61 Matching Annotations
  1. Last 7 days
  2. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    LIG1 Loss in TP53-mutant Triple Negative Breast Cancer Rewires DNA Repair and Confers Sensitivity to PARP-ATR Inhibitor Combinations
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    pmc.ncbi.nlm.nih.gov/articles/PMC13482947/
  3. Jun 2026
  4. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Genome reorganization and its functional impact during breast cancer progression
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    pmc.ncbi.nlm.nih.gov/articles/PMC13271743/
  5. May 2026
  6. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Enhanced IFNy response in dedifferentiated melanoma cells is due to chromatin remodeling as revealed by ATAC-seq
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    pmc.ncbi.nlm.nih.gov/articles/PMC13217986/
  7. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    DNA Methylation Stochasticity is Linked to Transcriptional Variability and Convergent Epigenetic Disruption Across Genetic Subtypes of Acute Myeloid Leukemia
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    pmc.ncbi.nlm.nih.gov/articles/PMC13148364/
  8. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Integrated Single-Cell Whole-Genome Sequencing and Spatial Transcriptomics Reveal Intratumoral Heterogeneity in Ovarian Cancer
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    pmc.ncbi.nlm.nih.gov/articles/PMC13137417/
  9. Apr 2026
  10. www.nature.com www.nature.com
    X-linked cancer-associated polypeptide (XCP) from lncRNA1456 modulates PHF8 histone demethylase activity to regulate the epigenome, gene expression, and cellular pathways in breast cancer
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    nature.com/articles/s41388-026-03740-w
  11. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Dynamic and Ongoing De Novo L1 Retrotransposition Contributes to Genome Plasticity and Intrapatient Heterogeneity in Ovarian Cancer
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    pmc.ncbi.nlm.nih.gov/articles/PMC13055634/
  12. Jan 2026
  13. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    HPV integration in head and neck cancer: downstream splicing events and expression ratios linked with poor outcomes
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    pmc.ncbi.nlm.nih.gov/articles/PMC12790889/
  14. Nov 2025
  15. www.sciencedirect.com www.sciencedirect.com
    Epigenetic profiling reveals key super-enhancer networks driving oncogenesis in HPV-positive HNSCC
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    sciencedirect.com/science/article/pii/S2589004225021728
  16. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Development and Application of MiMouse, a Comprehensive Genomic Profiling Panel for Credentialing Mouse Tumor Models
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    pmc.ncbi.nlm.nih.gov/articles/PMC12569591/
  17. Oct 2025
  18. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    AmpSeqR: an R package for amplicon deep sequencing data analysis
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    pmc.ncbi.nlm.nih.gov/articles/PMC11584457/
  19. Sep 2025
  20. www.sciencedirect.com www.sciencedirect.com
    Machine learning-based identification of a transcriptomic blood signature discriminating between systemic autoimmunity and infection
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    sciencedirect.com/science/article/pii/S2666634025002673
  21. Jul 2025
  22. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Circulating tumor DNA monitoring detects minimal residual disease and predicts outcomes in patients with esophageal adenocarcinoma or squamous cell carcinoma after esophagectomy
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    pmc.ncbi.nlm.nih.gov/articles/PMC12290085/
  23. Jun 2025
  24. www.sciencedirect.com www.sciencedirect.com
    A hexamer tandem repeat RNA embedded within an SVA retrotransposon drives R-loop formation and neurodegeneration
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    sciencedirect.com/science/article/pii/S2211124725005832
  25. www.sciencedirect.com www.sciencedirect.com
    Satb1 directs the differentiation of TH17 cells through suppression of IL-2 expression
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    sciencedirect.com/science/article/pii/S2211124725006370
  26. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    RNA shielding of P65 is required to potentiate oncogenic inflammation in TET2 mutated clonal hematopoiesis
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    pmc.ncbi.nlm.nih.gov/articles/PMC11611684/
  27. May 2025
  28. www.sciencedirect.com www.sciencedirect.com
    The human proteome with direct physical access to DNA
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    sciencedirect.com/science/article/pii/S0092867425005070
  29. www.sciencedirect.com www.sciencedirect.com
    Multimodal analyses reveal genes driving electrophysiological maturation of neurons in the primate prefrontal cortex
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    sciencedirect.com/science/article/pii/S0896627325003083
  30. Dec 2024
  31. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A genome-wide nucleosome-resolution map of promoter-centered interactions in human cells corroborates the enhancer-promoter looping model
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    pmc.ncbi.nlm.nih.gov/articles/PMC11651654/
  32. Oct 2024
  33. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    An in vitro approach reveals molecular mechanisms underlying endocrine disruptor-induced epimutagenesis
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    ncbi.nlm.nih.gov/pmc/articles/PMC11449486/
  34. Jul 2024
  35. www.science.org www.science.org
    The annotation of GBA1 has been concealed by its protein-coding pseudogene GBAP1
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    science.org/doi/10.1126/sciadv.adk1296
  36. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Rapid Dynamics of Signal-Dependent Transcriptional Repression by Capicua
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    ncbi.nlm.nih.gov/pmc/articles/PMC7161736/
  37. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The annotation of GBA1 has been concealed by its protein-coding pseudogene GBAP1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11204300/
  38. Apr 2024
  39. www.sciencedirect.com www.sciencedirect.com
    A senescence restriction point acting on chromatin integrates oncogenic signals
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    sciencedirect.com/science/article/pii/S2211124724003723
  40. Feb 2024
  41. aacrjournals.org aacrjournals.org
    PHF6-altered T-ALL harbor epigenetic repressive switch at bivalent promoters and respond to 5-azacitidine and venetoclax
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    aacrjournals.org/clincancerres/article/30/1/94/732070/PHF6-altered-T-ALL-Harbor-Epigenetic-Repressive
  42. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Parkinson’s Disease Risk Enhancers in Microglia
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    ncbi.nlm.nih.gov/pmc/articles/PMC10845915/
  43. Dec 2023
  44. 52.53.155.43 52.53.155.43
    ccr-23-2159-html.html
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    52.53.155.43/50002159f66eedc909bd4e89525af95101f094c9/ccr-23-2159-html.html
  45. Nov 2023
  46. www.sciencedirect.com www.sciencedirect.com
    Locus-specific proteome decoding reveals Fpt1 as a chromatin-associated negative regulator of RNA polymerase III assembly
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    sciencedirect.com/science/article/pii/S1097276523009085
  47. Aug 2023
  48. 52.53.155.43 52.53.155.43
    AmpSeqR: an R package for amplicon deep sequencing data analysis
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    52.53.155.43/f4ad8e205573ef3fe7246a88a0ec9b2de25b754b/d0899e17-cfa5-450f-9f7b-901b4cd3503e_129581_-_melanie_bahlo-html.html
  49. Jul 2023
  50. www.sciencedirect.com www.sciencedirect.com
    Nucleocytoplasmic mRNA redistribution accompanies RNA binding protein mislocalization in ALS motor neurons and is restored by VCP ATPase inhibition
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    sciencedirect.com/science/article/pii/S0896627323004786
  51. Jun 2023
  52. aacrjournals.org aacrjournals.org
    Comprehensive DNA methylation analysis indicates that pancreatic intraepithelial neoplasia lesions are acinar-derived and epigenetically primed for carcinogenesis
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    aacrjournals.org/cancerres/article/83/11/1905/726442/Comprehensive-DNA-Methylation-Analysis-Indicates
  53. May 2023
  54. www.nature.com www.nature.com
    Local genetic correlations exist among neurodegenerative and neuropsychiatric diseases
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    nature.com/articles/s41531-023-00504-1
  55. Apr 2023
  56. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    DNA methylation landscapes of prostate cancer brain metastasis are shaped by early driver genetic alterations
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    ncbi.nlm.nih.gov/pmc/articles/PMC10102845/
  57. Mar 2023
  58. www.sciencedirect.com www.sciencedirect.com
    In vivo interrogation of regulatory genomes reveals extensive quasi-insufficiency in cancer evolution
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    sciencedirect.com/science/article/pii/S2666979X23000368
  59. Aug 2022
  60. 52.53.155.43 52.53.155.43
    Local genetic correlations exist among neurodegenerative and neuropsychiatric diseases
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    52.53.155.43/362fce05ea7f85123208e7831722388400cae744/2022.05.30.22275781.full-html.html
  61. www.sciencedirect.com www.sciencedirect.com
    Dual ontogeny of disease-associated microglia and disease inflammatory macrophages in aging and neurodegeneration
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    sciencedirect.com/science/article/pii/S1074761322003375
  62. Jul 2022
  63. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Transcriptional and Epigenetic Consequences of DMSO Treatment on HepaRG Cells
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    ncbi.nlm.nih.gov/pmc/articles/PMC9331440/
  64. May 2022
  65. www.biorxiv.org www.biorxiv.org
    An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types
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    biorxiv.org/content/10.1101/2020.02.29.970558v2
  66. Mar 2022
  67. elifesciences.org elifesciences.org
    Novel insights from a multiomics dissection of the Hayflick limit
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    elifesciences.org/articles/70283
  68. Feb 2022
  69. elifesciences.org elifesciences.org
    FMRP regulates mRNAs encoding distinct functions in the cell body and dendrites of CA1 pyramidal neurons
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    elifesciences.org/articles/71892
  70. Nov 2021
  71. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Identification of a novel FUS/ETV4 fusion and comparative analysis with other Ewing sarcoma fusion proteins
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    ncbi.nlm.nih.gov/pmc/articles/PMC8568690/
  72. Oct 2021
  73. www.nature.com www.nature.com
    A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex
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    nature.com/articles/s41586-021-03500-8
  74. www.nature.com www.nature.com
    Morphological diversity of single neurons in molecularly defined cell types
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    nature.com/articles/s41586-021-03941-1
  75. www.sciencedirect.com www.sciencedirect.com
    Spt4 facilitates the movement of RNA polymerase II through the +2 nucleosomal barrier
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    sciencedirect.com/science/article/pii/S2211124721012092
  76. Aug 2021
  77. www.sciencedirect.com www.sciencedirect.com
    Uncoupling of gene expression from copy number presents therapeutic opportunities in aneuploid cancers
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    sciencedirect.com/science/article/pii/S2666379121001981
  78. Jul 2021
  79. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genetic and pharmacological evidence for kinetic competition between alternative poly(A) sites in yeast
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    ncbi.nlm.nih.gov/pmc/articles/PMC8263057/
  80. Jun 2021
  81. www.sciencedirect.com www.sciencedirect.com
    Protocol for using heterologous spike-ins to normalize for technical variation in chromatin immunoprecipitation
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    sciencedirect.com/science/article/pii/S2666166721003166
  82. May 2021
  83. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    ZC3H4 restricts non-coding transcription in human cells
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    ncbi.nlm.nih.gov/pmc/articles/PMC8137146/
  84. Apr 2021
  85. www.cell.com www.cell.com
    IL6/STAT3 Signaling Hijacks Estrogen Receptor α Enhancers to Drive Breast Cancer Metastasis
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    cell.com/cancer-cell/fulltext/S1535-6108(20)30311-1
  86. Feb 2021
  87. www.sciencedirect.com www.sciencedirect.com
    The glucocorticoid receptor recruits the COMPASS complex to regulate inflammatory transcription at macrophage enhancers
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    sciencedirect.com/science/article/pii/S2211124721000553
  88. Sep 2020
  89. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Rapid Dynamics of Signal-Dependent Transcriptional Repression by Capicua
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    ncbi.nlm.nih.gov/pmc/articles/PMC7161736/
  90. Jan 2020
  91. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Dynamic regulation of chromatin accessibility by pluripotency transcription factors across the cell cycle
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    ncbi.nlm.nih.gov/pmc/articles/PMC6890464/
  92. www.sciencedirect.com www.sciencedirect.com
    RAG-Mediated DNA Breaks Attenuate PU.1 Activity in Early B Cells through Activation of a SPIC-BCLAF1 Complex
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    sciencedirect.com/science/article/pii/S2211124719312033
  93. www.sciencedirect.com www.sciencedirect.com
    A Unique Epigenomic Landscape Defines Human Erythropoiesis
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    sciencedirect.com/science/article/pii/S2211124719310538
  94. elifesciences.org elifesciences.org
    FMRP has a cell-type-specific role in CA1 pyramidal neurons to regulate autism-related transcripts and circadian memory
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    elifesciences.org/articles/46919
  95. Nov 2018
  96. www.sciencedirect.com www.sciencedirect.com
    EZH2-Mediated Primary Cilium Deconstruction Drives Metastatic Melanoma Formation
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    sciencedirect.com/science/article/pii/S1535610818302290
  97. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The Dynamic Landscape of Open Chromatin during Human Cortical Neurogenesis
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    pmc.ncbi.nlm.nih.gov/articles/PMC5924568/
  98. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Microbiome Influences Prenatal and Adult Microglia in a Sex-Specific Manner
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    ncbi.nlm.nih.gov/pmc/articles/PMC5786503/
  99. Nov 2017
  100. www.sciencedirect.com www.sciencedirect.com
    TIAM1 Antagonizes TAZ/YAP Both in the Destruction Complex in the Cytoplasm and in the Nucleus to Inhibit Invasion of Intestinal Epithelial Cells
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    sciencedirect.com/science/article/pii/S1535610817301034
  101. www.sciencedirect.com www.sciencedirect.com
    Human AML-iPSCs Reacquire Leukemic Properties after Differentiation and Model Clonal Variation of Disease
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    sciencedirect.com/science/article/pii/S1934590916304544