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Jun 2023
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WeiTsing, a pericycle-expressed ion channel, safeguards the stele to confer clubroot resistance

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Structures of sperm flagellar doublet microtubules expand the genetic spectrum of male infertility

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The lipid flippase ATP10B enables cellular lipid uptake under stress conditions

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Activity-dependent local protection and lateral inhibition control synaptic competition in developing mitral cells in mice

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APOE expression and secretion are modulated by mitochondrial dysfunction

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Host genetics highlights IFN-γ-dependent Toxoplasma genes encoding secreted and non-secreted virulence factors in in vivo CRISPR screens

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Secreted ORF8 induces monocytic pro-inflammatory cytokines through NLRP3 pathways in severe patients with COVID-19

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The E3 ubiquitin ligase FBXL6 controls the quality of newly synthesized mitochondrial ribosomal proteins

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The Rab5 effector FERRY links early endosomes with mRNA localization

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Coupling between GPR143 and dopamine D2 receptor is required for selective potentiation of dopamine D2 receptor function by L-3,4-dihydroxyphenylalanine in the dorsal striatum

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PKCδ regulates chromatin remodeling and DNA repair through SIRT6

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LEAFY homeostasis is regulated via ubiquitin-dependent degradation and sequestration in cytoplasmic condensates

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EWSR1 maintains centromere identity

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“Disruption of Golgi markers by two RILP-directed shRNAs in neurons: a new role for RILP or a neuron-specific off-target phenotype?”

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Antagonistic interactions among structured domains in the multivalent Bicc1-ANKS3-ANKS6 protein network govern phase transitioning of target mRNAs

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Allnighter pseudokinase-mediated feedback links proteostasis and sleep in Drosophila

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  DOI: 10.1038/s41467-023-38485-7
  
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Human DUX4 and mouse Dux interact with STAT1 and broadly inhibit interferon-stimulated gene induction

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  DOI: 10.7554/eLife.82057
  
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ERK and USP5 govern PD-1 homeostasis via deubiquitination to modulate tumor immunotherapy

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Functional coordination between transcription factor clustering and gene activity

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MYO10 regulates genome stability and cancer inflammation through mediating mitosis

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Architecture of androgen receptor pathways amplifying glucagon-like peptide-1 insulinotropic action in male pancreatic β cells

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A phospho-switch constrains BTL2-mediated phytocytokine signaling in plant immunity

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LAPTM4B-YAP loop feedback amplification enhances the stemness of hepatocellular carcinoma

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Human papillomavirus E5 suppresses immunity via inhibition of the immunoproteasome and STING pathway

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Neurobeachin controls the asymmetric subcellular distribution of electrical synapse proteins

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HAPSTR1 localizes HUWE1 to the nucleus to limit stress signaling pathways

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AdipoR2 recruits protein interactors to promote fatty acid elongation and membrane fluidity

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PASK links cellular energy metabolism with a mitotic self-renewal network to establish differentiation competence

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A ubiquitin fusion reporter to monitor muscle proteostasis in C. elegans

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Fluid shear stress generates a unique signaling response by activating multiple TGFβ family type I receptors in osteocytes

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Viral E protein neutralizes BET protein-mediated post-entry antagonism of SARS-CoV-2

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Structural and functional basis of the universal transcription factor NusG pro-pausing activity in Mycobacterium tuberculosis

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DNA-initiated epigenetic cascades driven by C9orf72 hexanucleotide repeat

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Fructose-1,6-bisphosphatase is a nonenzymatic safety valve that curtails AKT activation to prevent insulin hyperresponsiveness

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A dual, catalytic role for the fission yeast Ccr4-Not complex in gene silencing and heterochromatin spreading

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  DOI: 10.1101/2023.03.27.534317
  
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Fluorescence-resonance-energy-transfer-based assay to estimate modulation of TDP1 activity through arginine methylation

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DTX3L E3 ligase targets p53 for degradation at poly ADP-ribose polymerase-associated DNA damage sites

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Stem cell competition driven by the Axin2-p53 axis controls brain size during murine development

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MeCP2 Represses the Activity of Topoisomerase IIβ in Long Neuronal Genes

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Conformational changes in the negative arm of the circadian clock correlate with dynamic interactomes involved in post-transcriptional regulation

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Targeting USP2 regulation of VPRBP-mediated degradation of p53 and PD-L1 for cancer therapy

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PPDPF suppresses the development of hepatocellular carcinoma through TRIM21-mediated ubiquitination of RIPK1

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CDK5-PRMT1-WDR24 signaling cascade promotes mTORC1 signaling and tumor growth

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Protocol to purify the histone deacetylase SIRT6 and assess its activity in vitro

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The orphan receptor Nur77 binds cytoplasmic LPS to activate the non-canonical NLRP3 inflammasome

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SENP3 and USP7 regulate Polycomb-rixosome interactions and silencing functions

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Sodium ion influx regulates liquidity of biomolecular condensates in hyperosmotic stress response

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Histone H3 phospho-regulation by KimH3 in both interphase and mitosis

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The length of FOXE1 polyalanine tract in congenital hypothyroidism: Evidence for a pathogenic role from familial, molecular and cohort studies

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FSBP suppresses tumor cell migration by inhibiting the JNK pathway

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Altered striatal actin dynamics drives behavioral inflexibility in a mouse model of fragile X syndrome

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The RNA binding protein RALY suppresses p53 activity and promotes lung tumorigenesis

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Epithelial cells activate fibroblasts to promote esophageal cancer development

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NLRC5 affects diet-induced adiposity in female mice and co-regulates peroxisome proliferator-activated receptor PPARγ target genes

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Structural basis for the Rad6 activation by the Bre1 N-terminal domain

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UBL7 enhances antiviral innate immunity by promoting Lys27-linked polyubiquitination of MAVS

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Pharmacological boosting of cGAS activation sensitizes chemotherapy by enhancing antitumor immunity

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HNRNPU facilitates antibody class-switch recombination through C-NHEJ promotion and R-loop suppression

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ZYG11B potentiates the antiviral innate immune response by enhancing cGAS-DNA binding and condensation

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The Ubiquitin-specific Protease USP36 Associates with the Microprocessor Complex and Regulates miRNA Biogenesis by SUMOylating DGCR8

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Mutating novel interaction sites in NRP1 reduces SARS-CoV-2 spike protein internalization

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MFN1 augmentation prevents retinal degeneration in a Charcot-Marie-Tooth type 2A mouse model

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The conserved histone chaperone Spt6 is strongly required for DNA replication and genome stability

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Remodeling of the Ribosomal Quality Control and Protein Translation by a Viral Ubiquitin Deconjugase

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NanoB2 to monitor interactions of ligands with membrane proteins by combining nanobodies and NanoBRET

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ARMH3-mediated recruitment of PI4KB directs Golgi-to-endosome trafficking and activation of the antiviral effector STING

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Targeting androgen receptor and the variants by an orally bioavailable Proteolysis Targeting Chimeras compound in castration resistant prostate cancer

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Scorpionfish BPI is highly active against multiple drug-resistant Pseudomonas aeruginosa isolates from cystic fibrosis patients

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DDX47, MeCP2, and other functionally heterogeneous factors protect cells from harmful R loops

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E3 ligase autoinhibition by C-degron mimicry maintains C-degron substrate fidelity

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Illuminating cellular and extracellular vesicle-mediated communication via a split-Nanoluc reporter in vitro and in vivo

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Reversal of malignant ADAR1 splice isoform switching with Rebecsinib

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Plasmodium sporozoites require the protein B9 to invade hepatocytes

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The clathrin adaptor complex-1 and Rab12 regulate post-Golgi trafficking of wild-type epidermal growth factor receptor (EGFR)

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Photoperiod controls plant seed size in a CONSTANS-dependent manner

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Decorating chromatin for enhanced genome editing using CRISPR-Cas9

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Dephosphorylation of the pre-initiation complex is critical for origin firing

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hCINAP regulates the differentiation of embryonic stem cells by regulating NEDD4 liquid-liquid phase-separation-mediated YAP1 activation

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Seasonal cues act through the circadian clock and pigment-dispersing factor to control EYES ABSENT and downstream physiological changes

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N-glycosylated intestinal protein BCF-1 shapes microbial colonization by binding bacteria via its fimbrial protein

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The selective autophagy adaptor p62/SQSTM1 forms phase condensates regulated by HSP27 that facilitate the clearance of damaged lysosomes via lysophagy

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Single-cell profiling of lncRNAs in human germ cells and molecular analysis reveals transcriptional regulation of LNC1845 on LHX8

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Identification of key microRNAs regulating ELOVL6 and glioblastoma tumorigenesis

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An E3 ligase network engages GCN1 to promote the degradation of translation factors on stalled ribosomes

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Targeting KRAS-mutant stomach/colorectal tumors by disrupting the ERK2-p53 complex

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The interferon stimulated gene-encoded protein HELZ2 inhibits human LINE-1 retrotransposition and LINE-1 RNA-mediated type I interferon induction

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An ERAD-independent role for rhomboid pseudoprotease Dfm1 in mediating sphingolipid homeostasis

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Global cancer statistics, 2012

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Loss of RREB1 in pancreatic beta cells reduces cellular insulin content and affects endocrine cell gene expression

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Zinc-finger protein Zpr1 is a bespoke chaperone essential for eEF1A biogenesis

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Targeting BCAT1 combined with α-ketoglutarate triggers metabolic synthetic lethality in glioblastoma

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The FANCJ helicase unfolds DNA-protein crosslinks to promote their repair

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METTL16 drives leukemogenesis and leukemia stem cell self-renewal by reprogramming BCAA metabolism

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SSRN-id4189094-html.html

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The Scaffolding Function of LSD1/KDM1A Reinforces a Negative Feedback Loop to Repress Stem Cell Gene Expression during Primitive Hematopoiesis

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Stimulation of interferon-β responses by aberrant SARS-CoV-2 small viral RNAs acting as retinoic acid-inducible gene-I agonists

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Recruitment of TRIM33 to cell-context specific PML nuclear bodies regulates nodal signaling in mESCs

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The Golgi-resident protein ACBD3 concentrates STING at ER-Golgi contact sites to drive export from the ER

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Dephosphorylation of the pre-initiation complex is critical for origin firing

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GRAMD1/ASTER-mediated cholesterol transport promotes Smoothened cholesterylation at the endoplasmic reticulum

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EGFR-phosphorylated GDH1 harmonizes with RSK2 to drive CREB activation and tumor metastasis in EGFR-activated lung cancer

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Z-REX uncovers a bifurcation in function of Keap1 paralogs

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EstG is a novel esterase required for cell envelope integrity in Caulobacter

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A minimal construct of nuclear-import receptor Karyopherin-β2 defines the regions critical for chaperone and disaggregation activity

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Branchpoint translocation by fork remodelers as a general mechanism of R-loop removal

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The insulin and IGF signaling pathway sustains breast cancer stem cells by IRS2/PI3K-mediated regulation of MYC

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Hippo-released WWC1 facilitates AMPA receptor regulatory complexes for hippocampal learning

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SRSF6 balances mitochondrial-driven innate immune outcomes through alternative splicing of BAX

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LPA maintains innate antiviral immunity in a pro-active state via STK38L-mediated IRF3 Ser303 phosphorylation

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Dynamic quality control machinery that operates across compartmental borders mediates the degradation of mammalian nuclear membrane proteins

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Neuron-specific protein network mapping of autism risk genes identifies shared biological mechanisms and disease-relevant pathologies

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A DARPin-based molecular toolset to probe gephyrin and inhibitory synapse biology

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A novel function for the sperm adhesion protein IZUMO1 in cell–cell fusion

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HBO1 catalyzes lysine benzoylation in mammalian cells

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AMPK directly phosphorylates TBK1 to integrate glucose sensing into innate immunity

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Regulation of mitophagy by the NSL complex underlies genetic risk for Parkinson’s disease at 16q11.2 and MAPT H1 loci

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Epigenetic silencing by the SMC5/6 complex mediates HIV-1 latency

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ATG9A and ATG2A form a heteromeric complex essential for autophagosome formation

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Structural and functional basis of mammalian microRNA biogenesis by Dicer

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Elements of the ERAD ubiquitin ligase Doa10 regulating sequential poly-ubiquitylation of its targets

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Nuclear stabilization of p53 requires a functional nucleolar surveillance pathway

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Ferroptosis heterogeneity in triple-negative breast cancer reveals an innovative immunotherapy combination strategy

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A surface-receptor-coupled G protein regulates plant immunity through nuclear protein kinases

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Estrogen receptor β activation inhibits colitis by promoting NLRP6-mediated autophagy

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Cytoplasmic SIRT6-mediated ACSL5 deacetylation impedes nonalcoholic fatty liver disease by facilitating hepatic fatty acid oxidation

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Yeast Mediator facilitates transcription initiation at most promoters via a Tail-independent mechanism

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Molecular mechanism of RIPK1 and caspase-8 in homeostatic type I interferon production and regulation

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Regulation of KDM5C stability and enhancer reprogramming in breast cancer

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Evolutionary analyses reveal immune cell receptor GPR84 as a conserved receptor for bacteria-derived molecules

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Meteorin links the bone marrow hypoxic state to hematopoietic stem/progenitor cell mobilization

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Heterologous reporter expression in the planarian Schmidtea mediterranea through somatic mRNA transfection

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Developmental and housekeeping transcriptional programs in Drosophila require distinct chromatin remodelers

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Hedgehog signaling activates a mammalian heterochronic gene regulatory network controlling differentiation timing across lineages

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Scalable CRISPR-Cas9 chemical genetic screens in non-transformed human cells

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Identification of CUL4A-DDB1-WDFY1 as an E3 ubiquitin ligase complex involved in initiation of lysophagy

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CHAMP1 binds to REV7/FANCV and promotes homologous recombination repair

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Wnt5a–Vangl1/2 signaling regulates the position and direction of lung branching through the cytoskeleton and focal adhesions

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Tumor targeted 4-1BB agonist antibody-albumin fusions with high-affinity to FcRn induce anti-tumor immunity without toxicity

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A dimer-monomer switch controls CHIP-dependent substrate ubiquitylation and processing

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Antibody escape and cryptic cross-domain stabilization in the SARS-CoV-2 Omicron spike protein

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The redox cycling of STAT2 maintains innate immune homeostasis

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STK25 inhibits PKA signaling by phosphorylating PRKAR1A

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BCL10 mutations define distinct dependencies guiding precision therapy for DLBCL

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Klebsiella pneumoniae hijacks the Toll-IL-1R protein SARM1 in a type I IFN-dependent manner to antagonize host immunity

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Carnitine palmitoyltransferase 1C negatively regulates the endocannabinoid hydrolase ABHD6 in mice, depending on nutritional status

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A neural progenitor mitotic wave is required for asynchronous axon outgrowth and morphology

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Mapping subcellular localizations of unannotated microproteins and alternative proteins with MicroID

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Mycobacterium abscessus HelR interacts with RNA polymerase to confer intrinsic rifamycin resistance

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AKT1 mediates multiple phosphorylation events that functionally promote HSF1 activation

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NFIA determines the cis-effect of genetic variation on Ucp1 expression in murine thermogenic adipocytes

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FAM69C, a kinase critical for synaptic function and memory, is defective in neurodegenerative dementia

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Calcium sparks enhance the tissue fluidity within epithelial layers and promote apical extrusion of transformed cells

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RPA1 controls chromatin architecture and maintains lipid metabolic homeostasis

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Local synthesis of the phosphatidylinositol-3,4-bisphosphate lipid drives focal adhesion turnover

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Molecular mechanism of S-adenosylmethionine sensing by SAMTOR in mTORC1 signaling

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SLC46A3 is a lysosomal proton-coupled steroid conjugate and bile acid transporter involved in transport of active catabolites of T-DM1

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Inter-subunit crosstalk via PDZ synergistically governs allosteric activation of proapoptotic HtrA2

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Dynein is required for Rab7-dependent endosome maturation, retrograde dendritic transport, and degradation

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Identifying enhancers of innate immune signaling as broad-spectrum antivirals active against emerging viruses

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Evidence that HDAC7 acts as an epigenetic “reader” of AR acetylation through NCoR-HDAC3 dissociation

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Riboregulation of Enolase 1 activity controls glycolysis and embryonic stem cell differentiation

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Analysis of estrogen-regulated enhancer RNAs identifies a functional motif required for enhancer assembly and gene expression

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A rice protein modulates endoplasmic reticulum homeostasis and coordinates with a transcription factor to initiate blast disease resistance

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Interplay between symmetric arginine dimethylation and ubiquitylation regulates TDP1 proteostasis for the repair of topoisomerase I-DNA adducts

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Assembly checkpoint of the proteasome regulatory particle is activated by coordinated actions of proteasomal ATPase chaperones

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Deubiquitinase OTUD3 regulates metabolism homeostasis in response to nutritional stresses

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Itaconate is a lysosomal inducer that promotes antibacterial innate immunity

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JAZF1-SUZ12 dysregulates PRC2 function and gene expression during cell differentiation

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A TRIM66/DAX1/Dux axis suppresses the totipotent 2-cell-like state in murine embryonic stem cells

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Fatty acid oxidation protects cancer cells from apoptosis by increasing mitochondrial membrane lipids

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Mediator recruits the cohesin loader Scc2 to RNA Pol II-transcribed genes and promotes sister chromatid cohesion

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Neuronal NLRP3 is a parkin substrate that drives neurodegeneration in Parkinson’s disease

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HIV-1 exploits the Fanconi anemia pathway for viral DNA integration

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Redox-sensitive E2 Rad6 controls cellular response to oxidative stress via K63-linked ubiquitination of ribosomes

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Transcription factor Acj6 controls dendrite targeting via a combinatorial cell-surface code

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A PARylation-phosphorylation cascade promotes TOPBP1 loading and RPA-RAD51 exchange in homologous recombination

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Selective inhibition reveals the regulatory function of DYRK2 in protein synthesis and calcium entry

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Sexually dimorphic RNA helicases DDX3X and DDX3Y differentially regulate RNA metabolism through phase separation

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Septin 9 and phosphoinositides regulate lysosome localization and their association with lipid droplets

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Functional Interaction Between the Oncogenic Kinase NEK2 and Sam68 Promotes a Splicing Program Involved in Migration and Invasion in Triple-Negative Breast Cancer

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Selective requirement of MYB for oncogenic hyperactivation of a translocated enhancer in leukemia

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circMbl functions in cis and in trans to regulate gene expression and physiology in a tissue-specific fashion

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Disrupting the HDAC6-ubiquitin interaction impairs infection by influenza and Zika virus and cellular stress pathways

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Cytoplasmic PARP1 links the genome instability to the inhibition of antiviral immunity through PARylating cGAS

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Cellular signals converge at the NOX2-SHP-2 axis to induce reductive carboxylation in cancer cells

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Stem cell factor SOX2 confers ferroptosis resistance in lung cancer via upregulation of SLC7A11

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Reciprocal regulation of phosphatidylcholine synthesis and H3K36 methylation programs metabolic adaptation

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The CDC48 complex mediates ubiquitin-dependent degradation of intra-chloroplast proteins in plants

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Yeast cell death pathway requiring AP-3 vesicle trafficking leads to vacuole/lysosome membrane permeabilization

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Functional coupling of TRPM2 and extrasynaptic NMDARs exacerbates excitotoxicity in ischemic brain injury

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Epithelial STAT6 O-GlcNAcylation drives a concerted anti-helminth alarmin response dependent on tuft cell hyperplasia and Gasdermin C

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MIRO2 regulates prostate cancer cell growth via GCN1-dependent stress signaling

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Recognition of discrete export signals in early flagellar subunits during bacterial type III secretion

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Subversion of serotonin-receptor signaling in osteoblasts by kynurenine drives Acute Myeloid Leukemia

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BPS Publications

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Recycling of autophagosomal components from autolysosomes by the recycler complex

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