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PDS5 proteins control genome architecture by limiting the lifetime of cohesin-NIPBL complexes

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sciencedirect.com/science/article/pii/S1097276526002017
Dec 2025
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JMJD2 regulates enhancer–promoter interactions via biomolecular condensate formation

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  DOI: 10.1038/s41588-025-02415-8
  
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nature.com/articles/s41588-025-02415-8
Sep 2024
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Purification of micronuclei from cultured cells by flow cytometry

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sciencedirect.com/science/article/pii/S266616672100085X
Apr 2024
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The SPATA5-SPATA5L1 ATPase complex directs replisome proteostasis to ensure genome integrity

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  DOI: 10.1016/j.cell.2024.03.002
  
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sciencedirect.com/science/article/pii/S0092867424002502
Feb 2024
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Myeloid/natural killer (NK) cell precursor acute leukemia as a distinct leukemia type

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  DOI: 10.1126/sciadv.adj4407
  
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ncbi.nlm.nih.gov/pmc/articles/PMC10848711/
Jan 2024
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Myeloid/natural killer (NK) cell precursor acute leukemia as a distinct leukemia type

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science.org/doi/10.1126/sciadv.adj4407
Nov 2023
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Lineage-specific 3D genome organization is assembled at multiple scales by IKAROS

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sciencedirect.com/science/article/pii/S0092867423011741
Sep 2023
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Perturbations in 3D genome organization can promote acquired drug resistance

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1. scibot 30 Sep 2023
  
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  DOI: 10.1016/j.celrep.2023.113124
  
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sciencedirect.com/science/article/pii/S2211124723011361
Aug 2023
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PIIS221112472300952X-html.html

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52.53.155.43/1abfd5fba02bda950654c5dfd88ce712e0bc4f04/PIIS221112472300952X-html.html
Apr 2023
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A genome-wide CRISPR screen maps endogenous regulators of PPARG gene expression in bladder cancer

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sciencedirect.com/science/article/pii/S2589004223006028
Mar 2023
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GRHL2 and AP2a coordinate early surface ectoderm lineage commitment during development

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  DOI: 10.1016/j.isci.2023.106125
  
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sciencedirect.com/science/article/pii/S258900422300202X
Sep 2022
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STAG2 promotes the myelination transcriptional program in oligodendrocytes

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1. scibot 08 Sep 2022
  
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  DOI: 10.7554/eLife.77848
  
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ncbi.nlm.nih.gov/pmc/articles/PMC9439679/
Aug 2022
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SOX transcription factors direct TCF-independent WNT/β-catenin responsive transcription to govern cell fate in human pluripotent stem cells

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  DOI: 10.1016/j.celrep.2022.111247
  
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sciencedirect.com/science/article/pii/S2211124722010658
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Mitotic DNA synthesis is caused by transcription-replication conflicts in BRCA2-deficient cells

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  DOI: 10.1016/j.molcel.2022.07.011
  
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sciencedirect.com/science/article/pii/S1097276522007079
Jun 2022
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TCF-1 promotes chromatin interactions across topologically associating domains in T cell progenitors

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1. scibot 22 Jun 2022
  
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  DOI: 10.1038/s41590-022-01232-z
  
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nature.com/articles/s41590-022-01232-z
Feb 2022
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EBF1 nuclear repositioning instructs chromatin refolding to promote therapy resistance in T leukemic cells

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1. scibot 23 Feb 2022
  
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  DOI: 10.1016/j.molcel.2022.01.015
  
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sciencedirect.com/science/article/pii/S1097276522000582
Jan 2022
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SETDB1/NSD-dependent H3K9me3/H3K36me3 dual heterochromatin maintains gene expression profiles by bookmarking poised enhancers

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1. scibot 26 Jan 2022
  
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  DOI: 10.1016/j.molcel.2021.12.037
  
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sciencedirect.com/science/article/pii/S1097276521011424
Aug 2021
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Untitled document

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  DOI: 10.1016/j.celrep.2019.03.067
  
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sciencedirect.com/science/article/pii/S2211124719303973
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Untitled document

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  DOI: 10.1016/j.molcel.2018.10.039
  
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sciencedirect.com/science/article/pii/S109727651830933X
Jun 2021
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STAG2 loss rewires oncogenic and developmental programs to promote metastasis in Ewing sarcoma

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  DOI: 10.1016/j.ccell.2021.05.007
  
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cell.com/cancer-cell/fulltext/S1535-6108(21)00273-7
May 2021
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Phase separation of OCT4 controls TAD reorganization to promote cell fate transitions

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  DOI: 10.1016/j.stem.2021.04.023
  
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sciencedirect.com/science/article/pii/S1934590921001818
Apr 2021
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STAG2 mutations alter CTCF-anchored loop extrusion, reduce cis-regulatory interactions and EWSR1-FLI1 activity in Ewing sarcoma

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sciencedirect.com/science/article/pii/S1535610821002087
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Opening of cohesin’s SMC ring is essential for timely DNA replication and DNA loop formation

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sciencedirect.com/science/article/pii/S2211124721003132
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Large-Scale Topological Changes Restrain Malignant Progression in Colorectal Cancer

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  DOI: 10.1016/j.cell.2020.07.030
  
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sciencedirect.com/science/article/pii/S0092867420309387
Mar 2021
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Purification of micronuclei from cultured cells by flow cytometry

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sciencedirect.com/science/article/pii/S266616672100085X
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ER-directed TREX1 limits cGAS activation at micronuclei

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  DOI: 10.1016/j.molcel.2020.12.037
  
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sciencedirect.com/science/article/pii/S1097276520309588
Sep 2020
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A WIZ/Cohesin/CTCF Complex Anchors DNA Loops to Define Gene Expression and Cell Identity

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sciencedirect.com/science/article/pii/S2211124720303934
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MYC Controls the Epstein-Barr Virus Lytic Switch

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1. scibot 17 Sep 2020
  
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sciencedirect.com/science/article/pii/S1097276520301933
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ESCO1 and CTCF enable formation of long chromatin loops by protecting cohesinSTAG1 from WAPL

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  DOI: 10.7554/eLife.52091
  
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ncbi.nlm.nih.gov/pmc/articles/PMC7054000/
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WAPL-Dependent Repair of Damaged DNA Replication Forks Underlies Oncogene-Induced Loss of Sister Chromatid Cohesion

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sciencedirect.com/science/article/pii/S1534580720300563
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Genetic Variation in Type 1 Diabetes Reconfigures the 3D Chromatin Organization of T Cells and Alters Gene Expression

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  DOI: 10.1016/j.immuni.2020.01.003
  
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sciencedirect.com/science/article/pii/S1074761320300303
Jan 2020
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lncRNA-Induced Spread of Polycomb Controlled by Genome Architecture, RNA Abundance, and CpG Island DNA

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  DOI: 10.1016/j.molcel.2019.05.028
  
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sciencedirect.com/science/article/pii/S1097276519304009
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Distinct Classes of Chromatin Loops Revealed by Deletion of an RNA-Binding Region in CTCF

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  DOI: 10.1016/j.molcel.2019.07.039
  
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cell.com/molecular-cell/fulltext/S1097-2765(19)30594-5
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Untitled document

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  DOI: 10.1016/j.celrep.2019.03.067
  
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ncbi.nlm.nih.gov/pmc/articles/PMC6484776/
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Oncogenic Notch Promotes Long-Range Regulatory Interactions within Hyperconnected 3D Cliques

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  DOI: 10.1016/j.molcel.2019.01.006
  
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The Evf2 Ultraconserved Enhancer lncRNA Functionally and Spatially Organizes Megabase Distant Genes in the Developing Forebrain

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GRHL2-Dependent Enhancer Switching Maintains a Pluripotent Stem Cell Transcriptional Subnetwork after Exit from Naive Pluripotency

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SRC-3 Coactivator Governs Dynamic Estrogen-Induced Chromatin Looping Interactions during Transcription

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Untitled document

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SMC1α Substitutes for Many Meiotic Functions of SMC1β but Cannot Protect Telomeres from Damage

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Cohesin Loss Eliminates All Loop Domains

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CTCF-Mediated Enhancer-Promoter Interaction Is a Critical Regulator of Cell-to-Cell Variation of Gene Expression

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Interferon-γ Represses M2 Gene Expression in Human Macrophages by Disassembling Enhancers Bound by the Transcription Factor MAF

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Dynamic Rewiring of Promoter-Anchored Chromatin Loops during Adipocyte Differentiation

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Mice deficient of Myc super-enhancer region reveal differential control mechanism between normal and pathological growth

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The BET Protein BRD2 Cooperates with CTCF to Enforce Transcriptional and Architectural Boundaries

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