On 2013 Nov 24, Allison Stelling commented:

In chemistry and physics journals, there's something called "table of contents graphics"- one picture that "sums up" the findings of the whole paper, which are displayed with the just the title. (Here's mine from one of the papers I published for my PhD work Stelling AL, 2007, see the journal for the graphic: http://pubs.acs.org/doi/abs/10.1021/ja074074n.) I've published in both physical chemistry journals and biomedical journals, and it was interesting to note that this particular graphic was not required in biomedicine.

Searchable graphics and flowcharts for clinical trials would make life a lot easier, I think, esp. for practicing MDs who are quite busy and unfortunately have little time to "keep up with the news". (Esp. considering how fast the science "news" comes out these days- and the volume!)

Keyword searches are already most scientists' choice for discovering new literature- perhaps we should let the idea of bound journals with issues and word counts and constrained subjects fade away. (Don't worry, publishers will have still have very important tasks: organizing pre-publication checks on Ethics and study design etc. from experts; & digital data curation, organization, and efficient distribution.)

On 2013 Nov 24, John Sotos commented:

JAMA’s laudable effort to upgrade medical abstracts [1] represents only a syntactic improvement in communicating quantitative results. It was proposed by editors faced with reviewing multitudes of abstracts submitted to research meetings.

Of greater use to JAMA’s general medical readership, and especially to the innumerable members of the public who read JAMA abstracts online via the Pubmed system, would be a graphical flow chart describing each study’s design. Instead of syntactic sugar, this would provide at-a-glance understanding of what is often the most innovative part of a study.

Such charts are now familiar to readers, having been part of JAMA’s instructions to authors since at least 1998 [2]. However, because they are often laden with details [3], they are themselves candidates for abstraction.

Although Pubmed already supports graphics in its abstract pages, authors would be better specifying these proposed abstract-flow-charts declaratively, e.g. with an XML data description language. Pubmed could then, someday, support searches based on details of study design, thereby fulfilling the hope expressed during JAMA’s introduction of structured abstracts in 1991: to “allow more precise computerized literature searches” [4].

[1] Bauchner H, Henry R, Golub RM. The restructuring of structured abstracts: adding a table in the results section. JAMA. 2013; 309: 491-492.

[2] Anonymous. JAMA instructions for authors. JAMA. 1998; 279: 69-72.

[3] Paradise JL, Bluestone CD, Colborn DK, Bernard BS, Smith CG, Rockette HE, Kurs-Lasky M. Adenoidectomy and adenotonsillectomy for recurrent acute otitis media: parallel randomized clinical trials in children not previously treated with tympanostomy tubes. JAMA. 1999; 282: 945-53.

[4] Anonymous. Structuring abstracts to make them more informative. JAMA. 1991; 266: 116-117.

On 2013 Nov 24, John Sotos commented:

JAMA’s laudable effort to upgrade medical abstracts [1] represents only a syntactic improvement in communicating quantitative results. It was proposed by editors faced with reviewing multitudes of abstracts submitted to research meetings.

Of greater use to JAMA’s general medical readership, and especially to the innumerable members of the public who read JAMA abstracts online via the Pubmed system, would be a graphical flow chart describing each study’s design. Instead of syntactic sugar, this would provide at-a-glance understanding of what is often the most innovative part of a study.

Such charts are now familiar to readers, having been part of JAMA’s instructions to authors since at least 1998 [2]. However, because they are often laden with details [3], they are themselves candidates for abstraction.

Although Pubmed already supports graphics in its abstract pages, authors would be better specifying these proposed abstract-flow-charts declaratively, e.g. with an XML data description language. Pubmed could then, someday, support searches based on details of study design, thereby fulfilling the hope expressed during JAMA’s introduction of structured abstracts in 1991: to “allow more precise computerized literature searches” [4].

[1] Bauchner H, Henry R, Golub RM. The restructuring of structured abstracts: adding a table in the results section. JAMA. 2013; 309: 491-492.

[2] Anonymous. JAMA instructions for authors. JAMA. 1998; 279: 69-72.

[3] Paradise JL, Bluestone CD, Colborn DK, Bernard BS, Smith CG, Rockette HE, Kurs-Lasky M. Adenoidectomy and adenotonsillectomy for recurrent acute otitis media: parallel randomized clinical trials in children not previously treated with tympanostomy tubes. JAMA. 1999; 282: 945-53.

[4] Anonymous. Structuring abstracts to make them more informative. JAMA. 1991; 266: 116-117.