69 Matching Annotations
  1. Last 7 days
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    Cross-modal contrastive learning decodes developmental regulatory features through chromatin potential analysis
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    pmc.ncbi.nlm.nih.gov/articles/PMC12532322/
  3. Jul 2025
  4. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Neuro-mesenchymal interaction mediated by a β2 adrenergic-nerve growth factor feedforward loop promotes colorectal cancer progression
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    pmc.ncbi.nlm.nih.gov/articles/PMC11729495/
  5. Jun 2025
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    Satb1 directs the differentiation of TH17 cells through suppression of IL-2 expression
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    sciencedirect.com/science/article/pii/S2211124725006370
  7. May 2025
  8. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    RAG suppresses group 2 innate lymphoid cells
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    pmc.ncbi.nlm.nih.gov/articles/PMC12055012/
  9. Apr 2025
  10. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Ontogeny Dictates Oncogenic Potential, Lineage Hierarchy, and Therapy Response in Pediatric Leukemia
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    pmc.ncbi.nlm.nih.gov/articles/PMC11957141/
  11. Feb 2025
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    Multiomic QTL mapping reveals phenotypic complexity of GWAS loci and prioritizes putative causal variants
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    sciencedirect.com/science/article/pii/S2666979X2500031X
  13. Dec 2024
  14. biosignaling.biomedcentral.com biosignaling.biomedcentral.com
    CD69+CD103+CD8+ tissue-resident memory T cells possess stronger anti-tumor activity and predict better prognosis in colorectal cancer
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    biosignaling.biomedcentral.com/articles/10.1186/s12964-024-01990-3
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    Reciprocal inhibition of NOTCH and SOX2 shapes tumor cell plasticity and therapeutic escape in triple-negative breast cancer
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    pmc.ncbi.nlm.nih.gov/articles/PMC11628624/
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    The L27 domain of MPP7 enhances TAZ-YY1 cooperation to renew muscle stem cells
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    pmc.ncbi.nlm.nih.gov/articles/PMC11624273/
  17. Jul 2024
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    MYB-related transcription factors control chloroplast biogenesis
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    sciencedirect.com/science/article/pii/S009286742400713X
  19. Jun 2024
  20. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The clock gene BHLHE40 and atypical CCNG2 control androgen-induced cellular senescence as a novel tumor suppressive pathway in prostate cancer
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    ncbi.nlm.nih.gov/pmc/articles/PMC11188219/
  21. Feb 2024
  22. 52.53.155.43 52.53.155.43
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    A Mutation-driven oncofetal regression fuels phenotypic plasticity in colorectal cancer
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    biorxiv.org/content/10.1101/2023.12.10.570854v1
  24. Jan 2024
  25. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PRDM3/16 Regulate Chromatin Accessibility Required for NKX2-1 Mediated Alveolar Epithelial Differentiation and Function
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    ncbi.nlm.nih.gov/pmc/articles/PMC10769259/
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    Genetic insights into carbohydrate sulfotransferase 8 and its impact on the immunotherapy efficacy of cancer
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    sciencedirect.com/science/article/pii/S2211124723016522
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    Leveraging tissue-specific enhancer-target gene regulatory networks identifies enhancer somatic mutations that functionally impact lung cancer
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    ncbi.nlm.nih.gov/pmc/articles/PMC10758689/
  28. Dec 2023
  29. www.science.org www.science.org
    A single-cell multi-omic atlas spanning the adult rhesus macaque brain
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    science.org/doi/10.1126/sciadv.adh1914
  30. 52.53.155.43 52.53.155.43
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  31. Oct 2023
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    Three-dimensional genome architecture coordinates key regulators of lineage specification in mammary epithelial cells
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    sciencedirect.com/science/article/pii/S2666979X23002501
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    A single-cell multi-omic atlas spanning the adult rhesus macaque brain
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    ncbi.nlm.nih.gov/pmc/articles/PMC10569716/
  34. Feb 2023
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    Gestational palmitic acid suppresses embryonic GATA-binding protein 4 signaling and causes congenital heart disease
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    sciencedirect.com/science/article/pii/S2666379123000459
  36. Dec 2022
  37. aacrjournals.org aacrjournals.org
    TFAP4 activates IGF2BP1 and promotes progression of non-small cell lung cancer by stabilizing TK1 expression through m6A modification
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    aacrjournals.org/mcr/article/20/12/1763/711001/TFAP4-Activates-IGF2BP1-and-Promotes-Progression
  38. Sep 2022
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    A natural transdifferentiation event involving mitosis is empowered by integrating signaling inputs with conserved plasticity factors
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    sciencedirect.com/science/article/pii/S2211124722011974
  40. Aug 2022
  41. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Identification of CXCL10 and CXCL11 as the candidate genes involving the development of colitis-associated colorectal cancer
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    ncbi.nlm.nih.gov/pmc/articles/PMC9393335/
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    The sage genome provides insight into the evolutionary dynamics of diterpene biosynthesis gene cluster in plants
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  43. Feb 2022
  44. www.sciencedirect.com www.sciencedirect.com
    EBF1 nuclear repositioning instructs chromatin refolding to promote therapy resistance in T leukemic cells
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  45. Jan 2022
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    bpspubs.onlinelibrary.wiley.com/doi/10.1111/bph.15744
  47. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Enhancer RNA Expression in Response to Glucocorticoid Treatment in Murine Macrophages
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    ncbi.nlm.nih.gov/pmc/articles/PMC8744892/
  48. Oct 2021
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  50. Aug 2021
  51. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Axenfeld-Rieger syndrome-associated mutants of the transcription factor FOXC1 abnormally regulate NKX2-5 in model zebrafish embryos
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    ncbi.nlm.nih.gov/pmc/articles/PMC7450120/
  52. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Effects of intron conversion in the human CYP11B2 gene on its transcription and blood pressure regulation in transgenic mice
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    ncbi.nlm.nih.gov/pmc/articles/PMC7415971/
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    ncbi.nlm.nih.gov/pmc/articles/PMC6408623/
  54. elifesciences.org elifesciences.org
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    elifesciences.org/articles/21883
  55. Jul 2021
  56. link.springer.com link.springer.com
    RASAL1 induces to downregulate the SCD1, leading to suppression of cell proliferation in colon cancer via LXRα/SREBP1c pathway
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    link.springer.com/article/10.1186/s40659-019-0268-x
  57. www.nature.com www.nature.com
    Severe head dysgenesis resulting from imbalance between anterior and posterior ontogenetic programs
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    nature.com/articles/s41419-019-2040-0
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    Identification of novel cerebellar developmental transcriptional regulators with motif activity analysis
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    link.springer.com/article/10.1186/s12864-019-6063-9
  59. www.sciencedirect.com www.sciencedirect.com
    Enhancer Architecture and Essential Core Regulatory Circuitry of Chronic Lymphocytic Leukemia
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    sciencedirect.com/science/article/pii/S1535610818304835
  60. journals.sagepub.com journals.sagepub.com
    Phenotypic Screening Following Transcriptomic Deconvolution to Identify Transcription Factors Mediating Axon Growth Induced by a Kinase Inhibitor - Jeffrey A. Lowell, Nicholas O’Neill, Matt C. Danzi, Hassan Al-Ali, John L. Bixby, Vance P. Lemmon, 2021
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    journals.sagepub.com/doi/full/10.1177/24725552211026270
  61. Jun 2021
  62. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The intragenic microRNA miR199A1 in the dynamin 2 gene contributes to the pathology of X-linked centronuclear myopathy
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    ncbi.nlm.nih.gov/pmc/articles/PMC7324510/
  63. May 2021
  64. www.nature.com www.nature.com
    JunB is a key regulator of multiple myeloma bone marrow angiogenesis
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    nature.com/articles/s41375-021-01271-9
  65. Apr 2021
  66. www.cell.com www.cell.com
    Estrogen receptor 2b is the major determinant of sex-typical mating behavior and sexual preference in medaka
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    cell.com/current-biology/abstract/S0960-9822(21)00154-8
  67. Mar 2021
  68. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A previously identified apoptosis inhibitor iASPP confers resistance to chemotherapeutic drugs by suppressing senescence in cancer cells
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    ncbi.nlm.nih.gov/pmc/articles/PMC7086043/
  69. Feb 2021
  70. www.sciencedirect.com www.sciencedirect.com
    The glucocorticoid receptor recruits the COMPASS complex to regulate inflammatory transcription at macrophage enhancers
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    sciencedirect.com/science/article/pii/S2211124721000553
  71. Jan 2021
  72. www.embopress.org www.embopress.org
    Steroid‐dependent switch of OvoL/Shavenbaby controls self‐renewal versus differentiation of intestinal stem cells
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    embopress.org/doi/full/10.15252/embj.2019104347
  73. Dec 2020
  74. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Single-cell multiomic profiling of human lungs reveals cell-type-specific and age-dynamic control of SARS-CoV2 host genes
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    ncbi.nlm.nih.gov/pmc/articles/PMC7688309/
  75. Sep 2020
  76. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    GLI transcriptional repression regulates tissue-specific enhancer activity in response to Hedgehog signaling
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    ncbi.nlm.nih.gov/pmc/articles/PMC6986877/
  77. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    ATR expands embryonic stem cell fate potential in response to replication stress
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    ncbi.nlm.nih.gov/pmc/articles/PMC7067586/
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    Genomic Rewiring of SOX2 Chromatin Interaction Network during Differentiation of ESCs to Postmitotic Neurons
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    sciencedirect.com/science/article/pii/S2405471220301885
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    bpspubs.onlinelibrary.wiley.com/doi/10.1111/bph.15225
  80. Jan 2020
  81. www.sciencedirect.com www.sciencedirect.com
    Single-Molecule Nanoscopy Elucidates RNA Polymerase II Transcription at Single Genes in Live Cells
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    sciencedirect.com/science/article/pii/S0092867419305574
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    A Pan-cancer Transcriptome Analysis Reveals Pervasive Regulation through Alternative Promoters
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    sciencedirect.com/science/article/pii/S0092867419309067
  83. elifesciences.org elifesciences.org
    Neuropeptide B mediates female sexual receptivity in medaka fish, acting in a female-specific but reversible manner
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    elifesciences.org/articles/39495
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    Quantification of Differential Transcription Factor Activity and Multiomics-Based Classification into Activators and Repressors: diffTF
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    sciencedirect.com/science/article/pii/S2211124719314391
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    Metabolic Control of Astrocyte Pathogenic Activity via cPLA2-MAVS
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    sciencedirect.com/science/article/pii/S0092867419312723
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    A Single-Cell Transcriptomic Atlas of Human Neocortical Development during Mid-gestation
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    sciencedirect.com/science/article/pii/S0896627319305616
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    sciencedirect.com/science/article/pii/S2211124719302074
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    Oncogenic Notch Promotes Long-Range Regulatory Interactions within Hyperconnected 3D Cliques
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    sciencedirect.com/science/article/pii/S1097276519300061
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    LRH1-driven transcription factor circuitry for hepatocyte identity: Super-enhancer cistromic analysis
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    sciencedirect.com/science/article/pii/S2352396418306339
  90. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Arid3a regulates nephric tubule regeneration via evolutionarily conserved regeneration signal-response enhancers
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    ncbi.nlm.nih.gov/pmc/articles/PMC6324879/
  91. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Differential effects on neurodevelopment of FTO variants in obesity and bipolar disorder suggested by in silico prediction of functional impact: An analysis in Mexican population
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    onlinelibrary.wiley.com/doi/full/10.1002/brb3.1249
  92. Nov 2018
  93. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Correlated Evolution of Two Copulatory Organs via a Single cis-Regulatory Nucleotide Change
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    pmc.ncbi.nlm.nih.gov/articles/PMC7385753/
  94. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    FoxP2 isoforms delineate spatiotemporal transcriptional networks for vocal learning in the zebra finch
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    ncbi.nlm.nih.gov/pmc/articles/PMC5826274/
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    Long-Range Signaling Activation and Local Inhibition Separate the Mesoderm and Endoderm Lineages
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    sciencedirect.com/science/article/pii/S1534580717309826
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    The Dynamic Landscape of Open Chromatin during Human Cortical Neurogenesis
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    sciencedirect.com/science/article/pii/S0092867417314940
  97. Nov 2017
  98. elifesciences.org elifesciences.org
    Simultaneous measurement of chromatin accessibility, DNA methylation, and nucleosome phasing in single cells
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    elifesciences.org/articles/23203
  99. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Layer-specific chromatin accessibility landscapes reveal regulatory networks in adult mouse visual cortex
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    ncbi.nlm.nih.gov/pmc/articles/PMC5325622/
  100. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Inference of gene regulation functions from dynamic transcriptome data
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    ncbi.nlm.nih.gov/pmc/articles/PMC5072840/