094

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    sciencedirect.com/science/article/pii/S2211124718320540
  36. www.sciencedirect.com www.sciencedirect.com
    Untitled document
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      DOI: 10.1016/j.cell.2019.01.040

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    sciencedirect.com/science/article/pii/S0092867419301035
  37. academic.oup.com academic.oup.com
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    1. scibot 13 Jan 2020
      RRID:SCR_011793

      DOI: 10.1093/gigascience/giz051

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    academic.oup.com/gigascience/article/8/5/giz051/5488103
  38. Nov 2018
  39. www.sciencedirect.com www.sciencedirect.com
    Histone Deacetylases 1 and 2 Regulate Microglia Function during Development, Homeostasis, and Neurodegeneration in a Context-Dependent Manner
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      IGV

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    sciencedirect.com/science/article/pii/S107476131830075X
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    IRF8 Regulates Transcription of Naips for NLRC4 Inflammasome Activation
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    1. scibot 05 Nov 2018
      Integrative Genomics Viewer

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    sciencedirect.com/science/article/pii/S0092867418302320
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    Mutational Landscape of Secondary Glioblastoma Guides MET-Targeted Trial in Brain Tumor
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    1. scibot 05 Nov 2018
      IGV

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    sciencedirect.com/science/article/pii/S0092867418312509
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    The Nuclear Receptor PPARγ Controls Progressive Macrophage Polarization as a Ligand-Insensitive Epigenomic Ratchet of Transcriptional Memory
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    1. scibot 05 Nov 2018
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    sciencedirect.com/science/article/pii/S1074761318303960
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    The Lineage-Defining Transcription Factors SOX2 and NKX2-1 Determine Lung Cancer Cell Fate and Shape the Tumor Immune Microenvironment
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      Integrative Genomics Viewer

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    ZFX Mediates Non-canonical Oncogenic Functions of the Androgen Receptor Splice Variant 7 in Castrate-Resistant Prostate Cancer
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    Combinatorial CRISPR/Cas9 Approach to Elucidate a Far-Upstream Enhancer Complex for Tissue-Specific Sox9 Expression
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    Identification of Therapeutic Targets in Rhabdomyosarcoma through Integrated Genomic, Epigenomic, and Proteomic Analyses
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    Neutralizing Gatad2a-Chd4-Mbd3/NuRD Complex Facilitates Deterministic Induction of Naive Pluripotency
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    Integrated Genomic Analysis of Hürthle Cell Cancer Reveals Oncogenic Drivers, Recurrent Mitochondrial Mutations, and Unique Chromosomal Landscapes
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    Influenza Virus Mounts a Two-Pronged Attack on Host RNA Polymerase II Transcription
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    The Fusarium graminearum Histone Acetyltransferases Are Important for Morphogenesis, DON Biosynthesis, and Pathogenicity
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    Spliceosome Profiling Visualizes Operations of a Dynamic RNP at Nucleotide Resolution
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    Insm1 Induces Neural Progenitor Delamination in Developing Neocortex via Downregulation of the Adherens Junction Belt-Specific Protein Plekha7
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    Dynamic Reorganization of Chromatin Accessibility Signatures during Dedifferentiation of Secretory Precursors into Lgr5+ Intestinal Stem Cells
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    The Transcription Factor T-bet Limits Amplification of Type I IFN Transcriptome and Circuitry in T Helper 1 Cells
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    Ciliary transcription factors and miRNAs precisely regulate Cp110 levels required for ciliary adhesions and ciliogenesis
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  84. www.sciencedirect.com www.sciencedirect.com
    Foxh1 Occupies cis-Regulatory Modules Prior to Dynamic Transcription Factor Interactions Controlling the Mesendoderm Gene Program
    1
    1. scibot 08 Nov 2017
      SCR_011793

      Curator: @kaitlinsung

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      (Integrative Genomics Viewer, RRID:SCR_011793)

      SciCrunch record: RRID:SCR_011793

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      RRID:SCR_011793 RRIDCUR:Validated
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    sciencedirect.com/science/article/pii/S1534580717300862
  85. www.sciencedirect.com www.sciencedirect.com
    Metazoan Nuclear Pores Provide a Scaffold for Poised Genes and Mediate Induced Enhancer-Promoter Contacts
    1
    1. scibot 08 Nov 2017
      IGV

      Curator: @Zeljana_Babic

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      (Integrative Genomics Viewer, RRID:SCR_011793)

      SciCrunch record: RRID:SCR_011793

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      RRID:SCR_011793 RRIDCUR:Missing
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    sciencedirect.com/science/article/pii/S1097276517301351
  86. www.sciencedirect.com www.sciencedirect.com
    A Viral Immunoevasin Controls Innate Immunity by Targeting the Prototypical Natural Killer Cell Receptor Family
    1
    1. scibot 08 Nov 2017
      SCR_011793

      Curator: @kaitlinsung

      Resource used:

      (Integrative Genomics Viewer, RRID:SCR_011793)

      SciCrunch record: RRID:SCR_011793

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      RRID:SCR_011793 RRIDCUR:Validated
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    sciencedirect.com/science/article/pii/S0092867417302507
  87. www.sciencedirect.com www.sciencedirect.com
    Nuclear RNA Decay Pathways Aid Rapid Remodeling of Gene Expression in Yeast
    1
    1. scibot 08 Nov 2017
      Integrative Genomics Viewer

      Curator: @kaitlinsung

      Resource used:

      (Integrative Genomics Viewer, RRID:SCR_011793)

      SciCrunch record: RRID:SCR_011793

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      RRID:SCR_011793 RRIDCUR:Missing
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    sciencedirect.com/science/article/pii/S1097276517300059
  88. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    An alternative splicing program promotes adipose tissue thermogenesis
    1
    1. scibot 08 Nov 2017
      IGV

      Curator: @gabimpine

      Resource used:

      (Integrative Genomics Viewer, RRID:SCR_011793)

      SciCrunch record: RRID:SCR_011793

      Alternate resolvers: SciCrunch xml N2T identifiers.org

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      RRID:SCR_011793 RRIDCUR:Missing
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    ncbi.nlm.nih.gov/pmc/articles/PMC5026472/