67 Matching Annotations
  1. Last 7 days
  2. www.biorxiv.org www.biorxiv.org
    PathoGFAIR: a collection of FAIR and adaptable (meta)genomics workflows for (foodborne) pathogens detection and tracking
    1
    1. scibot 16 Jul 2024
      RRID:SCR_005227

      DOI: 10.1101/2024.06.26.600753

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2024.06.26.600753v1
  3. Jul 2024
  4. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Low-coverage whole genome sequencing for a highly selective cohort of severe COVID-19 patients
    1
    1. scibot 02 Jul 2024
      RRID:SCR_005227

      DOI: 10.46471/gigabyte.127

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC11211761/
  5. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Drought-induced molecular changes in crown of various barley phytohormone mutants
    1
    1. scibot 02 Jul 2024
      RRID:SCR_005227

      DOI: 10.1080/15592324.2024.2371693

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC11210921/
  6. Jun 2024
  7. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Exploring the role of polymorphic interspecies structural variants in reproductive isolation and adaptive divergence in Eucalyptus
    1
    1. scibot 22 Jun 2024
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giae029

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC11170218/
  8. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Uncovering strain- and age-dependent innate immune responses to SARS-CoV-2 infection in air-liquid-interface cultured nasal epithelia
    1
    1. scibot 14 Jun 2024
      RRID:SCR_005227

      DOI: 10.1016/j.isci.2024.110009

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC11166695/
  9. May 2024
  10. www.biorxiv.org www.biorxiv.org
    Unraveling Genome- and Immunome-wide Genetic Diversity in Jaguars (Panthera onca): Implications for Targeted Conservation
    1
    1. scibot 17 May 2024
      RRID:SCR_00522787

      DOI: 10.1101/2024.05.06.592690

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @mzhang007

      SciCrunch record: RRID:SCR_005227

      What is this?
      DOI:10.1101/2024.05.06.592690 RRIDCUR:Unresolved RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2024.05.06.592690v1
  11. www.sciencedirect.com www.sciencedirect.com
    Genome sequence analyses identify novel risk loci for multiple system atrophy
    1
    1. scibot 03 May 2024
      RRID:SCR_005227

      DOI: 10.1016/j.neuron.2024.04.002

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S089662732400240X
  12. Apr 2024
  13. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Enhanced bovine genome annotation through integration of transcriptomics and epi-transcriptomics datasets facilitates genomic biology
    1
    1. scibot 20 Apr 2024
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giae019

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC11020238/
  14. Mar 2024
  15. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A novel type of monocytic leukemia stem cell revealed by the clinical use of venetoclax-based therapy
    1
    1. scibot 06 Mar 2024
      RRID:SCR_005227

      DOI: 10.1158/2159-8290.CD-22-1297

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10527971/
  16. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Establishment and characterization of an Epstein-Barr virus-positive cell line from a non-keratinizing differentiated primary nasopharyngeal carcinoma
    1
    1. scibot 06 Mar 2024
      RRID:SCR_005227

      DOI: 10.1158/2767-9764.CRC-23-0341

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10911800/
  17. Feb 2024
  18. www.biorxiv.org www.biorxiv.org
    Low-coverage whole genome sequencing for a highly selective cohort of severe COVID-19 patients
    1
    1. scibot 15 Feb 2024
      RRID:SCR_005227

      DOI: 10.1101/2024.01.28.577610

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2024.01.28.577610v1
  19. Jan 2024
  20. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Near chromosome-level and highly repetitive genome assembly of the snake pipefish Entelurus aequoreus (Syngnathiformes: Syngnathidae)
    1
    1. scibot 20 Jan 2024
      RRID:SCR_005227

      DOI: 10.46471/gigabyte.105

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10795108/
  21. dx.doi.org dx.doi.org
    The chromosome-scale genome of Magnolia sinica (Magnoliaceae) provides insights into the conservation of plant species with extremely small populations (PSESP)
    1
    1. scibot 18 Jan 2024
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giad110

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    dx.doi.org/10.1093/gigascience/giad110
  22. Dec 2023
  23. www.sciencedirect.com www.sciencedirect.com
    Genetic swamping of the critically endangered Scottish wildcat was recent and accelerated by disease
    1
    1. scibot 02 Dec 2023
      RRID:SCR_005227

      DOI: 10.1016/j.cub.2023.10.026

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S0960982223014240
  24. Nov 2023
  25. link.springer.com link.springer.com
    Development of SNP markers to identify the sex of the giant panda from naturally degraded fecal samples
    1
    1. scibot 25 Nov 2023
      RRID:SCR_005227

      DOI: 10.1007/s12686-023-01326-2

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    link.springer.com/article/10.1007/s12686-023-01326-2
  26. Oct 2023
  27. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level reference genome of tetraploid Isoetes sinensis provides insights into evolution and adaption of lycophytes
    1
    1. scibot 05 Oct 2023
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giad079

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10541799/
  28. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Construction and analysis of the chromosome-level haplotype-resolved genomes of two Crassostrea oyster congeners: Crassostrea angulata and Crassostrea gigas
    1
    1. scibot 05 Oct 2023
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giad077

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10546077/
  29. Sep 2023
  30. 52.53.155.43 52.53.155.43
    jkad203-html.html
    1
    1. scibot 22 Sep 2023
      RRID:SCR_005227

      DOI: 10.1093/g3journal/jkad203

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    52.53.155.43/213eef494e744243d5c25ee25ef9fbca7c526326/jkad203-html.html
  31. www.sciencedirect.com www.sciencedirect.com
    Integration of eQTL and machine learning to dissect causal genes with pleiotropic effects in genetic regulation networks of seed cotton yield
    1
    1. scibot 08 Sep 2023
      RRID:SCR_005227

      DOI: 10.1016/j.celrep.2023.113111

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2211124723011221
  32. Aug 2023
  33. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome resequencing reveals independent domestication and breeding improvement of naked oat
    1
    1. scibot 03 Aug 2023
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giad061

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10390318/
  34. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome-Wide SNP and Indel Discovery in Abaca (Musa textilis Née) and among Other Musa spp. for Abaca Genetic Resources Management
    1
    1. scibot 01 Aug 2023
      RRID:SCR_005227

      DOI: 10.3390/cimb45070365

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10377871/
  35. Jul 2023
  36. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A new haplotype-resolved turkey genome to enable turkey genetics and genomics research
    1
    1. scibot 25 Jul 2023
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giad051

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10360393/
  37. Jun 2023
  38. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Identification of transcriptional regulatory variants in pig duodenum, liver, and muscle tissues
    1
    1. scibot 27 Jun 2023
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giad042

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10290502/
  39. May 2023
  40. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Novel variants underlying autosomal recessive neurodevelopmental disorders with intellectual disability in Iranian consanguineous families
    1
    1. scibot 05 May 2023
      SCR_005227

      DOI: 10.1002/jcla.24241

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @evieth

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    onlinelibrary.wiley.com/doi/full/10.1002/jcla.24241
  41. Apr 2023
  42. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Structurally Complex Osteosarcoma Genomes Exhibit Limited Heterogeneity within Individual Tumors and across Evolutionary Time
    1
    1. scibot 14 Apr 2023
      RRID:SCR_005227

      DOI: 10.1158/2767-9764.CRC-22-0348

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10093779/
  43. Mar 2023
  44. europepmc.org europepmc.org
    Metagenomic analysis of coastal Kenya female Aedes aegypti mosquito ...
    2
    1. scibot 30 Mar 2023
      RRID:SCR_005227

      DOI: 10.12688/wellcomeopenres.18868.1

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    2. scibot 30 Mar 2023
      RRID:SCR_005227

      DOI: 10.12688/wellcomeopenres.18868.1

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    europepmc.org/article/ppr/ppr634883
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic Resources for the North American Water Vole (Microtus richardsoni) and the Montane Vole (Microtus montanus)
    1
    1. scibot 02 Mar 2023
      RRID:SCR_005227

      DOI: 10.46471/gigabyte.19

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9631978/
  46. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    De novo chromosome-length assembly of the mule deer (Odocoileus hemionus) genome
    1
    1. scibot 02 Mar 2023
      RRID:SCR_005227

      DOI: 10.46471/gigabyte.34

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9650288/
  47. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A phased, chromosome-scale genome of ‘Honeycrisp’ apple (Malus domestica)
    1
    1. scibot 02 Mar 2023
      RRID:SCR_005227

      DOI: 10.46471/gigabyte.69

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9693968/
  48. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A genome assembly of the Atlantic chub mackerel (Scomber colias): a valuable teleost fishing resource
    1
    1. scibot 02 Mar 2023
      RRID:SCR_005227

      DOI: 10.46471/gigabyte.40

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9650269/
  49. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Sex-based de novo transcriptome assemblies of the parasitoid wasp Encarsia suzannae, a host of the manipulative heritable symbiont Cardinium hertigii
    1
    1. scibot 02 Mar 2023
      RRID:SCR_005227

      DOI: 10.46471/gigabyte.68

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9693781/
  50. Feb 2023
  51. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Expansion and loss of sperm nuclear basic protein genes in Drosophila correspond with genetic conflicts between sex chromosomes
    1
    1. scibot 15 Feb 2023
      RRID:SCR_005227

      DOI: 10.7554/eLife.85249

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9917458/
  52. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A molecular phenotypic map of malignant pleural mesothelioma
    1
    1. scibot 02 Feb 2023
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giac128

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9881451/
  53. Jan 2023
  54. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome Reporting for Healthy Populations—Pipeline for Genomic Screening from the GENCOV COVID‐19 Study
    1
    1. scibot 28 Jan 2023
      RRID:SCR_005227

      DOI: 10.1002/cpz1.534

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9874607/
  55. Dec 2022
  56. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Near-chromosomal de novo assembly of Bengal tiger genome reveals genetic hallmarks of apex predation
    1
    1. scibot 30 Dec 2022
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giac112

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9795480/
  57. www.sciencedirect.com www.sciencedirect.com
    Protocol to analyze population structure and migration history based on human genome variation data
    1
    1. scibot 18 Dec 2022
      RRID:SCR_005227

      DOI: 10.1016/j.xpro.2022.101928

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2666166722008085
  58. Nov 2022
  59. www.sciencedirect.com www.sciencedirect.com
    A single-cell transcriptome atlas of glial diversity in the human hippocampus across the postnatal lifespan
    1
    1. scibot 04 Nov 2022
      RRID:SCR_005227

      DOI: 10.1016/j.stem.2022.09.010

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1934590922004180
  60. Oct 2022
  61. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly for the Aldabra giant tortoise enables insights into the genetic health of a threatened population
    1
    1. scibot 26 Oct 2022
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giac090

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9553416/
  62. Aug 2022
  63. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The evolution of a counter-defense mechanism in a virus constrains its host range
    1
    1. scibot 26 Aug 2022
      RRID:SCR_005227

      DOI: 10.7554/eLife.79549

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9391042/
  64. Jul 2022
  65. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level assembly and annotation of the blue catfish Ictalurus furcatus, an aquaculture species for hybrid catfish reproduction, epigenetics, and heterosis studies
    1
    1. scibot 14 Jul 2022
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giac070

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9270728/
  66. Jun 2022
  67. www.nature.com www.nature.com
    The first long-read nuclear genome assembly of Oryza australiensis, a wild rice from northern Australia
    1
    1. scibot 28 Jun 2022
      RRID:SCR_005227

      DOI: 10.1038/s41598-022-14893-5

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41598-022-14893-5
  68. aacrjournals.org aacrjournals.org
    Quantification of neoantigen-mediated immunoediting in cancer evolution
    1
    1. scibot 18 Jun 2022
      RRID:SCR_005227

      DOI: 10.1158/0008-5472.CAN-21-3717

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    aacrjournals.org/cancerres/article/82/12/2226/699353/Quantification-of-Neoantigen-Mediated
  69. May 2022
  70. f1000research.com f1000research.com
    F1000Research Article: The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms.
    1
    1. scibot 21 May 2022
      RRID:SCR_005227

      DOI: 10.12688/f1000research.110194.1

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    f1000research.com/articles/11-530
  71. gigabytejournal.com gigabytejournal.com
    LT1, an ONT long-read-based assembly scaffolded with Hi-C data and polished with short reads
    1
    1. scibot 10 May 2022
      RRID:SCR_005227

      DOI: 10.46471/gigabyte.51

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    gigabytejournal.com/articles/51
  72. Mar 2022
  73. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-length genome assembly and linkage map of a critically endangered Australian bird: the helmeted honeyeater
    1
    1. scibot 31 Mar 2022
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giac025

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8963300/
  74. link.springer.com link.springer.com
    GWAS in people of Middle Eastern descent reveals a locus protective of kidney function—a cross-sectional study
    1
    1. scibot 01 Mar 2022
      RRID:SCR_005227

      DOI: 10.1186/s12916-022-02267-7

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    link.springer.com/article/10.1186/s12916-022-02267-7
  75. Feb 2022
  76. academic.oup.com academic.oup.com
    An improved ovine reference genome assembly to facilitate in-depth functional annotation of the sheep genome
    1
    1. scibot 12 Feb 2022
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giab096

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giab096/6521876
  77. Nov 2021
  78. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A sex-specific evolutionary interaction between ADCY9 and CETP
    1
    1. scibot 19 Nov 2021
      RRID:SCR_005227

      DOI: 10.7554/eLife.69198

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8594919/
  79. Aug 2021
  80. www.sciencedirect.com www.sciencedirect.com
    Proneural genes define ground-state rules to regulate neurogenic patterning and cortical folding
    1
    1. scibot 18 Aug 2021
      RRID:SCR_005227

      DOI: 10.1016/j.neuron.2021.07.007

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S0896627321005067
  81. www.sciencedirect.com www.sciencedirect.com
    Enhancer RNA m6A methylation facilitates transcriptional condensate formation and gene activation
    1
    1. scibot 15 Aug 2021
      RRID:SCR_005227

      DOI: 10.1016/j.molcel.2021.07.024

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1097276521005931
  82. academic.oup.com academic.oup.com
    Untitled document
    1
    1. scibot 10 Aug 2021
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giy141

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    academic.oup.com/gigascience/article/7/12/giy141/5202467
  83. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
    1
    1. scibot 08 Aug 2021
      RRID:SCR_005227

      DOI: 10.7554/eLife.34364

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC6175580/
  84. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
    1
    1. scibot 05 Aug 2021
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giy141

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC6304105/
  85. www.sciencedirect.com www.sciencedirect.com
    Untitled document
    1
    1. scibot 03 Aug 2021
      RRID:SCR_005227

      DOI: 10.1016/j.cub.2018.11.055

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S0960982218315549
  86. Jul 2021
  87. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
    1
    1. scibot 27 Jul 2021
      RRID:SCR_005227

      DOI: 10.7554/eLife.28023

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC5595439/
  88. May 2021
  89. www.sciencedirect.com www.sciencedirect.com
    Transcriptional Programs of Circuit Assembly in the Drosophila Visual System
    1
    1. scibot 08 May 2021
      RRID:SCR_005227

      DOI: 10.1016/j.neuron.2020.10.006

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S0896627320307741
  90. www.sciencedirect.com www.sciencedirect.com
    POLE Mutation Spectra Are Shaped by the Mutant Allele Identity, Its Abundance, and Mismatch Repair Status
    1
    1. scibot 07 May 2021
      RRID:SCR_005227

      DOI: 10.1016/j.molcel.2020.05.012

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1097276520303130
  91. onlinelibrary.wiley.com onlinelibrary.wiley.com
    How to characterize a strain? Clonal heterogeneity in industrial Saccharomyces influences both phenotypes and heterogeneity in phenotypes
    1
    1. scibot 06 May 2021
      RRID:SCR_005227

      DOI: 10.1002/yea.3562

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    onlinelibrary.wiley.com/doi/10.1002/yea.3562
  92. www.sciencedirect.com www.sciencedirect.com
    Whole-genome analysis of giraffe supports four distinct species
    1
    1. scibot 06 May 2021
      RRID:SCR_005227

      DOI: 10.1016/j.cub.2021.04.033

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @scibot

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S0960982221005467
  93. Apr 2021
  94. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A common 1.6 mb Y-chromosomal inversion predisposes to subsequent deletions and severe spermatogenic failure in humans
    1
    1. scibot 02 Apr 2021
      RRID:SCR_005227

      DOI: 10.7554/eLife.65420

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @evieth

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRIDCUR:Validated RRID:SCR_005227
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8009663/
  95. Mar 2021
  96. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    New Insights Into Mitochondrial DNA Reconstruction and Variant Detection in Ancient Samples
    1
    1. scibot 09 Mar 2021
      RRID:SCR_005227

      DOI: 10.3389/fgene.2021.619950

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @evieth

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227 RRIDCUR:Validated
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC7930628/
  97. Sep 2020
  98. www.mdpi.com www.mdpi.com
    Investigating Human Mitochondrial Genomes in Single Cells
    1
    1. scibot 15 Sep 2020
      RRID:SCR_005227

      DOI: 10.3390/genes11050534

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @Naa003

      SciCrunch record: RRID:SCR_005227

      What is this?
      RRID:SCR_005227 RRIDCUR:Validated
    Visit annotations in context

    Tags

    Annotators

    URL

    mdpi.com/2073-4425/11/5/534
  99. Jan 2020
  100. www.sciencedirect.com www.sciencedirect.com
    A Patient-Derived Glioblastoma Organoid Model and Biobank Recapitulates Inter- and Intra-tumoral Heterogeneity
    1
    1. scibot 13 Jan 2020
      RRID:SCR_005227

      DOI: 10.1016/j.cell.2019.11.036

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @ethanbadger

      SciCrunch record: RRID:SCR_005227

      What is this?

      RRID:SCR_005227 RRIDCUR:Validated
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S0092867419313212
  101. academic.oup.com academic.oup.com
    De novo genome assembly of the endangered Acer yangbiense , a plant species with extremely small populations endemic to Yunnan Province, China
    1
    1. scibot 13 Jan 2020
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giz085

      Resource: SAMtools/BCFtools (RRID:SCR_005227)

      Curator: @Naa003

      SciCrunch record: RRID:SCR_005227

      What is this?

      RRID:SCR_005227 RRIDCUR:Validated
    Visit annotations in context

    Tags

    Annotators

    URL

    academic.oup.com/gigascience/article/8/7/giz085/5532406
  102. Nov 2017
  103. elifesciences.org elifesciences.org
    Cell differentiation defines acute and chronic infection cell types in Staphylococcus aureus
    1
    1. scibot 08 Nov 2017
      RRID:SCR_005227

      Curator: @kaitlinsung

      Resource used:

      (SAMtools/BCFtools, RRID:SCR_005227)

      SciCrunch record: RRID:SCR_005227

      Alternate resolvers: SciCrunch xml N2T identifiers.org

      What is this?

      RRID:SCR_005227 RRIDCUR:Validated
    Visit annotations in context

    Tags

    Annotators

    URL

    elifesciences.org/articles/28023
  104. academic.oup.com academic.oup.com
    An expanded mammal mitogenome dataset from Southeast Asia
    1
    1. scibot 08 Nov 2017
      RRID:SCR_005227

      Curator: @patriciaelyse_

      Resource used:

      (SAMtools/BCFtools, RRID:SCR_005227)

      SciCrunch record: RRID:SCR_005227

      Alternate resolvers: SciCrunch xml N2T identifiers.org

      What is this?

      RRID:SCR_005227 RRIDCUR:Validated
    Visit annotations in context

    Tags

    Annotators

    URL

    academic.oup.com/gigascience/article/6/8/1/3958782/An-expanded-mammal-mitogenome-dataset-from