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Registration and Reporting of Clinical Trials Affiliated with California Universities and with Primary Completion Date from 2014 to 2017

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1. scibot 13 Apr 2025
  
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  RRID:SCR_001905
  
  DOI: 10.1101/2025.04.07.25325421
  
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medrxiv.org/content/10.1101/2025.04.07.25325421v1
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Oral microbiome brain axis and cognitive performance in older adults

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1. scibot 10 Apr 2025
  
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  DOI: 10.1038/s44400-025-00004-4
  
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  DOI: 10.1038/s44400-025-00004-4
  
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  RRID:SCR_001905 DOI:10.1038/s44400-025-00004-4
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nature.com/articles/s44400-025-00004-4
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dgaf218-html.html

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1. scibot 10 Apr 2025
  
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  DOI: 10.1210/clinem/dgaf218
  
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52.53.155.43/d23a7751aa9e897eaffacb3e0eedbc5a2d592863/dgaf218-html.html
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snRNA-seq analysis of the moss Physcomitrium patens reveals a conserved cytokinin-ESR module promoting pluripotent stem cell identity

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1. scibot 10 Apr 2025
  
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  DOI: 10.1101/2024.07.31.606100
  
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52.53.155.43/ebea56b5c57b47d3ed306774161acf71df19a431/2024.07.31.606100.full-html.html
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Auxin and tryptophan trigger common responses in the streptophyte alga Penium margaritaceum

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1. scibot 10 Apr 2025
  
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  DOI: 10.1016/j.cub.2025.03.037
  
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sciencedirect.com/science/article/pii/S0960982225003537
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1-s2.0-S2589004225006509-main-html.html

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1. scibot 09 Apr 2025
  
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  RRID:SCR_001905
  
  DOI: 10.17632/847bvc7g38.1
  
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52.53.155.43/d006153d445a1fe4215c8255296d34eee552f107/1-s2.0-S2589004225006509-main-html.html
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Intestinal secretory differentiation reflects niche-driven phenotypic and epigenetic plasticity of a common signal-responsive terminal cell

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1. scibot 09 Apr 2025
  
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  DOI: 10.1016/j.stem.2025.03.005
  
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sciencedirect.com/science/article/pii/S1934590925000955
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Transcriptional conservation and evolutionary divergence of cell types across mammalian hypothalamus development

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1. scibot 09 Apr 2025
  
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  DOI: 10.1016/j.devcel.2025.03.009
  
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sciencedirect.com/science/article/pii/S153458072500156X
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CXXC-finger protein 1 associates with FOXP3 to stabilize homeostasis and suppressive functions of regulatory T cells

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1. scibot 08 Apr 2025
  
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  RRID:SCR_001905
  
  DOI: 10.7554/eLife.103417
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11970909/
Apr 2025
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Intact sensorimotor rhythm abilities but altered audiovisual integration in cochlear implant users

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1. scibot 05 Apr 2025
  
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  DOI: 10.1371/journal.pone.0320815
  
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journals.plos.org/plosone/article
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1. scibot 05 Apr 2025
  
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  DOI: 10.1158/1535-7163.mct-24-0957
  
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2. scibot 04 Apr 2025
  
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  RRID:SCR_001905
  
  DOI: 10.1158/1535-7163.mct-24-0957
  
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52.53.155.43/faf96f8cc9641dd5f96a635325c9392694fd369a/PDF-html.html
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Follow-up Analysis Enhances Understanding of Molecular Residual Disease in Localized Non–Small Cell Lung Cancer

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1. scibot 05 Apr 2025
  
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  RRID:SCR_001905
  
  DOI: 10.1158/1078-0432.CCR-24-2909
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11959268/
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Neighborhood disadvantage and prostate tumor aggressiveness among African American and European American men

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1. scibot 04 Apr 2025
  
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  RRID:SCR_001905
  
  DOI: 10.1158/1055-9965.EPI-24-0450
  
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  RRID:SCR_001905
  
  DOI: 10.1158/1055-9965.EPI-24-0450
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11614192/
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Non-invasive multi-cancer detection using DNA hypomethylation of LINE-1 retrotransposons

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1. scibot 04 Apr 2025
  
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  RRID:SCR_001905
  
  DOI: 10.1158/1078-0432.CCR-24-2669
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11959274/
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BPS Publications

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1. scibot 03 Apr 2025
  
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  RRID:SCR_001905
  
  DOI: 10.1111/bph.70023
  
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bpspubs.onlinelibrary.wiley.com/doi/full/10.1111/bph.70023
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Does hybridisation with an invasive species threaten Europe’s most endangered reptile? Genomic assessment of Aeolian lizards on Vulcano Island

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1. scibot 03 Apr 2025
  
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  https://www.r-project.org/
  
  DOI: 10.1016/j.isci.2024.111097
  
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sciencedirect.com/science/article/pii/S2589004224023228
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Deciphering shared molecular dysregulation across Parkinson’s disease variants using a multi-modal network-based data integration and analysis

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1. scibot 03 Apr 2025
  
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  RRID:SCR_001905
  
  DOI: 10.1038/s41531-025-00914-3
  
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link.springer.com/article/10.1038/s41531-025-00914-3
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Decoding m6Am by simultaneous transcription-start mapping and methylation quantification

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1. scibot 02 Apr 2025
  
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  RRID:SCR_001905
  
  DOI: 10.7554/eLife.104139
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11957539/
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A Checkpoint Reversal Receptor Mediates Bipartite Activation and Enhances CAR T-cell Function

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1. scibot 02 Apr 2025
  
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  RRID:SCR_001905
  
  DOI: 10.1158/2767-9764.CRC-24-0125
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11955954/
52.53.155.43 52.53.155.43

PDF-html.html

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  RRID:SCR_001905
  
  DOI: 10.1158/1940-6207.capr-24-0501
  
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52.53.155.43/41c6f0bc074edb957baad5c1f88ef6cd28e897ce/PDF-html.html
52.53.155.43 52.53.155.43

PDF-html.html

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1. scibot 02 Apr 2025
  
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  DOI: 10.1158/1078-0432.ccr-24-1763
  
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52.53.155.43/173c4c54b736436d428839184cf2f4be9c034a93/PDF-html.html
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Non-invasive liver fibrosis markers are increased in obese individuals with non-alcoholic fatty liver disease and the metabolic syndrome

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1. scibot 02 Apr 2025
  
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  RRID:SCR_001905
  
  DOI: 10.1038/s41598-025-85508-y
  
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  RRID:SCR_001905
  
  DOI: 10.1038/s41598-025-85508-y
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11950363/
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1-s2.0-S2666364325000451-main-html.html

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1. scibot 02 Apr 2025
  
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  DOI: 10.1016/j.jtocrr.2025.100829
  
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52.53.155.43/b382ed65c72a7aba75d6b2870d6471fd7cf1eb7f/1-s2.0-S2666364325000451-main-html.html
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The role of stereotactic body radiation therapy in the outcomes of intrahepatic recurrent small hepatocellular carcinoma

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1. scibot 01 Apr 2025
  
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  DOI: 10.1016/j.jceh.2025.102561
  
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sciencedirect.com/science/article/pii/S0973688325000611
Mar 2025
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Assembly of stool-derived bacterial communities follows “early-bird” resource utilization dynamics

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1. scibot 29 Mar 2025
  
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  RRID: SCR_001905
  
  DOI: 10.1016/j.cels.2025.101240
  
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sciencedirect.com/science/article/pii/S2405471225000730
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Seeded aggregation of TDP-43 induces its loss of function and reveals early pathological signatures

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1. scibot 29 Mar 2025
  
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  DOI: 10.1016/j.neuron.2025.03.008
  
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sciencedirect.com/science/article/pii/S0896627325001801
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Metallophilic marginal zone macrophages cross-prime CD8+ T cell-mediated protective immunity against blood-borne tumors

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1. scibot 29 Mar 2025
  
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  DOI: 10.1016/j.immuni.2025.02.027
  
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sciencedirect.com/science/article/pii/S1074761325000949
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Single-cell transcriptomic and functional studies identify glial state changes and a role for inflammatory RIPK1 signaling in ALS pathogenesis

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1. scibot 29 Mar 2025
  
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  DOI: 10.1016/j.immuni.2025.02.024
  
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sciencedirect.com/science/article/pii/S1074761325000913
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Lineage contribution of the mesendoderm progenitors in the gastrulating mouse embryo

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1. scibot 29 Mar 2025
  
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  DOI: 10.1016/j.devcel.2025.02.015
  
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sciencedirect.com/science/article/pii/S1534580725001200
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Segregated basal ganglia output pathways correspond to genetically divergent neuronal subclasses

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1. scibot 29 Mar 2025
  
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  RRID:SCR_001905
  
  DOI: 10.1016/j.celrep.2025.115454
  
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sciencedirect.com/science/article/pii/S2211124725002256
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Assessing the stability of indoor farming systems using data outlier detection

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1. scibot 28 Mar 2025
  
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  DOI: 10.3389/fpls.2024.1270544
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11938842/
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Evaluation of the hypercholesterolemia care cascade and compliance with NCEP-ATP III guidelines in Iran based on the WHO STEPS survey

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1. scibot 26 Mar 2025
  
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  DOI: 10.1186/s12944-025-02506-9
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11921609/
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The carnosinase dipeptidase CNDP1 is a novel metabolic vulnerability in brain metastasis

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1. scibot 24 Mar 2025
  
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  DOI: 10.1101/2025.03.18.644053
  
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  DOI: 10.1101/2025.03.18.644053
  
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Homeodomain protein PRRX1 anchors the Ku heterodimers at DNA double-strand breaks to promote nonhomologous end-joining

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The nuclear pore complex connects energy sensing to transcriptional plasticity in longevity

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Safety and Efficacy of Copanlisib in Combination with Nivolumab: A Phase Ib Study in Patients with Advanced Solid Tumors

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m6A deficiency impairs hypothalamic neurogenesis of feeding-related neurons in mice and human organoids and leads to adult obesity in mice

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Sequential transitions of male sexual behaviors driven by dual acetylcholine-dopamine dynamics

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Dietary timing enhances exercise by modulating fat-muscle crosstalk via adipocyte AMPKα2 signaling

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Long-term CSF responses in adult patients with spinal muscular atrophy type 2 or 3 on treatment with nusinersen

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Impact of Co-mutations and Transcriptional Signatures in Non–Small Cell Lung Cancer Patients Treated with Adagrasib in the KRYSTAL-1 Trial

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Oscillatory control over representational geometry of sequence working memory in macaque frontal cortex

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Effective targeting of PDGFRA-altered high-grade glioma with avapritinib

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Identification of early genes in the pathophysiology of fibrotic interstitial lung disease in a new model of pulmonary fibrosis

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Modular Arrangement of Synaptic and Intrinsic Homeostatic Plasticity within Visual Cortical Circuits

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Age of tobacco smoking initiation among Iranian adults based on National and Subnational data from the 2021 STEPS survey

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LTA4H improves the tumor microenvironment and prevents HCC progression via targeting the HNRNPA1/LTBP1/TGF-β axis

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Impaired yolk sac NAD metabolism disrupts murine embryogenesis with relevance to human birth defects

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Beyond self-reports: serum cotinine reveals sex-and age-related differences of smoking on all-cause and disease-specific mortality

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A modified decontamination and storage method for sputum from patients with tuberculosis

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Acetalax and Bisacodyl for the Treatment of Triple-Negative Breast Cancer: A Combined Molecular and Preclinical Study

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PIEZO1-dependent mode switch of neuronal migration in heterogeneous microenvironments in the developing brain

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Short-term social isolation acts on hypothalamic neurons to promote social behavior in a sex- and context-dependent manner

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Molecular and spatial transcriptomic classification of midbrain dopamine neurons and their alterations in a LRRK2G2019S model of Parkinson’s disease

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Islet single-cell transcriptomic profiling during obesity-induced beta cell expansion in female mice

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snRNA-seq analysis of the moss Physcomitrium patens identifies a conserved cytokinin-ESR module promoting pluripotent stem cell identity

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Evaluating the Radiation Sensitivity Index and 12-Chemokine Gene Expression Signature for Clinical Use in a CLIA Laboratory

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Surgery-induced reduction in inflammation relates to improved neural inhibitory control in obesity

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Nivolumab combined with induction chemotherapy and radiotherapy in nasopharyngeal carcinoma: A multicenter phase 2 PLATINUM trial

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Geospatial evaluation of San Francisco, California’s homeless encampment sweeps injunction

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PARP Inhibitors Differentially Regulate Immune Responses in Distinct Genetic Backgrounds of High-Grade Serous Tubo-Ovarian Carcinoma

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Fusion oncoproteins and cooperating mutations define disease phenotypes in NUP98-rearranged leukemia

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Pcf11/Spt5 condensates stall RNA polymerase II to facilitate termination and piRNA-guided heterochromatin formation

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Clinicopathological predictors of the presence of blood circulating tumor DNA in early-stage non-small cell lung cancers

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Hepatic sphingomyelin phosphodiesterase 3 promotes steatohepatitis by disrupting membrane sphingolipid metabolism

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The Complexly Parcellated, Yet Quantitatively Reduced, Orexinergic/Hypocretinergic System of Humans

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Co-evolution of atypical BRAF and KRAS mutations in colorectal tumorigenesis

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Distinctive physiology of molecularly identified medium spiny neurons in the macaque putamen

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Multiomic QTL mapping reveals phenotypic complexity of GWAS loci and prioritizes putative causal variants

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Systems immunology analysis of human immune organoids identifies host-specific correlates of protection to different influenza vaccines

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The impact of air pollution on sperm DNA methylation

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Dietary availability acutely influences puberty onset via a hypothalamic neural circuit

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KAT6B overexpression in mice causes aggression, anxiety, and epilepsy

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Cardiac structure and function 1.5 years after COVID-19: results from the EPILOC study

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Methionine intervention induces PD-L1 expression to enhance the immune checkpoint therapy response in MTAP-deleted osteosarcoma

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The effect of fasting on human memory consolidation

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Rho/Rok-dependent regulation of actomyosin contractility at tricellular junctions restricts epithelial permeability in Drosophila

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Sweetener aspartame aggravates atherosclerosis through insulin-triggered inflammation

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Atypical hippocampal excitatory neurons express and govern object memory

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Risk Factors for Early Onset Sporadic Colorectal Cancer in Male Veterans

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Serotonin receptor HTR2B facilitates colorectal cancer metastasis via CREB1-ZEB1 axis mediated epithelial-mesenchymal transition

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YAP1 suppression by ZDHHC7 is associated with ferroptosis resistance and poor prognosis in ovarian clear cell carcinoma

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Predictive and dynamic signature for anti-angiogenics in combination with PD-1 inhibitor in soft-tissue sarcoma: correlative studies linked to the IMMUNOSARC trial

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Multiomics Profiling Distinguishes Sebaceous Carcinoma from Benign Sebaceous Neoplasms and Provides Insight into the Genetic Evolution of Sebaceous Carcinogenesis

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Hepatocellular Carcinoma Immune Microenvironment Analysis: A Comprehensive Assessment with Computational and Classical Pathology

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Intraperitoneal Nivolumab After Debulking Surgery and Hyperthermic Intraperitoneal Chemotherapy in Advanced Ovarian Cancer: A Phase I Study with Expansion Cohort

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The innate immune landscape of dMMR/MSI cancers predicts outcome of nivolumab treatment: results from the Drug Rediscovery Protocol

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The Tumour Immune Microenvironment Drives Survival Outcomes and Therapeutic Response in an Integrated Molecular Analysis of Gastric Adenocarcinoma

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Radiodensities of skeletal muscle and visceral adipose tissues are prognostic factors in clear cell renal cell carcinoma

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Arginine methylation of DDX3 by PRMT1 mediates mitochondrial homeostasis to promote breast cancer metastasis

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The DNA methyltransferase inhibitor 5-aza-4’-thio-2’-deoxycytidine induces C>G transversions and acute lymphoid leukemia development

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Basal T cell activation predicts yellow fever vaccine response independently of cytomegalovirus infection and sex-related immune variations

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Individualized patient tumor organoids faithfully preserve human brain tumor ecosystems and predict patient response to therapy

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Oncofetal reprogramming drives phenotypic plasticity in WNT-dependent colorectal cancer

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Single-molecule m6A detection empowered by endogenous labeling unveils complexities across RNA isoforms

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Advancing the Indian cattle pangenome: characterizing non-reference sequences in Bos indicus

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Single-cell sequencing provides clues about the developmental genetic basis of evolutionary adaptations in syngnathid fishes

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Linking citation and retraction data reveals the demographics of scientific retractions among highly cited authors

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Microglial plasticity governed by state-specific enhancer landscapes

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Alcohol induces long-lasting sleep deficits in Drosophila via subsets of cholinergic neurons

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Brainstem neuropeptidergic neurons link a neurohumoral axis to satiation

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  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 231, in init self.links = row['document']['link'] TypeError: string indices must be integers
  
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Decoding sound content in the early visual cortex of aphantasic participants

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Deterministic genetic barcoding for multiplexed behavioral and single-cell transcriptomic studies

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A developmental atlas of mouse vestibular-like inner ear organoids

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FEBS Press

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Tofacitinib and budesonide treatment affect stemness and chemokine release in IBD patient-derived colonoids

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A Cost-Effective Two-Step Approach for Multi-Cancer Early Detection in High-Risk Populations

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A chromosome-scale genome assembly of the pioneer plant Stylosanthes angustifolia: insights into genome evolution and drought adaptation

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Prevalence, comorbidities, and disease-related complications of rheumatoid arthritis in Colombia: a national cross-sectional study based on administrative claims data

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Cytoplasmic mRNA decay controlling inflammatory gene expression is determined by pre-mRNA fate decision

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Spatial transcriptomic analysis identifies epithelium-macrophage crosstalk in endometriotic lesions

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Progenitor effect in the spleen drives early recovery via universal hematopoietic cell inflation

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Natural killer cell–mediated cytotoxicity shapes the clonal evolution of B cell leukaemia

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Cancer Prevalence across Vertebrates

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Therapeutic Targeting and Structural Characterization of a Sotorasib-Modified KRAS G12C–MHC I Complex Demonstrate the Antitumor Efficacy of Hapten-Based Strategies

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Spatial and Single-Cell Analyses Reveal Heterogeneity of DNAM-1 Receptor–Ligand Interactions That Instructs Intratumoral γδT-cell Activity

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Ancestry-specific gene expression in peripheral monocytes mediates risk of neurodegenerative disease

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The development of social attention in orangutans: Comparing peering behavior in wild and zoo-housed individuals

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Influence of interoception and body movement on the rubber hand illusion

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Activation of ionotropic and group I metabotropic glutamate receptors stimulates kisspeptin neuron activity in mice

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Effects of gene dosage on cognitive ability: A function-based association study across brain and non-brain processes

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KDM6B-dependent epigenetic programming of uterine fibroblasts in early pregnancy regulates parturition timing in mice

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Integration of 168,000 samples reveals global patterns of the human gut microbiome

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Assessing the Risks of Potential Pathogens and Antibiotic Resistance Genes Among Heterogeneous Habitats in a Temperate Estuary Wetland: a Meta-analysis

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Functional Regrowth of Norepinephrine Axons in the Adult Mouse Brain Following Injury

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The Tumor Immune Microenvironment and Therapeutic Efficacy of Trastuzumab Deruxtecan in Gastric Cancer

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A practical distribution pattern of α-SMA-positive carcinoma associated fibroblasts indicates poor prognosis of patients with pancreatic ductal adenocarcinoma

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Proteomic patterns associated with ketamine response in major depressive disorders

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Beyond HRD Status: Unraveling Genetic Variants Impacting PARP Inhibitor Sensitivity in Advanced Ovarian Cancer

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Cell therapy with human IL-10-producing ILC2s limits xenogeneic graft-versus-host disease by inhibiting pathogenic T cell responses

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A genome-wide nucleosome-resolution map of promoter-centered interactions in human cells corroborates the enhancer-promoter looping model

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Changes in Skin Cancer-Related Behaviors, Distress, and Beliefs in Response to Receipt of Low- to Moderate-Penetrance Genetic Test Results for Skin Cancer Risk

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Cerebellar transcranial AC stimulation produces a frequency-dependent bimodal cerebellar output pattern

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Personalized Medicine in Acromegaly: The ACROFAST Study

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Early‐life IL‐4 administration induces long‐term changes in microglia in the cerebellum and prefrontal cortex

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The longitudinal behavioral effects of acute exposure to galactic cosmic radiation in female C57BL/6J mice: Implications for deep space missions, female crews, and potential antioxidant countermeasures

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Light‐exercise‐induced dopaminergic and noradrenergic stimulation in the dorsal hippocampus: Using a rat physiological exercise model

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Development of two machine learning models to predict conversion from primary HER2-0 breast cancer to HER2-low metastases: a proof-of-concept study

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The Resting‐State Activities of the Angular Gyrus and the Micturition Desire‐Awakening Function in Children With and Without Enuresis

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Control of 3′ splice site selection by the yeast splicing factor Fyv6

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crc-24-0302-html.html

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mct-24-0664-html.html

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can-24-2450-html.html

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1-s2.0-S2589004224027834-main-html.html

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Hormone-responsive progenitors have a unique identity and exhibit high motility during mammary morphogenesis

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Burden of Antimicrobial Resistance in Adult Hospitalized Patients With Cancer: A Multicenter Analysis

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