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Jun 2026
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

CoCUT&Tag maps linked chromatin states at single-molecule, single-cell resolution

1
1. scibot 06 Jun 2026
  
  in Public
  
  Addgene_124601
  
  DOI: 10.64898/2026.04.27.721191
  
  Resource: RRID:Addgene_124601
  
  Curator: @scibot
  
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  RRID:Addgene_124601
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pmc.ncbi.nlm.nih.gov/articles/PMC13142410/
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

CUT&Tag for High‐Resolution Epigenomic Profiling From a Low Amount of Arabidopsis Tissue

1
1. scibot 06 Jun 2026
  
  in Public
  
  Plasmid_124601
  
  DOI: 10.1002/pld3.70161
  
  Resource: RRID:Addgene_124601
  
  Curator: @scibot
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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scibot

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pmc.ncbi.nlm.nih.gov/articles/PMC13067811/
www.sciencedirect.com www.sciencedirect.com

Single-cell mapping of regulatory DNA-protein interactions

1
1. scibot 05 Jun 2026
  
  in Public
  
  Addgene_124601
  
  DOI: 10.1016/j.cell.2026.05.014
  
  Resource: RRID:Addgene_124601
  
  Curator: @scibot
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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sciencedirect.com/science/article/pii/S0092867426005738
May 2026
www.biorxiv.org www.biorxiv.org

Convergent evolution of cluster-wide Hox gene regulation in Bilateria

1
1. scibot 29 May 2026
  
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  124601
  
  DOI: 10.64898/2026.05.18.725834
  
  Resource: RRID:Addgene_124601
  
  Curator: @dhovakimyan1
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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biorxiv.org/content/10.64898/2026.05.18.725834v1
Apr 2026
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

The chromatin remodeller CHD4 regulates transcription factor binding to both prevent activation of silent enhancers and maintain active regulatory elements

1
1. scibot 24 Apr 2026
  
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  RRID:Addgene_124601
  
  DOI: 10.7554/eLife.109280
  
  Resource: RRID:Addgene_124601
  
  Curator: @nmaralla
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRIDCUR:Unresolved RRID:Addgene_124601
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RRIDCUR:Unresolved

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scibot

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pmc.ncbi.nlm.nih.gov/articles/PMC12867480/
Jan 2026
www.sciencedirect.com www.sciencedirect.com

Tissue-specific restriction of transposon-derived regulatory elements safeguards cell-type identity

1
1. scibot 15 Jan 2026
  
  in Public
  
  Plasmid_124601
  
  DOI: 10.1016/j.celrep.2025.116817
  
  Resource: RRID:Addgene_124601
  
  Curator: @scibot
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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sciencedirect.com/science/article/pii/S221112472501589X
elifesciences.org elifesciences.org

The chromatin remodeller CHD4 regulates transcription factor binding to both prevent activation of silent enhancers and maintain active regulatory elements

1
1. scibot 08 Jan 2026
  
  in Public
  
  124601
  
  DOI: 10.7554/eLife.109280.1
  
  Resource: RRID:Addgene_124601
  
  Curator: @dhovakimyan1
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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elifesciences.org/reviewed-preprints/109280
Nov 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Decoding transcriptional identity during neuron-astroglia cell fate driven by RAR-specific agonists

1
1. scibot 21 Nov 2025
  
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  addgene_124601
  
  DOI: 10.1093/narmme/ugaf018
  
  Resource: RRID:Addgene_124601
  
  Curator: @scibot
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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pmc.ncbi.nlm.nih.gov/articles/PMC12430019/
Sep 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Cancer cells subvert the primate-specific KRAB zinc finger protein ZNF93 to control APOBEC3B

1
1. scibot 06 Sep 2025
  
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  Addgene_124601
  
  DOI: 10.1073/pnas.2505021122
  
  Resource: RRID:Addgene_124601
  
  Curator: @scibot
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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pmc.ncbi.nlm.nih.gov/articles/PMC12403153/
Aug 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

An eRNA transcription checkpoint for diverse signal-dependent enhancer activation programs

1
1. scibot 11 Aug 2025
  
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  124601
  
  DOI: 10.1038/s41588-025-02138-w
  
  Resource: RRID:Addgene_124601
  
  Curator: @olekpark
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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pmc.ncbi.nlm.nih.gov/articles/PMC12286646/
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

DynaTag for efficient mapping of transcription factors in low-input samples and at single-cell resolution

1
1. scibot 11 Aug 2025
  
  in Public
  
  124601
  
  DOI: 10.1038/s41467-025-61797-9
  
  Resource: RRID:Addgene_124601
  
  Curator: @olekpark
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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pmc.ncbi.nlm.nih.gov/articles/PMC12304361/
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Combinatorial profiling of multiple histone modifications and transcriptome in single cells using scMTR-seq

1
1. scibot 10 Aug 2025
  
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  124601
  
  DOI: 10.1126/sciadv.adu3308
  
  Resource: RRID:Addgene_124601
  
  Curator: @olekpark
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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pmc.ncbi.nlm.nih.gov/articles/PMC12327464/
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

NanoTag is an improved method to map interactions between DNA and proteins not requiring IgG

1
1. scibot 10 Aug 2025
  
  in Public
  
  plasmid_124601
  
  DOI: 10.1038/s41598-025-13316-5
  
  Resource: RRID:Addgene_124601
  
  Curator: @scibot
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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pmc.ncbi.nlm.nih.gov/articles/PMC12325602/
Jul 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Tissular chromatin-state cartography based on double-barcoded DNA arrays that capture unloaded PA-Tn5 transposase

1
1. scibot 20 Jul 2025
  
  in Public
  
  124601
  
  DOI: 10.1101/gr.280305.124
  
  Resource: RRID:Addgene_124601
  
  Curator: @olekpark
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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scibot

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pmc.ncbi.nlm.nih.gov/articles/PMC12212351/
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

IT-scC&T-seq streamlines scalable, parallel profiling of protein–DNA interactions in single cells

1
1. scibot 20 Jul 2025
  
  in Public
  
  Addgene_124
  
  DOI: 10.1186/s13059-025-03661-z
  
  Resource: None
  
  Curator: @olekpark
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601 RRIDCUR:Unresolved RRIDCUR:Incorrect
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RRIDCUR:Incorrect

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scibot

URL

pmc.ncbi.nlm.nih.gov/articles/PMC12235884/
link.springer.com link.springer.com

Antibody-Mediated Protein A-APEX2 Labeling (AMAPEX) for Proximity Proteome Exploration

1
1. scibot 15 Jul 2025
  
  in Public
  
  Catalog No. 124601, Addgene
  
  DOI: 10.1007/978-1-0716-4694-6_19
  
  Resource: RRID:Addgene_124601
  
  Curator: @dhovakimyan1
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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scibot

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link.springer.com/protocol/10.1007/978-1-0716-4694-6_19
May 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Iron‐Dependent JMJD1A‐Mediated Demethylation of H3K9me2 Regulates Gene Expression During Adipogenesis in a Spatial Genome Organization‐Dependent Manner

1
1. scibot 17 May 2025
  
  in Public
  
  124,601
  
  DOI: 10.1111/gtc.70023
  
  Resource: RRID:Addgene_124601
  
  Curator: @olekpark
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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scibot

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pmc.ncbi.nlm.nih.gov/articles/PMC12035669/
Jan 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Single-cell mapping of regulatory DNA:Protein interactions

1
1. scibot 27 Jan 2025
  
  in Public
  
  124601
  
  DOI: 10.1101/2024.12.31.630903
  
  Resource: RRID:Addgene_124601
  
  Curator: @olekpark
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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scibot

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pmc.ncbi.nlm.nih.gov/articles/PMC11722406/
Sep 2024
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Clusters of lineage-specific genes are anchored by ZNF274 in repressive perinucleolar compartments

1
1. scibot 27 Sep 2024
  
  in Public
  
  124601
  
  DOI: 10.1126/sciadv.ado1662
  
  Resource: RRID:Addgene_124601
  
  Curator: @olekpark
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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scibot

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ncbi.nlm.nih.gov/pmc/articles/PMC11397430/
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Spatial 3D genome organization controls the activity of bivalent chromatin during human neurogenesis

1
1. scibot 26 Sep 2024
  
  in Public
  
  124601
  
  DOI: 10.1101/2024.08.01.606248
  
  Resource: RRID:Addgene_124601
  
  Curator: @olekpark
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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scibot

URL

ncbi.nlm.nih.gov/pmc/articles/PMC11312588/
Aug 2024
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

YY1 is involved in homologous recombination inhibition at guanine quadruplex sites in human cells

1
1. scibot 26 Aug 2024
  
  in Public
  
  Addgene_124601
  
  DOI: 10.1093/nar/gkae502
  
  Resource: RRID:Addgene_124601
  
  Curator: @scibot
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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scibot

URL

ncbi.nlm.nih.gov/pmc/articles/PMC11260479/
May 2024
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Atypical heat shock transcription factor HSF5 is critical for male meiotic prophase under non-stress conditions

1
1. scibot 05 May 2024
  
  in Public
  
  plasmid_124601
  
  DOI: 10.1038/s41467-024-47601-0
  
  Resource: RRID:Addgene_124601
  
  Curator: @scibot
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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scibot

URL

ncbi.nlm.nih.gov/pmc/articles/PMC11059408/
Mar 2024
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

A Cluster of Evolutionarily Recent KRAB Zinc Finger Proteins Protects Cancer Cells from Replicative Stress-Induced Inflammation

1
1. scibot 17 Mar 2024
  
  in Public
  
  RRID:Addgene_124601
  
  DOI: 10.1158/0008-5472.CAN-23-1237
  
  Resource: RRID:Addgene_124601
  
  Curator: @scibot
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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scibot

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ncbi.nlm.nih.gov/pmc/articles/PMC10940857/
Jan 2023
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

MOZ and Menin-MLL Complexes are Complementary Regulators of Chromatin Association and Transcriptional Output in Gastrointestinal Stromal Tumor

1
1. scibot 07 Jan 2023
  
  in Public
  
  Addgene_124601
  
  DOI: 10.1158/2159-8290.CD-21-0646
  
  Resource: RRID:Addgene_124601
  
  Curator: @scibot
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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scibot

URL

ncbi.nlm.nih.gov/pmc/articles/PMC9453853/
Nov 2022
www.sciencedirect.com www.sciencedirect.com

Tip60-mediated H2A.Z acetylation promotes neuronal fate specification and bivalent gene activation

1
1. scibot 24 Nov 2022
  
  in Public
  
  RRID:Addgene_124601
  
  DOI: 10.1016/j.molcel.2022.11.002
  
  Resource: RRID:Addgene_124601
  
  Curator: @scibot
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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scibot

URL

sciencedirect.com/science/article/abs/pii/S1097276522010644
Dec 2021
www.sciencedirect.com www.sciencedirect.com

Distal and proximal cis-regulatory elements sense X chromosome dosage and developmental state at the Xist locus

1
1. scibot 21 Dec 2021
  
  in Public
  
  Plasmid_124601
  
  DOI: 10.1016/j.molcel.2021.11.023
  
  Resource: RRID:Addgene_124601
  
  Curator: @scibot
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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scibot

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sciencedirect.com/science/article/pii/S109727652101025X
Oct 2021
www.sciencedirect.com www.sciencedirect.com

Defining Proximity Proteomics of Histone Modifications by Antibody-mediated Protein A-APEX2 Labeling

1
1. scibot 01 Oct 2021
  
  in Public
  
  plasmid_124601
  
  DOI: 10.1016/j.gpb.2021.09.003
  
  Resource: RRID:Addgene_124601
  
  Curator: @scibot
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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RRID:Addgene_124601

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scibot

URL

sciencedirect.com/science/article/pii/S1672022921001820
Aug 2021
www.sciencedirect.com www.sciencedirect.com

Chromatin and transcription factor profiling in rare stem cell populations using CUT&Tag

1
1. scibot 20 Aug 2021
  
  in Public
  
  Addgene_124601
  
  DOI: 10.1016/j.xpro.2021.100751
  
  Resource: RRID:Addgene_124601
  
  Curator: @scibot
  
  SciCrunch record: RRID:Addgene_124601
  
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  RRID:Addgene_124601
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RRID:Addgene_124601

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scibot

URL

sciencedirect.com/science/article/pii/S2666166721004585