112 Matching Annotations
  1. Mar 2026
  2. academic.oup.com academic.oup.com
    Defensive diminishment: A chromosome-scale reference genome assembly of pigeonpea wild relative Cajanus platycarpus (Benth.) highlights the evolutionary decline of defence genes in Cajanus cajan (L.)
    1
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    academic.oup.com/jxb/article-abstract/76/20/6166/8219647
  3. Oct 2025
  4. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Comparative genomics and multiomics analyses reveal the evolution and physiological basis of rubber biosynthesis in Hevea species
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12512020/
  5. Aug 2025
  6. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Telomere-to-telomere African wild rice (Oryza longistaminata) reference genome reveals segmental and structural variation
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12360840/
  7. Jul 2025
  8. dx.doi.org dx.doi.org
    Telomere-to-telomere chromosome-scale genome assemblies of black and golden koi carp variants support construction of an ancient karyotype of Cypriniformes
    1
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    dx.doi.org/10.1093/gigascience/giaf073
  9. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A telomere-to-telomere gapless genome reveals SlPRR1 control of circadian rhythm and photoperiodic flowering in tomato
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12218202/
  10. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The genome of Hippophae salicifolia provides new insights into the sexual differentiation of sea buckthorn
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12218201/
  11. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The telomere-to-telomere gapless genome of grass carp provides insights for genetic improvement
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12204074/
  12. Jun 2025
  13. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Chromosome-level genome assembly and methylome profile yield insights for the conservation of endangered loggerhead sea turtles
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12143204/
  14. May 2025
  15. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Chromosome-level genome assemblies of five Sinocyclocheilus species
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12089701/
  16. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A near telomere-to-telomere genome assembly of the Jinhua pig: enabling more accurate genetic research
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12080228/
  17. Mar 2025
  18. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Genomic and transcriptomic analyses of Heteropoda venatoria reveal the expansion of P450 family for starvation resistance in spiders
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11927401/
  19. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The assembly and annotation of two teinturier grapevine varieties, Dakapo and Rubired
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11891882/
  20. Feb 2025
  21. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The telomere-to-telomere genome of flowering cherry (Prunus campanulata) reveals genomic evolution of the subgenus Cerasus
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11843098/
  22. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Enhancing inbreeding estimation and global conservation insights through chromosome-level assemblies of the Chinese and Malayan pangolin
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11825179/
  23. Jan 2025
  24. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Diaci v3.0: chromosome-level assembly, de novo transcriptome, and manual annotation of Diaphorina citri, insect vector of Huanglongbing
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11659978/
  25. Dec 2024
  26. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The chromosome-level genome assembly of an endangered herb Bergenia scopulosa provides insights into local adaptation and genomic vulnerability under climate change
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11604060/
  27. Nov 2024
  28. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Chromosome-level genome assembly and annotation of the crested gecko, Correlophus ciliatus, a lizard incapable of tail regeneration
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11558660/
  29. Sep 2024
  30. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Whole-genome sequencing of the invasive golden apple snail Pomacea canaliculata from Asia reveals rapid expansion and adaptive evolution
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11417965/
  31. Aug 2024
  32. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome report: First reference genome of Vaccinium floribundum Kunth, an emblematic Andean species
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11304950/
  33. Jun 2024
  34. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Post-meiotic mechanism of facultative parthenogenesis in gonochoristic whiptail lizard species
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11161175/
  35. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The telomere-to-telomere (T2T) genome of Peucedanum praeruptorum Dunn provides insights into the genome evolution and coumarin biosynthesis
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11152176/
  36. May 2024
  37. www.sciencedirect.com www.sciencedirect.com
    Reciprocal conversion between annual and polycarpic perennial flowering behavior in the Brassicaceae
    3
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    sciencedirect.com/science/article/pii/S0092867424004732
  38. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    De novo transcriptome assembly and genome annotation of the fat-tailed dunnart (Sminthopsis crassicaudata)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11091235/
  39. Mar 2024
  40. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome of the poultry shaft louse Menopon gallinae provides insight into the host-switching and adaptive evolution of parasitic lice
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10904027/
  41. Feb 2024
  42. gigabytejournal.com gigabytejournal.com
    The genome assembly and annotation of the white-lipped tree pit viper Trimeresurus albolabris
    1
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    gigabytejournal.com/articles/106
  43. Dec 2023
  44. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of the Pacific geoduck Panopea generosa reveals major inter- and intrachromosomal rearrangements and substantial expansion of the copine gene family
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10729735/
  45. gigabytejournal.com gigabytejournal.com
    Genome assembly and annotation of the king ratsnake, Elaphe carinata
    1
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    gigabytejournal.com/articles/101
  46. Nov 2023
  47. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly and annotation of the Brown-Spotted Pit viper Protobothrops mucrosquamatus
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10644238/
  48. Oct 2023
  49. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome of the venomous snail Kalloconus canariensis: a valuable model for venomics and comparative genomics
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10541794/
  50. Jul 2023
  51. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic analyses provide insights into the evolution and salinity adaptation of halophyte Tamarix chinensis
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10370455/
  52. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genome assembly and annotation of the many-banded krait, Bungarus multicinctus
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10315667/
  53. May 2023
  54. academic.oup.com academic.oup.com
    Comparative genomics revealed drastic gene difference in two small Chinese perches, Siniperca undulata and S. obscura
    1
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    academic.oup.com/g3journal/advance-article/doi/10.1093/g3journal/jkad101/7157186
  55. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of an Australian native grass species reveals a recent whole-genome duplication and biased gene retention of genes involved in stress response
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10176504/
  56. Apr 2023
  57. academic.oup.com academic.oup.com
    GEN-ERA toolbox: unified and reproducible workflows for research in microbial genomics
    1
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad022/7111624
  58. Mar 2023
  59. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the roundjaw bonefish (Albula glossodonta), a vulnerable circumtropical sportfish
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10038134/
  60. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of a benthic associated Syngnathiformes species: the common dragonet, Callionymus lyra
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9631949/
  61. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Annotation of chitin biosynthesis genes in Diaphorina citri, the Asian citrus psyllid
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9631950/
  62. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic Resources for the North American Water Vole (Microtus richardsoni) and the Montane Vole (Microtus montanus)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9631978/
  63. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Draft genome of the aquatic moss Fontinalis antipyretica (Fontinalaceae, Bryophyta)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9631980/
  64. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    In silico characterization of chitin deacetylase genes in the Diaphorina citri genome
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9632012/
  65. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Annotation of putative circadian rhythm-associated genes in Diaphorina citri (Hemiptera: Liviidae)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9662589/
  66. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genome of the mustard hill coral, Porites astreoides
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9693771/
  67. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Annotation of glycolysis, gluconeogenesis, and trehaloneogenesis pathways provide insight into carbohydrate metabolism in the Asian citrus psyllid
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9933520/
  68. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic identification, annotation, and comparative analysis of Vacuolar-type ATP synthase subunits in Diaphorina citri
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9933544/
  69. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9631960/
  70. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Utilizing a chromosomal-length genome assembly to annotate the Wnt signaling pathway in the Asian citrus psyllid, Diaphorina citri
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9631999/
  71. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The draft genome assembly of the critically endangered Nyssa yunnanensis, a plant species with extremely small populations endemic to Yunnan Province, China
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9632040/
  72. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Long-read HiFi sequencing correctly assembles repetitive heavy fibroin silk genes in new moth and caddisfly genomes
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9693786/
  73. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Ubiquitin-proteasome pathway annotation in Diaphorina citri can reveal potential targets for RNAi-based pest management
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9933519/
  74. Feb 2023
  75. www.sciencedirect.com www.sciencedirect.com
    A chromosome-level genome assembly of Ostrea denselamellosa provides initial insights into its evolution
    1
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    sciencedirect.com/science/article/pii/S0888754323000265
  76. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of goose provides insight into the adaptation and growth of local goose breeds
    1
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad003/7025323
  77. Jan 2023
  78. www.nature.com www.nature.com
    A chromosome-level genome assembly of Plantago ovata
    1
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    nature.com/articles/s41598-022-25078-5
  79. www.biorxiv.org www.biorxiv.org
    A chromosome-scale assembly for tetraploid sour cherry (Prunus cerasus L.) ‘Montmorency’ identifies three distinct ancestral Prunus genomes
    1
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    biorxiv.org/content/10.1101/2023.01.10.523438v1
  80. Dec 2022
  81. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A Chromosome-level assembly of the Japanese eel genome, insights into gene duplication and chromosomal reorganization
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9730501/
  82. Sep 2022
  83. www.sciencedirect.com www.sciencedirect.com
    Genomic analysis reveals cryptic diversity in aphelids and sheds light on the emergence of Fungi
    1
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    sciencedirect.com/science/article/pii/S0960982222013938
  84. Aug 2022
  85. www.sciencedirect.com www.sciencedirect.com
    The sage genome provides insight into the evolutionary dynamics of diterpene biosynthesis gene cluster in plants
    1
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    sciencedirect.com/science/article/pii/S2211124722010531
  86. Jul 2022
  87. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level assembly and annotation of the blue catfish Ictalurus furcatus, an aquaculture species for hybrid catfish reproduction, epigenetics, and heterosis studies
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9270728/
  88. academic.oup.com academic.oup.com
    Manchurian Walnut Genome: Insights into Juglone and Lipid Biosynthesis
    1
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac057/6619298
  89. May 2022
  90. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level reference genome of Ensete glaucum gives insight into diversity and chromosomal and repetitive sequence evolution in the Musaceae
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9055855/
  91. Apr 2022
  92. www.sciencedirect.com www.sciencedirect.com
    A chromosome-level genome of the human blood fluke Schistosoma japonicum identifies the genomic basis of host-switching
    1
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    sciencedirect.com/science/article/pii/S2211124722003904
  93. Mar 2022
  94. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    High-quality assembly of the reference genome for scarlet sage, Salvia splendens, an economically important ornamental plant
    1
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    ncbi.nlm.nih.gov/labs/pmc/articles/PMC6030905/
  95. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Single-molecule sequencing and optical mapping yields an improved genome of woodland strawberry (Fragaria vesca) with chromosome-scale contiguity
    1
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    ncbi.nlm.nih.gov/labs/pmc/articles/PMC5801600/
  96. Dec 2021
  97. www.mdpi.com www.mdpi.com
    Chromosomal-Level Assembly of Antarctic Scaly Rockcod, Trematomus loennbergii Genome Using Long-Read Sequencing and Chromosome Conformation Capture (Hi-C) Technologies
    1
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    mdpi.com/1424-2818/13/12/668
  98. academic.oup.com academic.oup.com
    A high-resolution genome of an euryhaline and eurythermal rhinogoby (Rhinogobius similis Gill 1895)
    1
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    academic.oup.com/g3journal/advance-article/doi/10.1093/g3journal/jkab395/6430980
  99. Aug 2021
  100. academic.oup.com academic.oup.com
    Untitled document
    1
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    academic.oup.com/gigascience/article/8/4/giz033/5429686
  101. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC5597851/
  102. academic.oup.com academic.oup.com
    Untitled document
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    academic.oup.com/gigascience/article/7/7/giy068/5040257
  103. academic.oup.com academic.oup.com
    Untitled document
    1
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    academic.oup.com/gigascience/article/6/8/gix060/4004833
  104. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
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    ncbi.nlm.nih.gov/pmc/articles/PMC6279123/
  105. Jul 2021
  106. academic.oup.com academic.oup.com
    Untitled document
    1
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    academic.oup.com/gigascience/article/7/2/gix124/4739363
  107. academic.oup.com academic.oup.com
    Comparative analyses identify genomic features potentially involved in the evolution of birds-of-paradise
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    academic.oup.com/gigascience/article/8/5/giz003/5300102
  108. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
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    ncbi.nlm.nih.gov/pmc/articles/PMC5751067/
  109. academic.oup.com academic.oup.com
    Untitled document
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    academic.oup.com/gigascience/article/8/4/giz027/5426569
  110. www.mdpi.com www.mdpi.com
    Genome of the Southern Giant Petrel Assembled Using Third-Generation DNA Sequencing and Linked Reads Reveals Evolutionary Traits of Southern Avian
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    mdpi.com/2076-2615/11/7/2046
  111. Jun 2021
  112. academic.oup.com academic.oup.com
    The genome of the venomous snail Lautoconus ventricosus sheds light on the origin of conotoxin diversity
    1
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    academic.oup.com/gigascience/article/10/5/giab037/6284011
  113. Mar 2021
  114. academic.oup.com academic.oup.com
    A chromosome‐level genome of the spider Trichonephila antipodiana reveals the genetic basis of its polyphagy and evidence of an ancient whole-genome duplication event
    1
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    academic.oup.com/gigascience/article/10/3/giab016/6178709
  115. Feb 2021
  116. academic.oup.com academic.oup.com
    The draft genome sequence of the grove snail Cepaea nemoralis
    1
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    academic.oup.com/g3journal/article-abstract/11/2/jkaa071/6080775
  117. www.mdpi.com www.mdpi.com
    The Genome Assembly and Annotation of the Southern Elephant Seal Mirounga leonina
    1
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    mdpi.com/2073-4425/11/2/160
  118. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosomal assembly of the Antarctic toothfish (Dissostichus mawsoni) genome using third-generation DNA sequencing and Hi-C technology
    2
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    ncbi.nlm.nih.gov/pmc/articles/PMC7840457/
  119. Dec 2020
  120. academic.oup.com academic.oup.com
    Chromosomal genome of Triplophysa bleekeri provides insights into its evolution and environmental adaptation
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    academic.oup.com/gigascience/article/9/11/giaa132/5999722
  121. Sep 2020
  122. www.g3journal.org www.g3journal.org
    High-Quality Genome Assembly and Annotation of the Big-Eye Mandarin Fish (Siniperca knerii)
    1
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    g3journal.org/content/10/3/877
  123. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level de novo assembly of the pig-tailed macaque genome using linked-read sequencing and HiC proximity scaffolding
    1
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