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May 2026
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Transcription and cohesin direct domain boundary spatial positioning and are linked to Friedreich’s ataxia

1
1. scibot 13 May 2026
  
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  DOI: 10.1016/j.molcel.2026.04.019
  
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sciencedirect.com/science/article/pii/S109727652600273X
Apr 2026
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PDS5 proteins control genome architecture by limiting the lifetime of cohesin-NIPBL complexes

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1. scibot 24 Apr 2026
  
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  DOI: 10.1016/j.molcel.2026.03.025
  
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sciencedirect.com/science/article/pii/S1097276526002017
Jan 2026
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CTCF/cohesin-binding sites are susceptible to replication-associated DNA damage and genomic instability in cancer cells

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1. scibot 27 Jan 2026
  
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  DOI: 10.1016/j.isci.2026.114646
  
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sciencedirect.com/science/article/pii/S2589004226000210
Jul 2025
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Cohesin-mediated stabilization of the CCAN complex at kinetochores in mitosis

1
1. scibot 29 Jul 2025
  
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  DOI: 10.1016/j.cub.2025.07.011
  
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sciencedirect.com/science/article/pii/S0960982225008772
Jun 2025
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Regulation of somatic hypermutation by higher-order chromatin structure

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1. scibot 28 Jun 2025
  
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  DOI: 10.1016/j.molcel.2025.06.003
  
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sciencedirect.com/science/article/pii/S1097276525005039
Mar 2025
www.cell.com www.cell.com

Binding domain mutations provide insight into CTCF’s relationship with chromatin and its contribution to gene regulation

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1. scibot 23 Mar 2025
  
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  DOI: 10.1016/j.xgen.2025.100813
  
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cell.com/cell-genomics/fulltext/S2666-979X(25)00069-2
Jan 2025
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LDB1 establishes multi-enhancer networks to regulate gene expression

1
1. scibot 03 Jan 2025
  
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  DOI: 10.1016/j.molcel.2024.11.037
  
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sciencedirect.com/science/article/pii/S1097276524009924
Dec 2024
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

A negatively-charged region within carboxy-terminal domain maintains proper CTCF DNA binding

1
1. scibot 14 Dec 2024
  
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  DOI: 10.1016/j.isci.2024.111452
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11667065/
Jul 2024
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STAG2 mutations reshape the cohesin-structured spatial chromatin architecture to drive gene regulation in acute myeloid leukemia

1
1. scibot 31 Jul 2024
  
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  DOI: 10.1016/j.celrep.2024.114498
  
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sciencedirect.com/science/article/pii/S2211124724008271
May 2024
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A CTCF-binding site in the Mdm1-Il22-Ifng locus shapes cytokine expression profiles and plays a critical role in early Th1 cell fate specification

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1. scibot 02 May 2024
  
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  DOI: 10.1016/j.immuni.2024.04.007
  
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sciencedirect.com/science/article/pii/S1074761324002127
Apr 2024
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SAFB restricts contact domain boundaries associated with L1 chimeric transcription

1
1. scibot 11 Apr 2024
  
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  DOI: 10.1016/j.molcel.2024.03.021
  
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sciencedirect.com/science/article/pii/S1097276524002314
Jan 2024
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PCGF6 controls murine Tuft cell differentiation via H3K9me2 modification independently of Polycomb repression

1
1. scibot 19 Jan 2024
  
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  DOI: 10.1016/j.devcel.2023.12.015
  
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sciencedirect.com/science/article/pii/S1534580723006962
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ZNF143 deletion alters enhancer/promoter looping and CTCF/cohesin geometry

1
1. scibot 11 Jan 2024
  
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  RRID:AB_2176601
  
  DOI: 10.1016/j.celrep.2023.113663
  
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sciencedirect.com/science/article/pii/S2211124723016741
Dec 2023
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Super-enhancers include classical enhancers and facilitators to fully activate gene expression

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1. scibot 16 Dec 2023
  
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  DOI: 10.1016/j.cell.2023.11.030
  
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sciencedirect.com/science/article/pii/S0092867423013168
Mar 2023
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Structural elements promote architectural stripe formation and facilitate ultra-long-range gene regulation at a human disease locus

1
1. scibot 30 Mar 2023
  
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  DOI: 10.1016/j.molcel.2023.03.009
  
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sciencedirect.com/science/article/pii/S1097276523001661
Feb 2023
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Multiscale 3D genome reorganization during skeletal muscle stem cell lineage progression and aging

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1. scibot 23 Feb 2023
  
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  DOI: 10.1126/sciadv.abo1360
  
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science.org/doi/10.1126/sciadv.abo1360
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Multiscale 3D genome reorganization during skeletal muscle stem cell lineage progression and aging

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1. scibot 23 Feb 2023
  
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  DOI: 10.1126/sciadv.abo1360
  
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ncbi.nlm.nih.gov/pmc/articles/PMC9937580/
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A de novo transcription-dependent TAD boundary underpins critical multiway interactions during antibody class switch recombination

1
1. scibot 03 Feb 2023
  
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  RRID:AB_2176601
  
  DOI: 10.1016/j.molcel.2023.01.014
  
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sciencedirect.com/science/article/pii/S1097276523000370
Dec 2022
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

A novel intergenic enhancer that regulates Bdnf expression in developing cortical neurons

1
1. scibot 30 Dec 2022
  
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  RRID:AB_2176601
  
  DOI: 10.1016/j.isci.2022.105695
  
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ncbi.nlm.nih.gov/pmc/articles/PMC9792897/
Nov 2022
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Essential role of MESP1-RING1A complex in cardiac differentiation

1
1. scibot 22 Nov 2022
  
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  RRID:AB_2176601
  
  DOI: 10.1016/j.devcel.2022.10.009
  
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sciencedirect.com/science/article/pii/S1534580722007614
Oct 2022
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Chromatin jets define the properties of cohesin-driven in vivo loop extrusion

1
1. scibot 05 Oct 2022
  
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  RRID:AB_2176601
  
  DOI: 10.1016/j.molcel.2022.09.003
  
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sciencedirect.com/science/article/pii/S1097276522008541
May 2022
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Alcohol induced increases in sperm Histone H3 lysine 4 trimethylation correlate with increased placental CTCF occupancy and altered developmental programming

1
1. scibot 26 May 2022
  
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  RRID:AB_2176601
  
  DOI: 10.1038/s41598-022-12188-3
  
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nature.com/articles/s41598-022-12188-3
Apr 2022
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Promoter and enhancer RNAs regulate chromatin reorganization and activation of miR-10b/HOXD locus, and neoplastic transformation in glioma

1
1. scibot 07 Apr 2022
  
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  RRID:AB_2176601
  
  DOI: 10.1016/j.molcel.2022.03.018
  
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sciencedirect.com/science/article/pii/S1097276522002568
Feb 2022
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HOTTIP-dependent R-loop formation regulates CTCF boundary activity and TAD integrity in leukemia

1
1. scibot 18 Feb 2022
  
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  RRID:AB_2176601
  
  DOI: 10.1016/j.molcel.2022.01.014
  
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sciencedirect.com/science/article/pii/S1097276522000570
Dec 2021
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Jpx RNA regulates CTCF anchor site selection and formation of chromosome loops

1
1. scibot 02 Dec 2021
  
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  RRID:AB_2176601
  
  DOI: 10.1016/j.cell.2021.11.012
  
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sciencedirect.com/science/article/pii/S0092867421013271
Aug 2021
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Untitled document

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1. scibot 03 Aug 2021
  
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  DOI: 10.1016/j.molcel.2018.11.001
  
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ncbi.nlm.nih.gov/pmc/articles/PMC6344341/
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Untitled document

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  DOI: 10.1038/s41586-018-0845-0
  
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nature.com/articles/s41586-018-0845-0
Jul 2021
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Gain of CTCF-Anchored Chromatin Loops Marks the Exit from Naive Pluripotency

1
1. scibot 27 Jul 2021
  
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  DOI: 10.1016/j.cels.2018.09.003
  
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  RRID:AB_2176601 RRIDCUR:SyntaxError
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sciencedirect.com/science/article/pii/S2405471218303892
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Architectural Proteins and Pluripotency Factors Cooperate to Orchestrate the Transcriptional Response of hESCs to Temperature Stress

1
1. scibot 27 Jul 2021
  
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  RRID:AB_21176601
  
  DOI: 10.1016/j.molcel.2018.07.012
  
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sciencedirect.com/science/article/pii/S1097276518305811
www.cell.com www.cell.com

Transcription-mediated supercoiling regulates genome folding and loop formation

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1. scibot 23 Jul 2021
  
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  DOI: 10.1016/j.molcel.2021.06.009
  
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cell.com/molecular-cell/fulltext/S1097-2765(21)00456-1
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Interplay between CTCF boundaries and a super enhancer controls cohesin extrusion trajectories and gene expression

1
1. scibot 01 Jul 2021
  
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  DOI: 10.1016/j.molcel.2021.06.008
  
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sciencedirect.com/science/article/pii/S109727652100455X
Jun 2021
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Suv4-20h2 protects against influenza virus infection by suppression of chromatin loop formation

1
1. scibot 26 Jun 2021
  
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  DOI: 10.1016/j.isci.2021.102660
  
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ncbi.nlm.nih.gov/pmc/articles/PMC8209278/
May 2021
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Balancing cohesin eviction and retention prevents aberrant chromosomal interactions, Polycomb-mediated repression, and X-inactivation

1
1. scibot 08 May 2021
  
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  DOI: 10.1016/j.molcel.2021.02.031
  
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sciencedirect.com/science/article/pii/S1097276521001416
Apr 2021
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STAG2 mutations alter CTCF-anchored loop extrusion, reduce cis-regulatory interactions and EWSR1-FLI1 activity in Ewing sarcoma

1
1. scibot 30 Apr 2021
  
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  DOI: 10.1016/j.ccell.2021.04.001
  
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sciencedirect.com/science/article/pii/S1535610821002087
Feb 2021
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Distinct properties and functions of CTCF revealed by a rapidly inducible degron system

1
1. scibot 25 Feb 2021
  
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  DOI: 10.1016/j.celrep.2021.108783
  
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  RRIDCUR:Validated RRID:AB_2176601
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sciencedirect.com/science/article/pii/S2211124721000966
Nov 2020
pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov

Activation of Clustered IFNγ Target Genes Drives Cohesin-Controlled Transcriptional Memory

1
1. scibot 03 Nov 2020
  
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  AB_2176601
  
  DOI: 10.1016/j.molcel.2020.10.005
  
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pubmed.ncbi.nlm.nih.gov/33108759/
Sep 2020
pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov

Loss of Extreme Long-Range Enhancers in Human Neural Crest Drives a Craniofacial Disorder

1
1. scibot 29 Sep 2020
  
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  RRID:AB_2176601
  
  DOI: 10.1016/j.stem.2020.09.001
  
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Cohesin Removal Reprograms Gene Expression upon Mitotic Entry

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1. scibot 17 Sep 2020
  
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  RRID:AB_2176601
  
  DOI: 10.1016/j.molcel.2020.01.023
  
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Enhancer RNAs Mediate Estrogen-Induced Decommissioning of Selective Enhancers by Recruiting ERα and Its Cofactor

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1. scibot 10 Sep 2020
  
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  RRID:AB_2176601
  
  DOI: 10.1016/j.celrep.2020.107803
  
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Repression of Transcription at DNA Breaks Requires Cohesin throughout Interphase and Prevents Genome Instability

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1. scibot 06 Sep 2020
  
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  DOI: 10.1016/j.molcel.2018.11.001
  
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cell.com/molecular-cell/abstract/S1097-2765(18)30943-2
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A Pliable Mediator Acts as a Functional Rather Than an Architectural Bridge between Promoters and Enhancers

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1. scibot 13 Jan 2020
  
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  DOI: 10.1016/j.cell.2019.07.011
  
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The ChAHP Complex Counteracts Chromatin Looping at CTCF Sites that Emerged from SINE Expansions in Mouse

1
1. scibot 13 Jan 2020
  
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  DOI: 10.1016/j.cell.2019.08.007
  
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Topoisomerase II-Induced Chromosome Breakage and Translocation Is Determined by Chromosome Architecture and Transcriptional Activity

1
1. scibot 13 Jan 2020
  
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  RRID:AB_2176601
  
  DOI: 10.1016/j.molcel.2019.04.030
  
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Untitled document

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1. scibot 13 Jan 2020
  
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  RRID:AB_2176601
  
  DOI: 10.1016/j.cub.2019.02.007
  
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sciencedirect.com/science/article/pii/S0960982219301460
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Untitled document

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  DOI: 10.1038/s41586-018-0845-0
  
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nature.com/articles/s41586-018-0845-0
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Untitled document

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1. scibot 13 Jan 2020
  
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  RRID:AB_2176601
  
  DOI: 10.1016/j.molcel.2018.11.001
  
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sciencedirect.com/science/article/pii/S1097276518309432
Nov 2018
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The Nuclear Receptor PPARγ Controls Progressive Macrophage Polarization as a Ligand-Insensitive Epigenomic Ratchet of Transcriptional Memory

1
1. scibot 05 Nov 2018
  
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Polymer Simulations of Heteromorphic Chromatin Predict the 3D Folding of Complex Genomic Loci

1
1. scibot 05 Nov 2018
  
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Computational prediction of CTCF/cohesin-based intra-TAD loops that insulate chromatin contacts and gene expression in mouse liver

1
1. scibot 05 Nov 2018
  
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HMGB2 Loss upon Senescence Entry Disrupts Genomic Organization and Induces CTCF Clustering across Cell Types

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Cohesin Loss Eliminates All Loop Domains

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1. scibot 05 Nov 2018
  
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sciencedirect.com/science/article/pii/S0092867417311200
Nov 2017
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Genome Organization Drives Chromosome Fragility

1
1. scibot 08 Nov 2017
  
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  AB_2176601
  
  Curator: @chewbeccax
  
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Multi-tiered Reorganization of the Genome during B Cell Affinity Maturation Anchored by a Germinal Center-Specific Locus Control Region

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1. scibot 08 Nov 2017
  
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sciencedirect.com/science/article/pii/S1074761316303363