40 Matching Annotations
  1. Jul 2024
  2. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Rapid Dynamics of Signal-Dependent Transcriptional Repression by Capicua
    2
    1. scibot 13 Jul 2024
      RRID:SCR_000025

      DOI: 10.1016/j.devcel.2020.02.004

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    2. scibot 13 Jul 2024
      RRID:SCR_000025

      DOI: 10.1016/j.devcel.2020.02.004

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    ncbi.nlm.nih.gov/pmc/articles/PMC7161736/
  3. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The annotation of GBA1 has been concealed by its protein-coding pseudogene GBAP1
    1
    1. scibot 02 Jul 2024
      RRID:SCR_000025

      DOI: 10.1126/sciadv.adk1296

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    ncbi.nlm.nih.gov/pmc/articles/PMC11204300/
  4. Apr 2024
  5. www.sciencedirect.com www.sciencedirect.com
    A senescence restriction point acting on chromatin integrates oncogenic signals
    1
    1. scibot 04 Apr 2024
      RRID:SCR_000025

      DOI: 10.1016/j.celrep.2024.114044

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    sciencedirect.com/science/article/pii/S2211124724003723
  6. Feb 2024
  7. aacrjournals.org aacrjournals.org
    PHF6-altered T-ALL harbor epigenetic repressive switch at bivalent promoters and respond to 5-azacitidine and venetoclax
    1
    1. scibot 24 Feb 2024
      RRID:SCR_000025

      DOI: 10.1158/1078-0432.CCR-23-2159

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    aacrjournals.org/clincancerres/article/30/1/94/732070/PHF6-altered-T-ALL-Harbor-Epigenetic-Repressive
  8. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Parkinson’s Disease Risk Enhancers in Microglia
    1
    1. scibot 08 Feb 2024
      RRID:SCR_000025

      DOI: 10.1016/j.isci.2024.108921

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    ncbi.nlm.nih.gov/pmc/articles/PMC10845915/
  9. Dec 2023
  10. 52.53.155.43 52.53.155.43
    ccr-23-2159-html.html
    1
    1. scibot 01 Dec 2023
      RRID:SCR_000025

      DOI: 10.1158/1078-0432.ccr-23-2159

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    52.53.155.43/50002159f66eedc909bd4e89525af95101f094c9/ccr-23-2159-html.html
  11. Nov 2023
  12. www.sciencedirect.com www.sciencedirect.com
    Locus-specific proteome decoding reveals Fpt1 as a chromatin-associated negative regulator of RNA polymerase III assembly
    1
    1. scibot 28 Nov 2023
      RRID:SCR_000025

      DOI: 10.1016/j.molcel.2023.10.037

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    sciencedirect.com/science/article/pii/S1097276523009085
  13. Aug 2023
  14. 52.53.155.43 52.53.155.43
    AmpSeqR: an R package for amplicon deep sequencing data analysis
    1
    1. scibot 12 Aug 2023
      RRID:SCR_000025

      DOI: 10.12688/f1000research.129581.1

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    52.53.155.43/f4ad8e205573ef3fe7246a88a0ec9b2de25b754b/d0899e17-cfa5-450f-9f7b-901b4cd3503e_129581_-_melanie_bahlo-html.html
  15. Jul 2023
  16. www.sciencedirect.com www.sciencedirect.com
    Nucleocytoplasmic mRNA redistribution accompanies RNA binding protein mislocalization in ALS motor neurons and is restored by VCP ATPase inhibition
    1
    1. scibot 22 Jul 2023
      RRID:SCR_000025

      DOI: 10.1016/j.neuron.2023.06.019

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    sciencedirect.com/science/article/pii/S0896627323004786
  17. Jun 2023
  18. aacrjournals.org aacrjournals.org
    Comprehensive DNA methylation analysis indicates that pancreatic intraepithelial neoplasia lesions are acinar-derived and epigenetically primed for carcinogenesis
    1
    1. scibot 03 Jun 2023
      RRID:SCR_000025

      DOI: 10.1158/0008-5472.CAN-22-4052

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    aacrjournals.org/cancerres/article/83/11/1905/726442/Comprehensive-DNA-Methylation-Analysis-Indicates
  19. May 2023
  20. www.nature.com www.nature.com
    Local genetic correlations exist among neurodegenerative and neuropsychiatric diseases
    1
    1. scibot 02 May 2023
      RRID:SCR_000025

      DOI: 10.1038/s41531-023-00504-1

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    nature.com/articles/s41531-023-00504-1
  21. Apr 2023
  22. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    DNA methylation landscapes of prostate cancer brain metastasis are shaped by early driver genetic alterations
    1
    1. scibot 21 Apr 2023
      RRID:SCR_000025

      DOI: 10.1158/0008-5472.CAN-22-2236

      Resource: GenomicRanges (RRID:SCR_000025)

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    ncbi.nlm.nih.gov/pmc/articles/PMC10102845/
  23. Mar 2023
  24. www.sciencedirect.com www.sciencedirect.com
    In vivo interrogation of regulatory genomes reveals extensive quasi-insufficiency in cancer evolution
    1
    1. scibot 11 Mar 2023
      RRID:SCR_000025

      DOI: 10.1016/j.xgen.2023.100276

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    sciencedirect.com/science/article/pii/S2666979X23000368
  25. Aug 2022
  26. 52.53.155.43 52.53.155.43
    Local genetic correlations exist among neurodegenerative and neuropsychiatric diseases
    1
    1. scibot 22 Aug 2022
      RRID:SCR_000025

      DOI: 10.1101/2022.05.30.22275781

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    52.53.155.43/362fce05ea7f85123208e7831722388400cae744/2022.05.30.22275781.full-html.html
  27. www.sciencedirect.com www.sciencedirect.com
    Dual ontogeny of disease-associated microglia and disease inflammatory macrophages in aging and neurodegeneration
    1
    1. scibot 10 Aug 2022
      RRID:SCR_000025

      DOI: 10.1016/j.immuni.2022.07.004

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    sciencedirect.com/science/article/pii/S1074761322003375
  28. Jul 2022
  29. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Transcriptional and Epigenetic Consequences of DMSO Treatment on HepaRG Cells
    1
    1. scibot 30 Jul 2022
      RRID:SCR_000025

      DOI: 10.3390/cells11152298

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    ncbi.nlm.nih.gov/pmc/articles/PMC9331440/
  30. May 2022
  31. www.biorxiv.org www.biorxiv.org
    An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types
    1
    1. scibot 14 May 2022
      RRID:SCR_018096

      DOI: 10.1101/2020.02.29.970558

      Resource: GenomicRanges (RRID:SCR_000025)

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    biorxiv.org/content/10.1101/2020.02.29.970558v2
  32. Mar 2022
  33. elifesciences.org elifesciences.org
    Novel insights from a multiomics dissection of the Hayflick limit
    1
    1. scibot 23 Mar 2022
      RRID:SCR_000025

      DOI: 10.7554/eLife.70283

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    elifesciences.org/articles/70283
  34. Feb 2022
  35. elifesciences.org elifesciences.org
    FMRP regulates mRNAs encoding distinct functions in the cell body and dendrites of CA1 pyramidal neurons
    1
    1. scibot 16 Feb 2022
      RRID:SCR_000025

      DOI: 10.7554/eLife.71892

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    elifesciences.org/articles/71892
  36. Nov 2021
  37. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Identification of a novel FUS/ETV4 fusion and comparative analysis with other Ewing sarcoma fusion proteins
    1
    1. scibot 09 Nov 2021
      RRID:SCR_000025

      DOI: 10.1158/1541-7786.MCR-21-0354

      Resource: GenomicRanges (RRID:SCR_000025)

      Curator: @evieth

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    ncbi.nlm.nih.gov/pmc/articles/PMC8568690/
  38. Oct 2021
  39. www.nature.com www.nature.com
    A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex
    1
    1. scibot 14 Oct 2021
      RRID:SCR_018096

      DOI: 10.1038/s41586-021-03500-8

      Resource: GenomicRanges (RRID:SCR_000025)

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    nature.com/articles/s41586-021-03500-8
  40. www.nature.com www.nature.com
    Morphological diversity of single neurons in molecularly defined cell types
    1
    1. scibot 14 Oct 2021
      RRID:SCR_018096

      DOI: 10.1038/s41586-021-03941-1

      Resource: GenomicRanges (RRID:SCR_000025)

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    nature.com/articles/s41586-021-03941-1
  41. www.sciencedirect.com www.sciencedirect.com
    Spt4 facilitates the movement of RNA polymerase II through the +2 nucleosomal barrier
    1
    1. scibot 01 Oct 2021
      SCR_000025

      DOI: 10.1016/j.celrep.2021.109755

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    sciencedirect.com/science/article/pii/S2211124721012092
  42. Aug 2021
  43. www.sciencedirect.com www.sciencedirect.com
    Uncoupling of gene expression from copy number presents therapeutic opportunities in aneuploid cancers
    1
    1. scibot 04 Aug 2021
      RRID:SCR_000025

      DOI: 10.1016/j.xcrm.2021.100349

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    sciencedirect.com/science/article/pii/S2666379121001981
  44. Jul 2021
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genetic and pharmacological evidence for kinetic competition between alternative poly(A) sites in yeast
    1
    1. scibot 14 Jul 2021
      RRID:SCR_000025

      DOI: 10.7554/eLife.65331

      Resource: GenomicRanges (RRID:SCR_000025)

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    ncbi.nlm.nih.gov/pmc/articles/PMC8263057/
  46. Jun 2021
  47. www.sciencedirect.com www.sciencedirect.com
    Protocol for using heterologous spike-ins to normalize for technical variation in chromatin immunoprecipitation
    1
    1. scibot 17 Jun 2021
      RRID:SCR_000025

      DOI: 10.1016/j.xpro.2021.100609

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    sciencedirect.com/science/article/pii/S2666166721003166
  48. May 2021
  49. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    ZC3H4 restricts non-coding transcription in human cells
    1
    1. scibot 26 May 2021
      SCR_000025

      DOI: 10.7554/eLife.67305

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    ncbi.nlm.nih.gov/pmc/articles/PMC8137146/
  50. Apr 2021
  51. www.cell.com www.cell.com
    IL6/STAT3 Signaling Hijacks Estrogen Receptor α Enhancers to Drive Breast Cancer Metastasis
    1
    1. scibot 20 Apr 2021
      RRID:SCR_018096

      DOI: 10.1016/j.ccell.2020.06.007

      Resource: GenomicRanges (RRID:SCR_000025)

      Curator: @Naa003

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    cell.com/cancer-cell/fulltext/S1535-6108(20)30311-1
  52. Feb 2021
  53. www.sciencedirect.com www.sciencedirect.com
    The glucocorticoid receptor recruits the COMPASS complex to regulate inflammatory transcription at macrophage enhancers
    1
    1. scibot 11 Feb 2021
      RRID:SCR_000025

      DOI: 10.1016/j.celrep.2021.108742

      Resource: GenomicRanges (RRID:SCR_000025)

      Curator: @Naa003

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    sciencedirect.com/science/article/pii/S2211124721000553
  54. Sep 2020
  55. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Rapid Dynamics of Signal-Dependent Transcriptional Repression by Capicua
    1
    1. scibot 03 Sep 2020
      RRID:SCR_000025

      DOI: 10.1016/j.devcel.2020.02.004

      Resource: GenomicRanges (RRID:SCR_000025)

      Curator: @ethanbadger

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    ncbi.nlm.nih.gov/pmc/articles/PMC7161736/
  56. Jan 2020
  57. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Dynamic regulation of chromatin accessibility by pluripotency transcription factors across the cell cycle
    1
    1. scibot 13 Jan 2020
      RRID:SCR_000025

      DOI: 10.7554/eLife.50087

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    ncbi.nlm.nih.gov/pmc/articles/PMC6890464/
  58. www.sciencedirect.com www.sciencedirect.com
    RAG-Mediated DNA Breaks Attenuate PU.1 Activity in Early B Cells through Activation of a SPIC-BCLAF1 Complex
    1
    1. scibot 13 Jan 2020
      RRID:SCR_000025

      DOI: 10.1016/j.celrep.2019.09.026

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      Curator: @ethanbadger

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    sciencedirect.com/science/article/pii/S2211124719312033
  59. www.sciencedirect.com www.sciencedirect.com
    A Unique Epigenomic Landscape Defines Human Erythropoiesis
    1
    1. scibot 13 Jan 2020
      RRID:SCR_000025

      DOI: 10.1016/j.celrep.2019.08.020

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      Curator: @ethanbadger

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    sciencedirect.com/science/article/pii/S2211124719310538
  60. elifesciences.org elifesciences.org
    FMRP has a cell-type-specific role in CA1 pyramidal neurons to regulate autism-related transcripts and circadian memory
    1
    1. scibot 13 Jan 2020
      RRID:SCR_000025

      DOI: 10.7554/eLife.46919

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    elifesciences.org/articles/46919
  61. Nov 2018
  62. www.sciencedirect.com www.sciencedirect.com
    EZH2-Mediated Primary Cilium Deconstruction Drives Metastatic Melanoma Formation
    1
    1. scibot 05 Nov 2018
      GenomicRanges

      Curator: @anp055

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    sciencedirect.com/science/article/pii/S1535610818302290
  63. www.sciencedirect.com www.sciencedirect.com
    The Dynamic Landscape of Open Chromatin during Human Cortical Neurogenesis
    1
    1. scibot 05 Nov 2018
      RRID:SCR_000025

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    sciencedirect.com/science/article/pii/S0092867417314940
  64. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Microbiome Influences Prenatal and Adult Microglia in a Sex-Specific Manner
    1
    1. scibot 05 Nov 2018
      RRID:SCR_000025

      Curator: @evieth

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    ncbi.nlm.nih.gov/pmc/articles/PMC5786503/
  65. Nov 2017
  66. www.sciencedirect.com www.sciencedirect.com
    TIAM1 Antagonizes TAZ/YAP Both in the Destruction Complex in the Cytoplasm and in the Nucleus to Inhibit Invasion of Intestinal Epithelial Cells
    1
    1. scibot 08 Nov 2017
      GenomicRanges

      Curator: @kaitlinsung

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    sciencedirect.com/science/article/pii/S1535610817301034
  67. www.sciencedirect.com www.sciencedirect.com
    Human AML-iPSCs Reacquire Leukemic Properties after Differentiation and Model Clonal Variation of Disease
    1
    1. scibot 08 Nov 2017
      GenomicRanges version 1.18.4

      Curator: @Zeljana_Babic

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    sciencedirect.com/science/article/pii/S1934590916304544