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Multi-modal image analysis for large-scale cancer tissue studies within IMMUcan

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1. scibot 23 Oct 2025
  
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  DOI: 10.1016/j.crmeth.2025.101170
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12539258/
Oct 2025
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Regionally mapped astrocytic responses to cortical and white matter stroke show differential roles in astrocyte-induced vascular remodeling

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1. scibot 11 Oct 2025
  
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  DOI: 10.1016/j.neuron.2025.09.023
  
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sciencedirect.com/science/article/pii/S0896627325007111
Sep 2025
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Aberrant coupling of glutamate and tyrosine kinase receptors enables neuronal control of brain-tumor growth

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1. scibot 03 Sep 2025
  
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  DOI: 10.1016/j.neuron.2025.08.005
  
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sciencedirect.com/science/article/pii/S0896627325005914
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1-s2.0-S2589004225017353-main-html.html

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  AB_396287
  
  DOI: 10.1016/j.isci.2025.113474
  
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52.53.155.43/e7e2b86a0b8b3a8cce68ca935e4321249755b77b/1-s2.0-S2589004225017353-main-html.html
Aug 2025
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An inducible model of human post-implantation development derived from primed and naive stem cells

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1. scibot 30 Aug 2025
  
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  DOI: 10.1016/j.stem.2025.08.005
  
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sciencedirect.com/science/article/pii/S1934590925002978
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1-s2.0-S2589004225016621-main-html.html

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  DOI: 10.1016/j.isci.2025.113401
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12441700/
Jul 2025
www.cell.com www.cell.com

Imeglimin suppresses glucagon secretion and induces a loss of α cell identity

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  DOI: 10.1016/j.xcrm.2025.102254
  
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cell.com/cell-reports-medicine/fulltext/S2666-3791(25)00327-1
Apr 2025
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The extra-islet pancreas supports autoimmunity in human type 1 diabetes

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1. scibot 19 Apr 2025
  
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  DOI: 10.7554/eLife.100535
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11999700/
Mar 2025
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Forebrain Eml1 depletion reveals early centrosomal dysfunction causing subcortical heterotopia

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1. scibot 28 Mar 2025
  
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  DOI: 10.1083/jcb.202310157
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11450323/
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Translation dysregulation in cancer as a source for targetable antigens

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  DOI: 10.1016/j.ccell.2025.03.003
  
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sciencedirect.com/science/article/pii/S1535610825000820
Feb 2025
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Neural stem cell relay from B1 to B2 cells in the adult mouse ventricular-subventricular zone

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  DOI: 10.1016/j.celrep.2025.115264
  
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sciencedirect.com/science/article/pii/S221112472500035X
Jan 2025
52.53.155.43 52.53.155.43

1-s2.0-S2589004225001166-main-html.html

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1. scibot 23 Jan 2025
  
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  DOI: 10.1016/j.isci.2025.111856
  
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52.53.155.43/f7a3e96df7edf052e7c2acc984abc4e530aec8c5/1-s2.0-S2589004225001166-main-html.html
Sep 2024
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Suppressor of fused controls perinatal expansion and quiescence of future dentate adult neural stem cells

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1. scibot 25 Sep 2024
  
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  DOI: 10.7554/eLife.42918
  
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ncbi.nlm.nih.gov/pmc/articles/PMC6459675/
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Dual function of PHF16 in reinstating homeostasis of murine intestinal epithelium after crypt regeneration

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1. scibot 04 Sep 2024
  
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  DOI: 10.1016/j.devcel.2024.08.009
  
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sciencedirect.com/science/article/pii/S1534580724004921
Aug 2024
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A single-cell transcriptomic map of the developing Atoh1 lineage identifies neural fate decisions and neuronal diversity in the hindbrain

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1. scibot 19 Aug 2024
  
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  DOI: 10.1016/j.devcel.2024.07.007
  
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sciencedirect.com/science/article/pii/S153458072400443X
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Therapy-induced DNA methylation inactivates MCT1 and renders tumor cells vulnerable to MCT4 inhibition

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1. scibot 02 Aug 2024
  
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  DOI: 10.1016/j.celrep.2021.109202
  
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sciencedirect.com/science/article/pii/S2211124721005519
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Postnatal growth of the human pons: A morphometric and immunohistochemical analysis

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1. scibot 02 Aug 2024
  
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  DOI: 10.1002/cne.23690
  
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  RRID:AB_396287 RRIDCUR:Validated
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onlinelibrary.wiley.com/doi/10.1002/cne.23690/full
Jul 2024
www.thelancet.com www.thelancet.com

Effect of ultrasound-mediated blood-spinal cord barrier opening on survival and motor function in females in an amyotrophic lateral sclerosis mouse model

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1. scibot 18 Jul 2024
  
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  DOI: 10.1016/j.ebiom.2024.105235
  
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thelancet.com/journals/ebiom/article/PIIS2352-3964(24)00270-6/abstract
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DCX knockout ferret reveals a neurogenic mechanism in cortical development

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1. scibot 17 Jul 2024
  
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  DOI: 10.1016/j.celrep.2024.114508
  
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sciencedirect.com/science/article/pii/S2211124724008374
Jun 2024
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

L-RNA aptamer-based CXCL12 inhibition combined with radiotherapy in newly-diagnosed glioblastoma: dose escalation of the phase I/II GLORIA trial

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  DOI: 10.1038/s41467-024-48416-9
  
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ncbi.nlm.nih.gov/pmc/articles/PMC11133480/
May 2024
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Olfactory neuroblastoma mimics molecular heterogeneity and lineage trajectories of small-cell lung cancer

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1. scibot 24 May 2024
  
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  DOI: 10.1016/j.ccell.2024.05.003
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11186085/
Jan 2024
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Cancer-associated fibroblast phenotypes are associated with patient outcome in non-small cell lung cancer

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  DOI: 10.1016/j.ccell.2023.12.021
  
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sciencedirect.com/science/article/pii/S153561082300449X
Dec 2023
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Delayed maturation and migration of excitatory neurons in the juvenile mouse paralaminar amygdala

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  DOI: 10.1016/j.neuron.2023.11.010
  
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sciencedirect.com/science/article/pii/S089662732300884X
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Multi-chamber cardioids unravel human heart development and cardiac defects

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  DOI: 10.1016/j.cell.2023.10.030
  
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sciencedirect.com/science/article/pii/S0092867423011819
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Human iPSC-derived renal collecting duct organoid model cystogenesis in ADPKD

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  DOI: 10.1016/j.celrep.2023.113431
  
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sciencedirect.com/science/article/pii/S2211124723014432
Nov 2023
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FMRP phosphorylation modulates neuronal translation through YTHDF1

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1. scibot 28 Nov 2023
  
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  DOI: 10.1016/j.molcel.2023.10.028
  
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sciencedirect.com/science/article/pii/S1097276523008651
Oct 2023
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Desmoplastic stromal signatures predict patient outcomes in pancreatic ductal adenocarcinoma

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  DOI: 10.1016/j.xcrm.2023.101248
  
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sciencedirect.com/science/article/pii/S2666379123004251
Sep 2023
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OLIG2 translocates to chromosomes during mitosis via a temperature downshift: a novel neural cold response of mitotic bookmarking

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1. scibot 30 Sep 2023
  
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  DOI: 10.1016/j.gene.2023.147829
  
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sciencedirect.com/science/article/pii/S0378111923006704
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Highly multiplexed spatial analysis identifies tissue-resident memory T cells as drivers of ulcerative and immune checkpoint inhibitor induced colitis

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  DOI: 10.1016/j.isci.2023.107891
  
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ncbi.nlm.nih.gov/pmc/articles/PMC10520880/
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Lmx1a is a master regulator of the cortical hem

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  DOI: 10.7554/eLife.84095
  
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  DOI: 10.7554/eLife.84095
  
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ncbi.nlm.nih.gov/pmc/articles/PMC10508884/
Aug 2023
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FoxM1 coordinates cell division, protein synthesis, and mitochondrial activity in a subset of β cells during acute metabolic stress

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  DOI: 10.1016/j.celrep.2023.112986
  
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sciencedirect.com/science/article/pii/S221112472300997X
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Single-cell analysis of the developing human ovary defines distinct insights into ovarian somatic and germline progenitors

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  DOI: 10.1016/j.devcel.2023.07.014
  
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sciencedirect.com/science/article/pii/S1534580723003611
May 2023
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Extracellular vesicles in fatty liver promote a metastatic tumor microenvironment

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1. scibot 12 May 2023
  
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  DOI: 10.1016/j.cmet.2023.04.013
  
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sciencedirect.com/science/article/pii/S1550413123001407
Mar 2023
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Multiplex imaging of breast cancer lymph node metastases identifies prognostic single-cell populations independent of clinical classifiers

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1. scibot 18 Mar 2023
  
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  DOI: 10.1016/j.xcrm.2023.100977
  
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sciencedirect.com/science/article/pii/S2666379123000836
Jan 2023
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RNA mis-splicing drives viral mimicry response after DNMTi therapy in SETD2-mutant kidney cancer

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1. scibot 21 Jan 2023
  
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  DOI: 10.1016/j.celrep.2023.112016
  
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sciencedirect.com/science/article/pii/S221112472300027X
Dec 2022
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B cell expansion hinders the stroma-epithelium regenerative cross talk during mucosal healing

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1. scibot 04 Dec 2022
  
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Ensembles of endothelial and mural cells promote angiogenesis in prenatal human brain

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Defining HPV-specific B cell responses in head and neck cancer patients

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A diminished immune response underlies age-related SARS-CoV-2 pathologies

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Interleukin-6 blockade abrogates immunotherapy toxicity and promotes tumor immunity

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Hepatoma Derived Growth Factor Enhances Oligodendrocyte Genesis from Subventricular Zone Precursor Cells - Yutong Li, Nicole Leanne Dittmann, Adrianne Eve Scovil Watson, Monique Marylin Alves de Almeida, Tim Footz, Anastassia Voronova, 2022

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Protocol for serial organoid formation assay using primary colorectal cancer tissues to evaluate cancer stem cell activity

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Generation of human induced pluripotent stem cell-derived cerebral organoids for cellular and molecular characterization

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Cell cycle defects underlie childhood-onset cardiomyopathy associated with Noonan syndrome

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MATISSE: An analysis protocol for combining imaging mass cytometry with fluorescence microscopy to generate single-cell data

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A nonhuman primate model of vertical sleeve gastrectomy facilitates mechanistic and translational research in human obesity

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Pharmacological targeting of Sam68 functions in colorectal cancer stem cells

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Microbial regulation of hexokinase 2 links mitochondrial metabolism and cell death in colitis

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The allergy mediator histamine confers resistanceto immunotherapy in cancer patients via activationof the macrophage histamine receptor H1

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Sensitive timing of undifferentiation in oligodendrocyte progenitor cells and their enhanced maturation in primary visual cortex of binocularly enucleated mice

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YAP regulates alveolar epithelial cell differentiation and AGER via NFIB/KLF5/NKX2-1

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Untitled document

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Migrating Interneurons Secrete Fractalkine to Promote Oligodendrocyte Formation in the Developing Mammalian Brain

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A Translational Repression Complex in Developing Mammalian Neural Stem Cells that Regulates Neuronal Specification

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The Divalent Metal Transporter 1 (DMT1) Is Required for Iron Uptake and Normal Development of Oligodendrocyte Progenitor Cells

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Patient-derived iPSC-cerebral organoid modeling of the 17q11.2 microdeletion syndrome establishes CRLF3 as a critical regulator of neurogenesis

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Deep spatial profiling of human COVID-19 brains reveals neuroinflammation with distinct microanatomical microglia-T-cell interactions

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NF1 mutation drives neuronal activity-dependent initiation of optic glioma

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DIAPH3 deficiency links microtubules to mitotic errors, defective neurogenesis, and brain dysfunction

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Single-cell analysis of the developing human testis reveals somatic niche cell specification and fetal germline stem cell establishment

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Combined Omics Approaches Reveal the Roles of Non-canonical WNT7B Signaling and YY1 in the Proliferation of Human Pancreatic Progenitor Cells

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Modeling human retinoblastoma using embryonic stem cell-derived retinal organoids

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Short-term exposure to intermittent hypoxia leads to changes in gene expression seen in chronic pulmonary disease

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Feb 2021
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Early ethanol exposure inhibits the differentiation of hippocampal dentate gyrus granule cells in a mouse model of Fetal Alcohol Spectrum Disorders

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A distinct innate immune signature marks progression from mild to severe COVID-19

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Reciprocal Interaction between Vascular Filopodia and Neural Stem Cells Shapes Neurogenesis in the Ventral Telencephalon

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Oxygen Tension and the VHL-Hif1α Pathway Determine Onset of Neuronal Polarization and Cerebellar Germinal Zone Exit

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Astrocytic trans-Differentiation Completes a Multicellular Paracrine Feedback Loop Required for Medulloblastoma Tumor Growth

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Cortical Neural Stem Cell Lineage Progression Is Regulated by Extrinsic Signaling Molecule Sonic Hedgehog

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The Diabetes Gene JAZF1 Is Essential for the Homeostatic Control of Ribosome Biogenesis and Function in Metabolic Stress

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  DOI: 10.1016/j.celrep.2020.107846
  
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Bladder cancer therapy without toxicity ‐ A dose‐escalation study of alpha1‐oleate

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  mouse monoclonal anti‐Ki‐67
  
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Large-Scale HLA Tetramer Tracking of T Cells during Dengue Infection Reveals Broad Acute Activation and Differentiation into Two Memory Cell Fates

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Mapping the Lineage Relationship between CXCR5+ and CXCR5− CD4+ T Cells in HIV-Infected Human Lymph Nodes

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Mutations in the Heterotopia Gene Eml1/EML1 Severely Disrupt the Formation of Primary Cilia

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  DOI: 10.1016/j.celrep.2019.06.096
  
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Early-generated interneurons regulate neuronal circuit formation during early postnatal development

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  DOI: 10.7554/eLife.44649
  
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N-cadherin-regulated FGFR ubiquitination and degradation control mammalian neocortical projection neuron migration

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  DOI: 10.7554/eLife.47673
  
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Early dorsomedial tissue interactions regulate gyrification of distal neocortex

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  DOI: 10.1038/s41467-019-12913-z
  
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Untitled document

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  DOI: 10.1016/j.cmet.2018.11.014
  
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High-Dimensional Analysis Delineates Myeloid and Lymphoid Compartment Remodeling during Successful Immune-Checkpoint Cancer Therapy

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In Vivo Regulation of Oligodendrocyte Precursor Cell Proliferation and Differentiation by the AMPA-Receptor Subunit GluA2

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Chd2 Is Necessary for Neural Circuit Development and Long-Term Memory

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Cellular localization of the cell cycle inhibitor Cdkn1c controls growth arrest of adult skeletal muscle stem cells

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Identification of an Early Unipotent Neutrophil Progenitor with Pro-tumoral Activity in Mouse and Human Bone Marrow

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Untitled document

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Untitled document

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Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment

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Preterm birth disrupts cerebellar development by affecting granule cell proliferation program and Bergmann glia

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Epigenomic-Guided Mass Cytometry Profiling Reveals Disease-Specific Features of Exhausted CD8 T Cells

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Extracellular Lactate Dehydrogenase A Release From Damaged Neurons Drives Central Nervous System Angiogenesis

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Migrating Interneurons Secrete Fractalkine to Promote Oligodendrocyte Formation in the Developing Mammalian Brain

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Dose‐dependent short‐ and long‐term effects of ionizing irradiation on neural stem cells in murine hippocampal tissue cultures: neuroprotective potential of resveratrol

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Postnatal growth of the human pons: A morphometric and immunohistochemical analysis

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