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28 Matching Annotations

Oct 2025
www.sciencedirect.com www.sciencedirect.com

DNA methylation mediates the immunosuppressive tumour microenvironment in metastatic endometrial clear cell carcinoma

1
1. scibot 01 Oct 2025
  
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  RRID:SCR_005177
  
  DOI: 10.1016/j.ebiom.2025.105954
  
  Resource: methylKit (RRID:SCR_005177)
  
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sciencedirect.com/science/article/pii/S2352396425003986
Jul 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Exposing the DNA methylation-responsive compartment of the leukaemic genome in T-ALL cell lines support its potential as a novel therapeutic target in T-ALL

1
1. scibot 08 Jul 2025
  
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  RRID:SCR_005177
  
  DOI: 10.1186/s13148-025-01915-y
  
  Resource: methylKit (RRID:SCR_005177)
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12224799/
Feb 2025
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Potentiating anti-tumor immunity by re-engaging immune synapse molecules

1
1. scibot 25 Feb 2025
  
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  RRID:SCR_005177
  
  DOI: 10.1016/j.xcrm.2025.101975
  
  Resource: methylKit (RRID:SCR_005177)
  
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sciencedirect.com/science/article/pii/S2666379125000485
Dec 2024
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tp53 R217H and R242H mutant zebrafish exhibit dysfunctional p53 hallmarks and recapitulate Li-Fraumeni syndrome phenotypes

1
1. scibot 05 Dec 2024
  
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  RRID:SCR_005177
  
  DOI: 10.1016/j.bbadis.2024.167612
  
  Resource: methylKit (RRID:SCR_005177)
  
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sciencedirect.com/science/article/pii/S0925443924006069
Sep 2024
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A Unique Epigenomic Landscape Defines Human Erythropoiesis

1
1. scibot 25 Sep 2024
  
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  RRID:SCR_005177
  
  DOI: 10.1016/j.celrep.2019.08.020
  
  Resource: methylKit (RRID:SCR_005177)
  
  Curator: @ethanbadger
  
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  RRID:SCR_005177 RRID:SCR_001757 RRIDCUR:Incorrect
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sciencedirect.com/science/article/pii/S2211124719310538
Aug 2024
www.biorxiv.org www.biorxiv.org

tp53 R217H and R242H Mutant Zebrafish Exhibit Dysfunctional p53 Hallmarks and Recapitulate Li-Fraumeni Syndrome Phenotypes

1
1. scibot 20 Aug 2024
  
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  RRID:SCR_005177
  
  DOI: 10.1101/2024.07.31.605368
  
  Resource: methylKit (RRID:SCR_005177)
  
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biorxiv.org/content/10.1101/2024.07.31.605368v1
Jun 2024
onlinelibrary.wiley.com onlinelibrary.wiley.com

Impacts of in-vitro zebularine treatment on genome-wide DNA methylation and transcriptomic profiles in Salix purpurea L.

1
1. scibot 28 Jun 2024
  
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  RRID:SCR_005177
  
  DOI: 10.1111/ppl.14403
  
  Resource: methylKit (RRID:SCR_005177)
  
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onlinelibrary.wiley.com/doi/10.1111/ppl.14403
www.sciencedirect.com www.sciencedirect.com

Individual longitudinal changes in DNA-methylome identify signatures of early-life adversity and correlate with later outcome.

1
1. scibot 04 Jun 2024
  
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  RRID:SCR_005177
  
  DOI: 10.1016/j.ynstr.2024.100652
  
  Resource: methylKit (RRID:SCR_005177)
  
  Curator: @scibot
  
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sciencedirect.com/science/article/pii/S2352289524000481
Feb 2024
www.biorxiv.org www.biorxiv.org

Within-subject changes in methylome profile identify individual signatures of early-life adversity, with a potential to predict neuropsychiatric outcome

1
1. scibot 15 Feb 2024
  
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  RRID:SCR_005177
  
  DOI: 10.1101/2023.12.16.571594
  
  Resource: methylKit (RRID:SCR_005177)
  
  Curator: @scibot
  
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biorxiv.org/content/10.1101/2023.12.16.571594v1
Jan 2024
www.biorxiv.org www.biorxiv.org

Within-subject changes in methylome profile identify individual signatures of early-life adversity, with a potential to predict neuropsychiatric outcome

1
1. scibot 12 Jan 2024
  
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  RRID:SCR_005177
  
  DOI: 10.1101/2023.12.16.571594
  
  Resource: methylKit (RRID:SCR_005177)
  
  Curator: @scibot
  
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biorxiv.org/content/10.1101/2023.12.16.571594v1
Nov 2023
academic.oup.com academic.oup.com

epialleleR: an R/Bioconductor package for sensitive allele-specific methylation analysis in NGS data

1
1. scibot 03 Nov 2023
  
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  RRID:SCR_005177
  
  DOI: 10.1093/gigascience/giad087
  
  Resource: methylKit (RRID:SCR_005177)
  
  Curator: @scibot
  
  SciCrunch record: RRID:SCR_005177
  
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academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad087/7334271
Jan 2023
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

PRC2 Inactivating Mutations in Cancer Enhance Cytotoxic Response to DNMT1 Targeted Therapy via Enhanced Viral Mimicry

1
1. scibot 07 Jan 2023
  
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  RRID:SCR_005177
  
  DOI: 10.1158/2159-8290.CD-21-1671
  
  Resource: methylKit (RRID:SCR_005177)
  
  Curator: @scibot
  
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ncbi.nlm.nih.gov/pmc/articles/PMC9437570/
Nov 2022
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

FOXR2 is an epigenetically regulated pan-cancer oncogene that activates ETS transcriptional circuits

1
1. scibot 02 Nov 2022
  
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  RRID:SCR_005177
  
  DOI: 10.1158/0008-5472.CAN-22-0671
  
  Resource: methylKit (RRID:SCR_005177)
  
  Curator: @scibot
  
  SciCrunch record: RRID:SCR_005177
  
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ncbi.nlm.nih.gov/pmc/articles/PMC9437574/
Oct 2022
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Multiomic characterization and drug testing establish circulating tumor cells as an ex vivo tool for personalized medicine

1
1. scibot 08 Oct 2022
  
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  RRID:SCR_005177
  
  DOI: 10.1016/j.isci.2022.105081
  
  Resource: methylKit (RRID:SCR_005177)
  
  Curator: @scibot
  
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ncbi.nlm.nih.gov/pmc/articles/PMC9529671/
52.53.155.43 52.53.155.43

1-s2.0-S2589004222013530-main-html.html

1
1. scibot 06 Oct 2022
  
  in Public
  
  RRID:SCR_005177
  
  DOI: 10.1093/bib/bbaa156
  
  Resource: methylKit (RRID:SCR_005177)
  
  Curator: @scibot
  
  SciCrunch record: RRID:SCR_005177
  
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52.53.155.43/c48193a37113c2957d0d524999944a402836d9cc/1-s2.0-S2589004222013530-main-html.html
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Human PSCs determine the competency of cerebral organoid differentiation via FGF signaling and epigenetic mechanisms

1
1. scibot 04 Oct 2022
  
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  RRID:SCR_005177
  
  DOI: 10.1016/j.isci.2022.105140
  
  Resource: methylKit (RRID:SCR_005177)
  
  Curator: @scibot
  
  SciCrunch record: RRID:SCR_005177
  
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ncbi.nlm.nih.gov/pmc/articles/PMC9523398/
Aug 2022
52.53.155.43 52.53.155.43

cd-21-1671-html.html

1
1. scibot 27 Aug 2022
  
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  RRID:SCR_005177
  
  DOI: 10.1158/2159-8290.CD-21-1671
  
  Resource: methylKit (RRID:SCR_005177)
  
  Curator: @scibot
  
  SciCrunch record: RRID:SCR_005177
  
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  RRID:SCR_005177
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52.53.155.43/5e67ddaf80a7b90ec85c4b24452e48b76eabacbf/cd-21-1671-html.html
Mar 2022
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Discovery of candidate DNA methylation cancer driver genes

1
1. scibot 04 Mar 2022
  
  in Public
  
  RRID:SCR_005177
  
  DOI: 10.1158/2159-8290.CD-20-1334
  
  Resource: methylKit (RRID:SCR_005177)
  
  Curator: @scibot
  
  SciCrunch record: RRID:SCR_005177
  
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  RRID:SCR_005177
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ncbi.nlm.nih.gov/pmc/articles/PMC8419066/
Feb 2022
link.springer.com link.springer.com

When left does not seem right: epigenetic and bioelectric differences between left- and right-sided breast cancer

1
1. scibot 08 Feb 2022
  
  in Public
  
  RRID:SCR_005177
  
  DOI: 10.1186/s10020-022-00440-5
  
  Resource: methylKit (RRID:SCR_005177)
  
  Curator: @scibot
  
  SciCrunch record: RRID:SCR_005177
  
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  RRID:SCR_005177
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link.springer.com/article/10.1186/s10020-022-00440-5
Aug 2021
www.sciencedirect.com www.sciencedirect.com

Epigenomic and transcriptional profiling identifies impaired glyoxylate detoxification in NAFLD as a risk factor for hyperoxaluria

1
1. scibot 25 Aug 2021
  
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  RRID:SCR_005177
  
  DOI: 10.1016/j.celrep.2021.109526
  
  Resource: methylKit (RRID:SCR_005177)
  
  Curator: @scibot
  
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sciencedirect.com/science/article/pii/S2211124721009578
Jul 2021
elifesciences.org elifesciences.org

Untitled document

1
1. scibot 31 Jul 2021
  
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  RRID:SCR_005177
  
  DOI: 10.7554/eLife.39380
  
  Resource: methylKit (RRID:SCR_005177)
  
  Curator: @evieth
  
  SciCrunch record: RRID:SCR_005177
  
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  RRID:SCR_005177 RRIDCUR:Validated
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RRIDCUR:Validated

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elifesciences.org/articles/39380
www.sciencedirect.com www.sciencedirect.com

Epigenetic Compensation Promotes Liver Regeneration

1
1. scibot 29 Jul 2021
  
  in Public
  
  MethylKit
  
  DOI: 10.1016/j.devcel.2019.05.034
  
  Resource: methylKit (RRID:SCR_005177)
  
  Curator: @Naa003
  
  SciCrunch record: RRID:SCR_005177
  
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  RRIDCUR:Missing RRID:SCR_005177
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sciencedirect.com/science/article/pii/S1534580719304472
Dec 2020
www.sciencedirect.com www.sciencedirect.com

Comprehensive Multi-omics Analysis Reveals Mitochondrial Stress as a Central Biological Hub for Spaceflight Impact

1
1. scibot 07 Dec 2020
  
  in Public
  
  RRID:SCR_005177
  
  DOI: 10.1016/j.cell.2020.11.002
  
  Resource: methylKit (RRID:SCR_005177)
  
  Curator: @Naa003
  
  SciCrunch record: RRID:SCR_005177
  
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  RRIDCUR:Validated RRID:SCR_005177
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sciencedirect.com/science/article/pii/S0092867420314616
Jan 2020
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Epigenetic modifications by polyphenolic compounds alter gene expression in the hippocampus

1
1. scibot 13 Jan 2020
  
  in Public
  
  RRID:SCR_005177
  
  DOI: 10.1242/bio.035196
  
  Resource: methylKit (RRID:SCR_005177)
  
  Curator: @ethanbadger
  
  SciCrunch record: RRID:SCR_005177
  
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  RRID:SCR_005177 RRIDCUR:Validated
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ncbi.nlm.nih.gov/pmc/articles/PMC6215408/
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Untitled document

1
1. scibot 13 Jan 2020
  
  in Public
  
  RRID:SCR_005177
  
  DOI: 10.7554/eLife.39380
  
  Resource: methylKit (RRID:SCR_005177)
  
  Curator: @evieth
  
  SciCrunch record: RRID:SCR_005177
  
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  RRID:SCR_005177 RRIDCUR:Validated
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ncbi.nlm.nih.gov/pmc/articles/PMC6456297/
Nov 2018
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Forniceal deep brain stimulation induces gene expression and splicing changes that promote neurogenesis and plasticity

1
1. scibot 05 Nov 2018
  
  in Public
  
  RRID:SCR_005177
  
  Curator: @evieth
  
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  (methylKit, RRID:SCR_005177)
  
  SciCrunch record: RRID:SCR_005177
  
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  RRID:SCR_005177 RRIDCUR:Validated
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ncbi.nlm.nih.gov/pmc/articles/PMC5906096/
Nov 2017
www.sciencedirect.com www.sciencedirect.com

Stage-Specific Human Induced Pluripotent Stem Cells Map the Progression of Myeloid Transformation to Transplantable Leukemia

1
1. scibot 08 Nov 2017
  
  in Public
  
  methylKit
  
  Curator: @kaitlinsung
  
  Resource used:
  
  (methylKit, RRID:SCR_005177)
  
  SciCrunch record: RRID:SCR_005177
  
  Alternate resolvers: SciCrunch xml N2T identifiers.org
  
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  RRID:SCR_005177 RRIDCUR:Missing
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sciencedirect.com/science/article/pii/S1934590917300310
elifesciences.org elifesciences.org

Epigenetic regulation of lateralized fetal spinal gene expression underlies hemispheric asymmetries

1
1. scibot 08 Nov 2017
  
  in Public
  
  SCR_005177
  
  Resource used:
  
  (methylKit, RRID:SCR_005177)
  
  SciCrunch record: RRID:SCR_005177
  
  Alternate resolvers: SciCrunch xml N2T identifiers.org
  
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  RRID:SCR_005177
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elifesciences.org/articles/22784