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  1. Oct 2025
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    Chromosome-specific epigenetic control and transmission of ribosomal DNA arrays in Hominidae genomes
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    sciencedirect.com/science/article/pii/S2666979X25002873
  3. May 2025
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    DNA methyltransferase 1 modulates mitochondrial function through bridging m5C RNA methylation
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    sciencedirect.com/science/article/pii/S1097276525003612
  5. Apr 2025
  6. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Non-invasive multi-cancer detection using DNA hypomethylation of LINE-1 retrotransposons
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    pmc.ncbi.nlm.nih.gov/articles/PMC11959274/
  7. Feb 2025
  8. 52.53.155.43 52.53.155.43
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  9. Jan 2025
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    Increased local DNA methylation disorder in AMLs with DNMT3A-destabilizing variants and its clinical implication
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    pmc.ncbi.nlm.nih.gov/articles/PMC11724044/
  11. Jul 2024
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    Gapless genome assembly and epigenetic profiles reveal gene regulation of whole-genome triplication in lettuce
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    ncbi.nlm.nih.gov/pmc/articles/PMC11238431/
  13. Jun 2024
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    Impacts of in-vitro zebularine treatment on genome-wide DNA methylation and transcriptomic profiles in Salix purpurea L.
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    onlinelibrary.wiley.com/doi/10.1111/ppl.14403
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    Individual longitudinal changes in DNA-methylome identify signatures of early-life adversity and correlate with later outcome.
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    sciencedirect.com/science/article/pii/S2352289524000481
  16. May 2024
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    MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons
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  18. Feb 2024
  19. www.biorxiv.org www.biorxiv.org
    Within-subject changes in methylome profile identify individual signatures of early-life adversity, with a potential to predict neuropsychiatric outcome
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    biorxiv.org/content/10.1101/2023.12.16.571594v1
  20. Jan 2024
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    Within-subject changes in methylome profile identify individual signatures of early-life adversity, with a potential to predict neuropsychiatric outcome
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    biorxiv.org/content/10.1101/2023.12.16.571594v1
  22. Dec 2023
  23. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    OvaPrintâ„¢ - a cell-free DNA methylation liquid biopsy for the risk assessment of high-grade serous ovarian cancer
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    ncbi.nlm.nih.gov/pmc/articles/PMC10722131/
  24. 52.53.155.43 52.53.155.43
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  25. Nov 2023
  26. academic.oup.com academic.oup.com
    epialleleR: an R/Bioconductor package for sensitive allele-specific methylation analysis in NGS data
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad087/7334271
  27. Oct 2023
  28. www.nature.com www.nature.com
    TET2 lesions enhance the aggressiveness of CEBPA-mutant acute myeloid leukemia by rebalancing GATA2 expression
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    nature.com/articles/s41467-023-41927-x
  29. Sep 2023
  30. www.sciencedirect.com www.sciencedirect.com
    Perturbations in 3D genome organization can promote acquired drug resistance
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    sciencedirect.com/science/article/pii/S2211124723011361
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  32. Aug 2023
  33. 52.53.155.43 52.53.155.43
    Evaluation of cytosine conversion methods for whole-genome DNA methylation profiling
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  34. Jun 2023
  35. aacrjournals.org aacrjournals.org
    Comprehensive DNA methylation analysis indicates that pancreatic intraepithelial neoplasia lesions are acinar-derived and epigenetically primed for carcinogenesis
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    aacrjournals.org/cancerres/article/83/11/1905/726442/Comprehensive-DNA-Methylation-Analysis-Indicates
  36. May 2023
  37. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    DNA methylation changes underlie the long-term association between periodontitis and atherosclerotic cardiovascular disease
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    ncbi.nlm.nih.gov/pmc/articles/PMC10160482/
  38. Jan 2023
  39. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Cancer stem cells, not bulk tumor cells, determine mechanisms of resistance to SMO inhibitors
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    ncbi.nlm.nih.gov/pmc/articles/PMC9853917/
  40. Nov 2022
  41. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    FOXR2 is an epigenetically regulated pan-cancer oncogene that activates ETS transcriptional circuits
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    ncbi.nlm.nih.gov/pmc/articles/PMC9437574/
  42. Oct 2022
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Multiomic characterization and drug testing establish circulating tumor cells as an ex vivo tool for personalized medicine
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    ncbi.nlm.nih.gov/pmc/articles/PMC9529671/
  44. 52.53.155.43 52.53.155.43
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  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Human PSCs determine the competency of cerebral organoid differentiation via FGF signaling and epigenetic mechanisms
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    ncbi.nlm.nih.gov/pmc/articles/PMC9523398/
  46. Sep 2022
  47. aacrjournals.org aacrjournals.org
    PU.1-dependent enhancer inhibition separates Tet2-deficient hematopoiesis from malignant transformation
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    aacrjournals.org/bloodcancerdiscov/article/3/5/444/708355/PU-1-Dependent-Enhancer-Inhibition-Separates-Tet2
  48. Jun 2022
  49. aacrjournals.org aacrjournals.org
    Cancer Stem Cells, not Bulk Tumor Cells, Determine Mechanisms of Resistance to SMO Inhibitors
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    aacrjournals.org/cancerrescommun/article/2/6/402/699311/Cancer-Stem-Cells-not-Bulk-Tumor-Cells-Determine
  50. Apr 2022
  51. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Presence of H3K4me3 on Paternally Expressed Genes of the Paternal Genome From Sperm to Implantation
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    ncbi.nlm.nih.gov/pmc/articles/PMC8960379/
  52. Mar 2022
  53. www.sciencedirect.com www.sciencedirect.com
    Single nucleus multi-omics identifies human cortical cell regulatory genome diversity
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    sciencedirect.com/science/article/pii/S2666979X22000271
  54. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Distribution and regulatory roles of oxidized 5-methylcytosines in DNA and RNA of the basidiomycete fungi Laccaria bicolor and Coprinopsis cinerea
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    ncbi.nlm.nih.gov/pmc/articles/PMC8889193/
  55. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Discovery of candidate DNA methylation cancer driver genes
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    ncbi.nlm.nih.gov/pmc/articles/PMC8419066/
  56. Feb 2022
  57. link.springer.com link.springer.com
    When left does not seem right: epigenetic and bioelectric differences between left- and right-sided breast cancer
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    link.springer.com/article/10.1186/s10020-022-00440-5
  58. Sep 2021
  59. www.nature.com www.nature.com
    Multi-platform profiling characterizes molecular subgroups and resistance networks in chronic lymphocytic leukemia
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    nature.com/articles/s41467-021-25403-y
  60. Aug 2021
  61. www.sciencedirect.com www.sciencedirect.com
    Lymphocyte-Specific Chromatin Accessibility Pre-determines Glucocorticoid Resistance in Acute Lymphoblastic Leukemia
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    sciencedirect.com/science/article/pii/S1535610818305233
  62. www.ncbi.nlm.nih.govhttp: www.ncbi.nlm.nih.govhttp:
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    ncbi.nlm.nih.govhttp://europepmc.org/articles/PMC6070528/
  63. Jul 2021
  64. elifesciences.org elifesciences.org
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    elifesciences.org/articles/39380
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    Targeting CDK9 Reactivates Epigenetically Silenced Genes in Cancer
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    sciencedirect.com/science/article/pii/S0092867418312637
  66. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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    Histone H3K9 Methyltransferase G9a in Oocytes Is Essential for Preimplantation Development but Dispensable for CG Methylation Protection
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    sciencedirect.com/science/article/pii/S2211124719303092
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    Widespread Enhancer Dememorization and Promoter Priming during Parental-to-Zygotic Transition
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    sciencedirect.com/science/article/pii/S1097276518308773
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    N6-methyladenine DNA Modification in Glioblastoma
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  70. Jun 2021
  71. www.sciencedirect.com www.sciencedirect.com
    Probing the signaling requirements for naive human pluripotency by high-throughput chemical screening
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    sciencedirect.com/science/article/pii/S2211124721005921
  72. May 2021
  73. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comparison of Global DNA Methylation Patterns in Human Melanoma Tissues and Their Derivative Cell Lines
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    ncbi.nlm.nih.gov/pmc/articles/PMC8124222/
  74. Oct 2020
  75. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Cord blood DNA methylome in newborns later diagnosed with autism spectrum disorder reflects early dysregulation of neurodevelopmental and X-linked genes
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    pubmed.ncbi.nlm.nih.gov/33054850/
  76. Sep 2020
  77. www.sciencedirect.com www.sciencedirect.com
    Regulatory Dynamics of Tet1 and Oct4 Resolve Stages of Global DNA Demethylation and Transcriptomic Changes in Reprogramming
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    sciencedirect.com/science/article/pii/S2211124720300905
  78. Jan 2020
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    Identification and Analyses of Extra-Cranial and Cranial Rhabdoid Tumor Molecular Subgroups Reveal Tumors with Cytotoxic T Cell Infiltration
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    sciencedirect.com/science/article/pii/S2211124719313130
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    TET2 Regulates the Neuroinflammatory Response in Microglia
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    sciencedirect.com/science/article/pii/S2211124719311908
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    A Unique Epigenomic Landscape Defines Human Erythropoiesis
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    sciencedirect.com/science/article/pii/S2211124719310538
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    ncbi.nlm.nih.gov/pmc/articles/PMC6287945/
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    ncbi.nlm.nih.gov/pmc/articles/PMC6456297/
  85. Nov 2018
  86. www.sciencedirect.com www.sciencedirect.com
    Transcription Elongation Can Affect Genome 3D Structure
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    sciencedirect.com/science/article/pii/S0092867418309759
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    nature.com/articles/s41598-018-29993-4
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    Arabidopsis Serrate Coordinates Histone Methyltransferases ATXR5/6 and RNA Processing Factor RDR6 to Regulate Transposon Expression
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    sciencedirect.com/science/article/pii/S1534580718304167
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    Forniceal deep brain stimulation induces gene expression and splicing changes that promote neurogenesis and plasticity
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    ncbi.nlm.nih.gov/pmc/articles/PMC5906096/
  90. academic.oup.com academic.oup.com
    Maser: one-stop platform for NGS big data from analysis to visualization
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    academic.oup.com/database/article/doi/10.1093/database/bay027/4970007
  91. elifesciences.org elifesciences.org
    Integration of human pancreatic islet genomic data refines regulatory mechanisms at Type 2 Diabetes susceptibility loci
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    elifesciences.org/articles/31977
  92. Nov 2017
  93. www.sciencedirect.com www.sciencedirect.com
    The Role of N-α-acetyltransferase 10 Protein in DNA Methylation and Genomic Imprinting
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    sciencedirect.com/science/article/pii/S1097276517306238
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    Simultaneous measurement of chromatin accessibility, DNA methylation, and nucleosome phasing in single cells
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    elifesciences.org/articles/23203
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    Mice deficient of Myc super-enhancer region reveal differential control mechanism between normal and pathological growth
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    ncbi.nlm.nih.gov/pmc/articles/PMC5461110/
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    Using DNA Methylation Profiling to Evaluate Biological Age and Longevity Interventions
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    Single-Cell 5-Formylcytosine Landscapes of Mammalian Early Embryos and ESCs at Single-Base Resolution
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    Epigenetic regulation of lateralized fetal spinal gene expression underlies hemispheric asymmetries
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    elifesciences.org/articles/22784
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    A Biobank of Breast Cancer Explants with Preserved Intra-tumor Heterogeneity to Screen Anticancer Compounds
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    sciencedirect.com/science/article/pii/S0092867416311382