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www.sciencedirect.com:5037 www.sciencedirect.com:5037

Protocol for the preparation, execution, and automated analysis via IntelliR of IntelliCage-based mouse experiments

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1. scibot 16 Dec 2025
  
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  DOI: 10.1016/j.xpro.2025.104246
  
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sciencedirect.com:5037/science/article/pii/S2666166725006525
Jun 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

RNA shielding of P65 is required to potentiate oncogenic inflammation in TET2 mutated clonal hematopoiesis

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1. scibot 11 Jun 2025
  
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  DOI: 10.1158/2159-8290.CD-24-0093
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11611684/
May 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

A comprehensive and standardized pipeline for automated profiling of higher cognition in mice

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1. scibot 17 May 2025
  
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  DOI: 10.1016/j.crmeth.2025.101011
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12049718/
Jan 2025
bpspubs.onlinelibrary.wiley.com bpspubs.onlinelibrary.wiley.com

BPS Publications

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1. scibot 31 Jan 2025
  
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  DOI: 10.1111/bph.17455
  
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bpspubs.onlinelibrary.wiley.com/doi/full/10.1111/bph.17455
Nov 2024
gigabytejournal.com gigabytejournal.com

NeuroVar: an open-source tool for the visualization of gene expression and variation data for biomarkers of neurological diseases

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1. scibot 28 Nov 2024
  
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  RRID:SCR_001626
  
  DOI: 10.46471/gigabyte.143
  
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gigabytejournal.com/articles/143
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Systematic evaluation of multifactorial causal associations for Alzheimer’s disease and an interactive platform MRAD developed based on Mendelian randomization analysis

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1. scibot 07 Nov 2024
  
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  DOI: 10.7554/eLife.96224
  
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ncbi.nlm.nih.gov/pmc/articles/PMC11469671/
Oct 2024
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

An in vitro approach reveals molecular mechanisms underlying endocrine disruptor-induced epimutagenesis

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1. scibot 05 Oct 2024
  
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  DOI: 10.7554/eLife.93975
  
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ncbi.nlm.nih.gov/pmc/articles/PMC11449486/
Jul 2024
www.sciencedirect.com www.sciencedirect.com

The HuMet Repository: Watching human metabolism at work

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1. scibot 25 Jul 2024
  
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  RRID:SCR_0011626
  
  DOI: 10.1016/j.celrep.2024.114416
  
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sciencedirect.com/science/article/pii/S2211124724007459
Jun 2024
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

WALIS dashboard: An online tool to explore a global paleo sea-level database

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1. scibot 08 Jun 2024
  
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  RRID:SCR_001626
  
  DOI: 10.12688/openreseurope.16183.2
  
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ncbi.nlm.nih.gov/pmc/articles/PMC11128055/
Apr 2024
wellcomeopenresearch.org wellcomeopenresearch.org

Born in Bradford’s Age of Wonder cohort: protocol for adolescent data collection

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1. scibot 04 Apr 2024
  
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  RRID:SCR_001626
  
  DOI: 10.12688/wellcomeopenres.20785.1
  
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wellcomeopenresearch.org/articles/9-32/v1
Dec 2023
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

A dataset of small-mammal detections in West Africa and their associated micro-organisms

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1. scibot 13 Dec 2023
  
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  RRID:SCR_001626
  
  DOI: 10.46471/gigabyte.100
  
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ncbi.nlm.nih.gov/pmc/articles/PMC10711198/
Oct 2023
www.cell.com www.cell.com

Tonic activin signaling shapes cellular and synaptic properties of CA1 neurons mainly in dorsal hippocampus

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1. scibot 07 Oct 2023
  
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  RRID:SCR_001626
  
  DOI: 10.1016/j.isci.2023.108001
  
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cell.com/iscience/abstract/S2589-0042(23)02078-3
Aug 2023
www.sciencedirect.com www.sciencedirect.com

Sex shapes cell-type-specific transcriptional signatures of stress exposure in the mouse hypothalamus

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1. scibot 03 Aug 2023
  
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  SCR_001626
  
  DOI: 10.1016/j.celrep.2023.112874
  
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sciencedirect.com/science/article/pii/S2211124723008859
Jul 2023
www.sciencedirect.com www.sciencedirect.com

Global and tissue-specific aging effects on murine proteomes

1
1. scibot 06 Jul 2023
  
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  RRID:SCR_001626
  
  DOI: 10.1016/j.celrep.2023.112715
  
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sciencedirect.com/science/article/pii/S221112472300726X
52.53.155.43 52.53.155.43

epi-22-1319-html.html

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1. scibot 01 Jul 2023
  
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  RRID:SCR_001626
  
  DOI: 10.1158/1055-9965.EPI-22-1319
  
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52.53.155.43/02fb628a182fd0cc09fb3340da1ab473695c697e/epi-22-1319-html.html
May 2023
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Systematic online living evidence summaries: emerging tools to accelerate evidence synthesis

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1. scibot 30 May 2023
  
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  RRID:SCR_001626
  
  DOI: 10.1042/CS20220494
  
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ncbi.nlm.nih.gov/pmc/articles/PMC10220429/
Mar 2023
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

HTGQC and shinyHTGQC: an R package and shinyR application for quality controls of HTG EDGE-seq protocols

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1. scibot 22 Mar 2023
  
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  RRID:SCR_001626
  
  DOI: 10.46471/gigabyte.74
  
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ncbi.nlm.nih.gov/pmc/articles/PMC10027062/
Dec 2022
www.cell.com www.cell.com

Local light signaling at the leaf tip drives remote differential petiole growth through auxin-gibberellin dynamics

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1. scibot 20 Dec 2022
  
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  RRID:SCR_001626
  
  DOI: 10.1016/j.cub.2022.11.045
  
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cell.com/current-biology/fulltext/S0960-9822(22)01835-8
Sep 2022
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Biological misinterpretation of transcriptional signatures in tumor samples can unknowingly undermine mechanistic understanding and faithful alignment with preclinical data

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1. scibot 28 Sep 2022
  
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  RRID:SCR_001626
  
  DOI: 10.1158/1078-0432.CCR-22-1102
  
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ncbi.nlm.nih.gov/pmc/articles/PMC9475248/
May 2022
f1000research.com f1000research.com

F1000Research Article: The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms.

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1. scibot 21 May 2022
  
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  RRID:SCR_001626
  
  DOI: 10.12688/f1000research.110194.1
  
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f1000research.com/articles/11-530
Apr 2022
link.springer.com link.springer.com

classifieR a flexible interactive cloud-application for functional annotation of cancer transcriptomes

1
1. scibot 02 Apr 2022
  
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  RRID:SCR_001626
  
  DOI: 10.1186/s12859-022-04641-x
  
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link.springer.com/article/10.1186/s12859-022-04641-x
Jun 2021
elifesciences.org elifesciences.org

Quantitative mapping of human hair greying and reversal in relation to life stress

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1. scibot 26 Jun 2021
  
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  RRID:SCR_001626
  
  DOI: 10.7554/eLife.67437
  
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elifesciences.org/articles/67437
Feb 2021
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

ShinyLearner: A containerized benchmarking tool for machine-learning classification of tabular data

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1. scibot 24 Feb 2021
  
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  RRID:CR_001626
  
  DOI: 10.1093/gigascience/giaa026
  
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ncbi.nlm.nih.gov/pmc/articles/PMC7131989/
Nov 2020
portlandpress.com portlandpress.com

fiddle: a tool to combat publication bias by getting research out of the file drawer and into the scientific community

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1. scibot 04 Nov 2020
  
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  RRID:SCR_001626
  
  DOI: 10.1042/CS20201125
  
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  RRID:SCR_001626 RRIDCUR:Validated
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portlandpress.com/clinsci/article/134/20/2729/226790/fiddle-a-tool-to-combat-publication-bias-by
Sep 2020
elifesciences.org elifesciences.org

CNApp, a tool for the quantification of copy number alterations and integrative analysis revealing clinical implications

1
1. scibot 26 Sep 2020
  
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  RRID:SCR_001626
  
  DOI: 10.7554/eLife.50267
  
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elifesciences.org/articles/50267
academic.oup.com academic.oup.com

EHRtemporalVariability: delineating temporal data-set shifts in electronic health records

1
1. scibot 03 Sep 2020
  
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  RRID:SCR_001626
  
  DOI: 10.1093/gigascience/giaa079
  
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  Curator: @Naa003
  
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academic.oup.com/gigascience/article/9/8/giaa079/5878826
Jan 2020
www.sciencedirect.com www.sciencedirect.com

Single-Cell Profiling Reveals Sex, Lineage, and Regional Diversity in the Mouse Kidney

1
1. scibot 13 Jan 2020
  
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  RRID:SCR_001626
  
  DOI: 10.1016/j.devcel.2019.10.005
  
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  Curator: @ethanbadger
  
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sciencedirect.com/science/article/pii/S1534580719308147
Nov 2018
europepmc.org europepmc.org

Untitled document

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1. scibot 05 Nov 2018
  
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  Curator: @evieth
  
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europepmc.org/articles/PMC5691353/