364 Matching Annotations
  1. Last 7 days
  2. www.cell.com www.cell.com
    Variant-to-function analysis of the childhood obesity chr12q13 locus implicates rs7132908 as a causal variant within the 3′ UTR of FAIM2
    1
    1. scibot 02 May 2024
      RRID:SCR_006525

      DOI: 10.1016/j.xgen.2024.100556

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    cell.com/cell-genomics/fulltext/S2666-979X(24)00122-8
  3. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Combined SNPs sequencing and allele specific proteomics capture reveal functional causality underpinning the 2p25 prostate cancer susceptibility locus
    1
    1. scibot 30 Apr 2024
      RRID:SCR_006525

      DOI: 10.21203/rs.3.rs-3943095/v1

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    ncbi.nlm.nih.gov/pmc/articles/PMC11030545/
  4. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic Engineering of Oral Keratinocytes to Establish In Vitro Oral Potentially Malignant Disease Models as a Platform for Treatment Investigation
    1
    1. scibot 29 Apr 2024
      RRID:SCR_006525

      DOI: 10.3390/cells13080710

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    ncbi.nlm.nih.gov/pmc/articles/PMC11049138/
  5. Apr 2024
  6. elifesciences.org elifesciences.org
    Convergent epigenetic evolution drives relapse in acute myeloid leukemia
    1
    1. scibot 24 Apr 2024
      RRID:SCR_006525

      DOI: 10.7554/eLife.93019

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    elifesciences.org/articles/93019
  7. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Enhanced bovine genome annotation through integration of transcriptomics and epi-transcriptomics datasets facilitates genomic biology
    1
    1. scibot 20 Apr 2024
      RRID:SCR_006525

      DOI: 10.1093/gigascience/giae019

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    ncbi.nlm.nih.gov/pmc/articles/PMC11020238/
  8. www.sciencedirect.com www.sciencedirect.com
    No evidence for ac4C within human mRNA upon data reassessment
    1
    1. scibot 19 Apr 2024
      RRID:SCR_006525

      DOI: 10.1016/j.molcel.2024.03.017

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    sciencedirect.com/science/article/pii/S1097276524002272
  9. dx.doi.org dx.doi.org
    Korea4K: whole genome sequences of 4,157 Koreans with 107 phenotypes derived from extensive health check-ups
    1
    1. scibot 18 Apr 2024
      RRID:SCR_006525

      DOI: 10.1093/gigascience/giae014

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    dx.doi.org/10.1093/gigascience/giae014
  10. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Beyond basics: Key mutation selection features for successful tumor-informed ctDNA detection
    1
    1. scibot 17 Apr 2024
      RRID:SCR_006525

      DOI: 10.1002/ijc.34964

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    onlinelibrary.wiley.com/doi/10.1002/ijc.34964
  11. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Sensitive MRD detection from lymphatic fluid after surgery in HPV-associated oropharyngeal cancer
    1
    1. scibot 03 Apr 2024
      RRID:SCR_006525

      DOI: 10.1158/1078-0432.CCR-23-1789

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    ncbi.nlm.nih.gov/pmc/articles/PMC10982646/
  12. Mar 2024
  13. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Epigenetic MLH1 silencing concurs with mismatch repair deficiency in sporadic, naturally occurring colorectal cancer in rhesus macaques
    1
    1. scibot 22 Mar 2024
      RRID:SCR_006525

      DOI: 10.1186/s12967-024-04869-6

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    ncbi.nlm.nih.gov/pmc/articles/PMC10953092/
  14. www.sciencedirect.com www.sciencedirect.com
    Acetyl-CoA carboxylase obstructs CD8+ T cell lipid utilization in the tumor microenvironment
    2
    1. scibot 15 Mar 2024
      RRID:SCR_006525

      DOI: 10.1016/j.cmet.2024.02.009

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    2. scibot 15 Mar 2024
      RRID:SCR_006525

      DOI: 10.1016/j.cmet.2024.02.009

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    sciencedirect.com/science/article/pii/S155041312400055X
  15. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A novel type of monocytic leukemia stem cell revealed by the clinical use of venetoclax-based therapy
    1
    1. scibot 06 Mar 2024
      RRID:SCR_006525

      DOI: 10.1158/2159-8290.CD-22-1297

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    ncbi.nlm.nih.gov/pmc/articles/PMC10527971/
  16. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    INX-315, a selective CDK2 inhibitor, induces cell cycle arrest and senescence in solid tumors
    1
    1. scibot 06 Mar 2024
      RRID:SCR_006525

      DOI: 10.1158/2159-8290.CD-23-0954

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    ncbi.nlm.nih.gov/pmc/articles/PMC10905675/
  17. Feb 2024
  18. 52.53.155.43 52.53.155.43
    delete 3-html.html
    2
    1. scibot 29 Feb 2024
      RRID:SCR_006525

      DOI: 10.1158/1078-0432.ccr-23-1789

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    2. scibot 29 Feb 2024
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      DOI: 10.1158/1078-0432.ccr-23-1789

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    52.53.155.43/40cd9172860f7fe4b8c0548efde0f2836f390f5c/delete 3-html.html
  19. 52.53.155.43 52.53.155.43
    cd-23-0954-html.html
    1
    1. scibot 27 Feb 2024
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      DOI: 10.1158/2159-8290.cd-23-0954

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    52.53.155.43/aaf525c30ae01b53e260240fad732783dfb4bbac/cd-23-0954-html.html
  20. aacrjournals.org aacrjournals.org
    Early Cancer Detection in Li-Fraumeni Syndrome with Cell-Free DNA
    1
    1. scibot 27 Feb 2024
      RRID:SCR_006525

      DOI: 10.1158/2159-8290.CD-23-0456

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    aacrjournals.org/cancerdiscovery/article/14/1/104/732565/Early-Cancer-Detection-in-Li-Fraumeni-Syndrome
  21. 52.53.155.43 52.53.155.43
    can-23-1129-html.html
    1
    1. scibot 23 Feb 2024
      SCR_006525

      DOI: 10.1158/0008-5472.can-23-1129

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  22. www.biorxiv.org www.biorxiv.org
    A Mutation-driven oncofetal regression fuels phenotypic plasticity in colorectal cancer
    1
    1. scibot 09 Feb 2024
      RRID:SCR_006525

      DOI: 10.1101/2023.12.10.570854

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    biorxiv.org/content/10.1101/2023.12.10.570854v1
  23. www.nature.com www.nature.com
    A clinically applicable connectivity signature for glioblastoma includes the tumor network driver CHI3L1
    1
    1. scibot 08 Feb 2024
      RRID:SCR_006525

      DOI: 10.1038/s41467-024-45067-8

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    nature.com/articles/s41467-024-45067-8
  24. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The ncBAF Complex Regulates Transcription in AML Through H3K27ac Sensing by BRD9
    1
    1. scibot 03 Feb 2024
      RRID:SCR_006525

      DOI: 10.1158/2767-9764.CRC-23-0382

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    ncbi.nlm.nih.gov/pmc/articles/PMC10831031/
  25. Jan 2024
  26. www.sciencedirect.com www.sciencedirect.com
    Genetic variants affecting NQO1 protein levels impact the efficacy of idebenone treatment in Leber hereditary optic neuropathy
    1
    1. scibot 25 Jan 2024
      RRID:SCR_006525

      DOI: 10.1016/j.xcrm.2023.101383

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    sciencedirect.com/science/article/pii/S2666379123006122
  27. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Near chromosome-level and highly repetitive genome assembly of the snake pipefish Entelurus aequoreus (Syngnathiformes: Syngnathidae)
    1
    1. scibot 20 Jan 2024
      RRID:SCR_006525

      DOI: 10.46471/gigabyte.105

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    ncbi.nlm.nih.gov/pmc/articles/PMC10795108/
  28. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PRDM3/16 Regulate Chromatin Accessibility Required for NKX2-1 Mediated Alveolar Epithelial Differentiation and Function
    1
    1. scibot 20 Jan 2024
      RRID:SCR_006525

      DOI: 10.1101/2023.12.20.570481

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    ncbi.nlm.nih.gov/pmc/articles/PMC10769259/
  29. elifesciences.org elifesciences.org
    Long-read single-cell sequencing reveals expressions of hypermutation clusters of isoforms in human liver cancer cells
    1
    1. scibot 19 Jan 2024
      RRID:SCR_006525

      DOI: 10.7554/eLife.87607

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    elifesciences.org/articles/87607
  30. aacrjournals.org aacrjournals.org
    Early Cancer Detection in Li-Fraumeni Syndrome with Cell-Free DNA
    1
    1. scibot 18 Jan 2024
      RRID:SCR_006525

      DOI: 10.1158/2159-8290.CD-23-0456

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    aacrjournals.org/cancerdiscovery/article/14/1/104/732565/Early-Cancer-Detection-in-Li-Fraumeni-Syndrome
  31. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Leveraging tissue-specific enhancer-target gene regulatory networks identifies enhancer somatic mutations that functionally impact lung cancer
    1
    1. scibot 05 Jan 2024
      RRID:SCR_006525

      DOI: 10.1158/0008-5472.CAN-23-1129

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    ncbi.nlm.nih.gov/pmc/articles/PMC10758689/
  32. Dec 2023
  33. www.sciencedirect.com www.sciencedirect.com
    Unified framework for patient-derived, tumor-organoid-based predictive testing of standard-of-care therapies in metastatic colorectal cancer
    1
    1. scibot 20 Dec 2023
      RRID:SCR_006525

      DOI: 10.1016/j.xcrm.2023.101335

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    sciencedirect.com/science/article/pii/S2666379123005529
  34. www.sciencedirect.com www.sciencedirect.com
    Integrated multi-omics profiling to dissect the spatiotemporal evolution of metastatic hepatocellular carcinoma
    1
    1. scibot 16 Dec 2023
      RRID:SCR_006525

      DOI: 10.1016/j.ccell.2023.11.010

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    sciencedirect.com/science/article/pii/S1535610823004014
  35. 52.53.155.43 52.53.155.43
    cd-23-0456-html.html
    1
    1. scibot 01 Dec 2023
      RRID:SCR_006525

      DOI: 10.1158/2159-8290.cd-23-0456

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    52.53.155.43/501d9527297007b3e39b0823d0b3cc47e84af461/cd-23-0456-html.html
  36. www.medrxiv.org www.medrxiv.org
    Diverging the anthracycline class of anti-cancer drugs for superior survival of acute myeloid leukemia patients
    1
    1. scibot 01 Dec 2023
      RRID:SCR_006525

      DOI: 10.1101/2023.11.23.23298950

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    medrxiv.org/content/10.1101/2023.11.23.23298950v1
  37. 52.53.155.43 52.53.155.43
    can-23-1129-html.html
    1
    1. scibot 01 Dec 2023
      RRID:SCR_006525

      DOI: 10.1158/0008-5472.can-23-1129

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  38. Nov 2023
  39. www.sciencedirect.com www.sciencedirect.com
    Debugging and consolidating multiple synthetic chromosomes reveals combinatorial genetic interactions
    1
    1. scibot 28 Nov 2023
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      DOI: 10.1016/j.cell.2023.09.025

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    sciencedirect.com/science/article/pii/S0092867423010796
  40. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Colour polymorphism associated with a gene duplication in male wood tiger moths
    1
    1. scibot 15 Nov 2023
      RRID:SCR_006525

      DOI: 10.7554/eLife.80116

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    ncbi.nlm.nih.gov/pmc/articles/PMC10635649/
  41. wellcomeopenresearch.org wellcomeopenresearch.org
    Blimp-1 and c-Maf regulate Il10 and negatively regulate common and unique proinflammatory gene networks in IL-12 plus IL-27-driven T helper-1 cells
    1
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      SCR_006525

      DOI: 10.12688/wellcomeopenres.19680.1

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    wellcomeopenresearch.org/articles/8-403/v1
  42. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Validation of the Clinical Use of GIScar, an Academic-developed Genomic Instability Score Predicting Sensitivity to Maintenance Olaparib for Ovarian Cancer
    2
    1. scibot 03 Nov 2023
      RRID:SCR_006525

      DOI: 10.1158/1078-0432.CCR-23-0898

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    2. scibot 03 Nov 2023
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      DOI: 10.1158/1078-0432.CCR-23-0898

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    ncbi.nlm.nih.gov/pmc/articles/PMC10618649/
  43. www.sciencedirect.com www.sciencedirect.com
    Tissue-specific and tissue-agnostic effects of genome sequence variation modulating blood pressure
    1
    1. scibot 03 Nov 2023
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      DOI: 10.1016/j.celrep.2023.113351

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    sciencedirect.com/science/article/pii/S2211124723013633
  44. www.biorxiv.org www.biorxiv.org
    ZNF397 Loss Triggers TET2-driven Epigenetic Rewiring, Lineage Plasticity, and AR-targeted Therapy Resistance in AR-dependent Cancers
    1
    1. scibot 03 Nov 2023
      RRID:SCR_006525

      DOI: 10.1101/2023.10.24.563645

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    biorxiv.org/content/10.1101/2023.10.24.563645v1
  45. Oct 2023
  46. www.sciencedirect.com www.sciencedirect.com
    Molecular and functional characterization of the Drosophila melanogaster conserved smORFome
    1
    1. scibot 28 Oct 2023
      RRID:SCR_006525

      DOI: 10.1016/j.celrep.2023.113311

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    sciencedirect.com/science/article/pii/S2211124723013232
  47. www.sciencedirect.com www.sciencedirect.com
    Loss of succinyl-CoA synthetase in mouse forebrain results in hypersuccinylation with perturbed neuronal transcription and metabolism
    1
    1. scibot 28 Oct 2023
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      DOI: 10.1016/j.celrep.2023.113241

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    Three-dimensional genome architecture coordinates key regulators of lineage specification in mammary epithelial cells
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    CRISPR-Cas9 for selective targeting of somatic mutations in pancreatic cancers
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  50. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Neoantigen targetability in progressive advanced melanoma
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  51. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Super-enhancer hijacking drives ectopic expression of hedgehog pathway ligands in meningiomas
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  52. 52.53.155.43 52.53.155.43
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  53. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Acquisition of Neural Fate by Combination of BMP Blockade and Chromatin Modification
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  54. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Allele-specific regulatory effects on the pig transcriptome
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  55. Sep 2023
  56. www.sciencedirect.com www.sciencedirect.com
    Distinct pathways of adaptive evolution in Cryptococcus neoformans reveal a mutation in adenylyl cyclase with trade-offs for pathogenicity
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    Integration of eQTL and machine learning to dissect causal genes with pleiotropic effects in genetic regulation networks of seed cotton yield
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  58. Aug 2023
  59. www.biorxiv.org www.biorxiv.org
    Variant-to-function analysis of the childhood obesity chr12q13 locus implicates rs7132908 as a causal variant within the 3’ UTR of FAIM2
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  60. 52.53.155.43 52.53.155.43
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  61. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Distinct mechanisms of mismatch repair deficiency delineate two modes of response to PD-1 immunotherapy in endometrial carcinoma
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  62. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Histone variants shape chromatin states in Arabidopsis
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  63. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Inhibition of DNMT1 methyltransferase activity via glucose-regulated O-GlcNAcylation alters the epigenome
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  64. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Clinical features associated with outcomes and biomarker analysis of dabrafenib plus trametinib treatment in patients with BRAF-mutant melanoma brain metastases
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  65. Jul 2023
  66. www.sciencedirect.com www.sciencedirect.com
    The stability of the myelinating oligodendrocyte transcriptome is regulated by the nuclear lamina
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  67. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A new haplotype-resolved turkey genome to enable turkey genetics and genomics research
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  68. www.sciencedirect.com www.sciencedirect.com
    Title: TET1 Facilitates Specification of Early Human Lineages including Germ Cells
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  69. Jun 2023
  70. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Identification of transcriptional regulatory variants in pig duodenum, liver, and muscle tissues
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  71. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Quantitative trait and transcriptome analysis of genetic complexity underpinning cardiac interatrial septation in mice using an advanced intercross line
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    Nova proteins direct synaptic integration of somatostatin interneurons through activity-dependent alternative splicing
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    An integrated cellular and molecular model of gastric neuroendocrine cancer evolution highlights therapeutic targets
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    An astrocyte BMAL1-BAG3 axis protects against alpha-synuclein and tau pathology
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    A platform for efficient establishment and drug-response profiling of high-grade serous ovarian cancer organoids
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    Multi-omic longitudinal study reveals immune correlates of clinical course among hospitalized COVID-19 patients
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    Disruption of the gut microbiota confers cisplatin resistance in epithelial ovarian cancer
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  78. 52.53.155.43 52.53.155.43
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  79. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Clinical Efficacy and Whole Exome Sequencing of Liquid Biopsies in a Phase IB/II study of Bazedoxifene and Palbociclib in Advanced Hormone Receptor-Positive Breast Cancer
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  80. aacrjournals.org aacrjournals.org
    Enhanced glutaminolysis drives hypoxia-induced chemoresistance in pancreatic cancer
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    5-Azacytidine- and retinoic-acid-induced reprogramming of DCCs into dormancy suppresses metastasis via restored TGF-β-SMAD4 signaling
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    Ferroptosis surveillance independent of GPX4 and differentially regulated by sex hormones
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  83. May 2023
  84. www.biorxiv.org www.biorxiv.org
    A common gene signature of the right ventricle in failing rat and human hearts
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    Prox2 and Runx3 vagal sensory neurons regulate esophageal motility
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  86. www.nature.com www.nature.com
    Germline modifiers of the tumor immune microenvironment implicate drivers of cancer risk and immunotherapy response
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      DOI: 10.1038/s41467-023-38271-5

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  87. onlinelibrary.wiley.com onlinelibrary.wiley.com
    KMT2D Deficiency Promotes Myeloid Leukemias which Is Vulnerable to Ribosome Biogenesis Inhibition
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      DOI: 10.1002/advs.202206098

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  88. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    CHD-associated enhancers shape human cardiomyocyte lineage commitment
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  89. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Multiple germline events contribute to cancer development in patients with Li-Fraumeni syndrome
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      DOI: 10.1158/2767-9764.CRC-22-0402

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  90. Apr 2023
  91. www.sciencedirect.com www.sciencedirect.com
    A hyper-quiescent chromatin state formed during aging is reversed by regeneration
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      DOI: 10.1016/j.molcel.2023.04.005

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    A chromatin-associated regulator of RNA Polymerase III assembly at tRNA genes revealed by locus-specific proteomics
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      DOI: 10.1101/2023.04.17.534528

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    Comprehensive epigenomic profiling reveals the extent of disease-specific chromatin states and informs target discovery in ankylosing spondylitis
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    Genomic profiling of idiopathic peri-hilar cholangiocarcinoma reveals new targets and mutational pathways
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      DOI: 10.1038/s41598-023-33096-0

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  95. www.sciencedirect.com www.sciencedirect.com
    Novel enhancers conferring compensatory transcriptional regulation of Nkx2-5 in heart development
    1
    1. scibot 21 Apr 2023
      RRID:SCR_006525

      DOI: 10.1016/j.isci.2023.106509

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    sciencedirect.com/science/article/pii/S2589004223005862
  96. www.sciencedirect.com www.sciencedirect.com
    INTAC endonuclease and phosphatase modules differentially regulate transcription by RNA polymerase II
    1
    1. scibot 20 Apr 2023
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      DOI: 10.1016/j.molcel.2023.03.022

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    sciencedirect.com/science/article/pii/S1097276523002125
  97. www.sciencedirect.com www.sciencedirect.com
    Complementary gene regulation by NRF1 and NRF2 protects against hepatic cholesterol overload
    1
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      DOI: 10.1016/j.celrep.2023.112399

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  98. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Application of Genomic Sequencing to Refine Patient Stratification for Adjuvant Therapy in Renal Cell Carcinoma
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10068441/
  99. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Lineage-specific differences and regulatory networks governing human chondrocyte development
    1
    1. scibot 09 Apr 2023
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    ncbi.nlm.nih.gov/pmc/articles/PMC10069868/
  100. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Asparagine starvation suppresses histone demethylation through iron depletion
    1
    1. scibot 09 Apr 2023
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    ncbi.nlm.nih.gov/pmc/articles/PMC10074807/
  101. academic.oup.com academic.oup.com
    A chromosome-scale high-contiguity genome assembly of the cheetah (Acinonyx jubatus)
    1
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      DOI: 10.1093/jhered/esad015

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    academic.oup.com/jhered/advance-article/doi/10.1093/jhered/esad015/7069302
  102. Mar 2023
  103. academic.oup.com academic.oup.com
    Resequencing of a Pekin duck breeding population provides insights into the genomic response to short-term artificial selection
    1
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      RRID:SCR_006525

      DOI: 10.1093/gigascience/giad016

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad016/7086661
  104. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the roundjaw bonefish (Albula glossodonta), a vulnerable circumtropical sportfish
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      RRID:SCR_006525

      DOI: 10.46471/gigabyte.44

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    ncbi.nlm.nih.gov/pmc/articles/PMC10038134/
  105. www.sciencedirect.com www.sciencedirect.com
    Stepwise activities of mSWI/SNF family chromatin remodeling complexes direct T cell activation and exhaustion
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    sciencedirect.com/science/article/pii/S1097276523001533
  106. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the deep-sea coral Lophelia pertusa
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  107. www.sciencedirect.com www.sciencedirect.com
    Nicotinamide riboside supplementation is not associated with altered methylation homeostasis in Parkinson’s disease
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    sciencedirect.com/science/article/pii/S2589004223003553
  108. www.sciencedirect.com www.sciencedirect.com
    Transcriptional control of nucleus accumbens neuronal excitability by retinoid X receptor alpha tunes sensitivity to drug rewards
    1
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      DOI: 10.1016/j.neuron.2023.02.013

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    sciencedirect.com/science/article/pii/S0896627323001174
  109. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    S-adenosylmethionine synthases specify distinct H3K4me3 populations and gene expression patterns during heat stress
    1
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      DOI: 10.7554/eLife.79511

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    ncbi.nlm.nih.gov/pmc/articles/PMC9984191/
  110. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Transcriptomic and epigenomic analyses revealed that polycomb repressive complex 2 regulates not only developmental but also stress responsive metabolism in Brassica rapa
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9986605/
  111. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Integrated, Longitudinal Analysis of Cell-free DNA in Uveal Melanoma
    1
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      DOI: 10.1158/2767-9764.CRC-22-0456

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    ncbi.nlm.nih.gov/pmc/articles/PMC9973415/
  112. www.sciencedirect.com www.sciencedirect.com
    A cell-type-specific alternative splicing regulator shapes synapse properties in a trans-synaptic manner
    1
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      DOI: 10.1016/j.celrep.2023.112173

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    sciencedirect.com/science/article/pii/S2211124723001845
  113. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic Resources for the North American Water Vole (Microtus richardsoni) and the Montane Vole (Microtus montanus)
    1
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      RRID:SCR_006525

      DOI: 10.46471/gigabyte.19

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    ncbi.nlm.nih.gov/pmc/articles/PMC9631978/
  114. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A genome assembly of the Atlantic chub mackerel (Scomber colias): a valuable teleost fishing resource
    1
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      DOI: 10.46471/gigabyte.40

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650269/
  115. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality draft genome for Melaleuca alternifolia (tea tree): a new platform for evolutionary genomics of myrtaceous terpene-rich species
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      DOI: 10.46471/gigabyte.28

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650293/
  116. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genome of a giant (trevally): Caranx ignobilis
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    1. scibot 02 Mar 2023
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    ncbi.nlm.nih.gov/pmc/articles/PMC9694125/
  117. Feb 2023
  118. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comprehensive genomic profiling of upper tract urothelial carcinoma and urothelial carcinoma of the bladder identifies distinct molecular characterizations with potential implications for targeted therapy & immunotherapy
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    1. scibot 23 Feb 2023
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      DOI: 10.3389/fimmu.2022.1097730

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    ncbi.nlm.nih.gov/pmc/articles/PMC9936149/
  119. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    NPAS4 in the medial prefrontal cortex mediates chronic social defeat stress-induced anhedonia-like behavior and reductions in excitatory synapses
    1
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      DOI: 10.7554/eLife.75631

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  120. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome-wide epigenetic and mRNA-expression profiling followed by CRISPR/Cas9-mediated gene-disruptions corroborate the MIR141/MIR200C-ZEB1/ZEB2-FGFR1 axis in acquired EMT-associated EGFR TKI-resistance in NSCLC cells
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      DOI: 10.21037/tlcr-22-507

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  121. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Integrated Genomic Analysis Identifies UBTF Tandem Duplications as a Recurrent Lesion in Pediatric Acute Myeloid Leukemia
    1
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      DOI: 10.1158/2643-3230.BCD-21-0160

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  122. Jan 2023
  123. www.nature.com www.nature.com
    Germline rare deleterious variant load alters cancer risk, age of onset and tumor characteristics
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      DOI: 10.1038/s41698-023-00354-3

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    nature.com/articles/s41698-023-00354-3
  124. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Cancer stem cells, not bulk tumor cells, determine mechanisms of resistance to SMO inhibitors
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      DOI: 10.1158/2767-9764.crc-22-0124

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    ncbi.nlm.nih.gov/pmc/articles/PMC9853917/
  125. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Human Papillomavirus 42 Drives Digital Papillary Adenocarcinoma and Elicits a Germ Cell–like Program Conserved in HPV-Positive Cancers
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      DOI: 10.1158/2159-8290.CD-22-0489

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  126. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The Novel Nucleoside Analogue ProTide NUC-7738 Overcomes Cancer Resistance Mechanisms In Vitro and in a First-In-Human Phase I Clinical Trial
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  127. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Circulating Tumor DNA in Stage III Colorectal Cancer, beyond Minimal Residual Disease Detection, toward Assessment of Adjuvant Therapy Efficacy and Clinical Behavior of Recurrences
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      DOI: 10.1158/1078-0432.CCR-21-2404

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  128. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Vaccination with Designed Neopeptides Induces Intratumoral, Cross-reactive CD4+ T-cell Responses in Glioblastoma
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      DOI: 10.1158/1078-0432.CCR-22-1741

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  129. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PRC2 Inactivating Mutations in Cancer Enhance Cytotoxic Response to DNMT1 Targeted Therapy via Enhanced Viral Mimicry
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      DOI: 10.1158/2159-8290.CD-21-1671

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    ncbi.nlm.nih.gov/pmc/articles/PMC9437570/
  130. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comparative Genomics Provides Etiologic and Biological Insight into Melanoma Subtypes
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      DOI: 10.1158/2159-8290.CD-22-0603

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  131. 52.53.155.43 52.53.155.43
    An integrated SAGA and TFIID PIC assembly pathway selective for poised and induced promoters.
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      DOI: 10.1101/gad.350026.122

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    52.53.155.43/559289c6916b0e2685cb28267e4160aeae97af13/Genes Dev.-2022-Mittal-985-1001-html.html
  132. Dec 2022
  133. www.sciencedirect.com www.sciencedirect.com
    Protocol to analyze population structure and migration history based on human genome variation data
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      DOI: 10.1016/j.xpro.2022.101928

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  134. elifesciences.org elifesciences.org
    Oncogene expression from extrachromosomal DNA is driven by copy number amplification and does not require spatial clustering in glioblastoma stem cells
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      DOI: 10.7554/eLife.80207

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  135. 52.53.155.43 52.53.155.43
    can-22-0455-html.html
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      DOI: 10.1158/0008-5472.CAN-22-0455

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  136. Nov 2022
  137. aacrjournals.org aacrjournals.org
    Transcriptomic Correlates of Tumor Cell PD-L1 Expression and Response to Nivolumab Monotherapy in Metastatic Clear Cell Renal Cell Carcinoma
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      DOI: 10.1158/1078-0432.CCR-22-0923

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    aacrjournals.org/clincancerres/article/28/18/4045/708991/Transcriptomic-Correlates-of-Tumor-Cell-PD-L1
  138. www.sciencedirect.com www.sciencedirect.com
    Reconstructing mutational lineages in breast cancer by multi-patient-targeted single-cell DNA sequencing
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      DOI: 10.1016/j.xgen.2022.100215

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  139. academic.oup.com academic.oup.com
    Selection signatures in goats reveal a novel deletion mutant underlying cashmere yield and diameter
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      DOI: 10.1093/gigascience/giac107

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  140. www.sciencedirect.com www.sciencedirect.com
    A single-cell transcriptome atlas of glial diversity in the human hippocampus across the postnatal lifespan
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    1. scibot 04 Nov 2022
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      DOI: 10.1016/j.stem.2022.09.010

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  141. Oct 2022
  142. elifesciences.org elifesciences.org
    Little skate genome provides insights into genetic programs essential for limb-based locomotion
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      DOI: 10.7554/eLife.78345

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  143. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    STAG2 expression is associated with adverse survival outcomes and regulates cell phenotype in muscle-invasive bladder cancer
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  144. www.sciencedirect.com www.sciencedirect.com
    A cis-regulatory lexicon of DNA motif combinations mediating cell-type-specific gene regulation
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      DOI: 10.1016/j.xgen.2022.100191

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    sciencedirect.com/science/article/pii/S2666979X22001409
  145. Sep 2022
  146. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    STAG2 promotes the myelination transcriptional program in oligodendrocytes
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  147. link.springer.com link.springer.com
    Correction to: Hepatitis, testicular degeneration, and ataxia in DIDO3-deficient mice with altered mRNA processing
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      DOI: 10.1186/s13578-022-00843-1

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  148. www.sciencedirect.com www.sciencedirect.com
    Sublethal cytochrome c release generates drug-tolerant persister cells
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  149. Aug 2022
  150. www.sciencedirect.com www.sciencedirect.com
    SMNDC1 links chromatin remodeling and splicing to regulate pancreatic hormone expression
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  151. 52.53.155.43 52.53.155.43
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  152. www.sciencedirect.com www.sciencedirect.com
    TOP1 CAD-seq: A protocol to map catalytically engaged topoisomerase 1 in human cells
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      DOI: 10.1016/j.xpro.2022.101581

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  153. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A limit on the evolutionary rescue of an Antarctic bacterium from rising temperatures
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      DOI: 10.1126/sciadv.abk3511

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  154. Jul 2022
  155. 52.53.155.43 52.53.155.43
    A chromosome-scale genome assembly of the okapi (Okapia johnstoni)
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      DOI: 10.1093/jhered/esac033

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  156. www.science.org www.science.org
    A limit on the evolutionary rescue of an Antarctic bacterium from rising temperatures
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      DOI: 10.1126/sciadv.abk3511

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  157. www.researchsquare.com www.researchsquare.com
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  158. www.sciencedirect.com www.sciencedirect.com
    Volatile profiles of commercial vetch prepared via different processing methods
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  159. Jun 2022
  160. aacrjournals.org aacrjournals.org
    Cancer Stem Cells, not Bulk Tumor Cells, Determine Mechanisms of Resistance to SMO Inhibitors
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    aacrjournals.org/cancerrescommun/article/2/6/402/699311/Cancer-Stem-Cells-not-Bulk-Tumor-Cells-Determine
  161. aacrjournals.org aacrjournals.org
    Predictive markers of response to neoadjuvant durvalumab with nab-paclitaxel and dose dense doxorubicin/cyclophosphamide in basal-like triple negative breast cancer
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    aacrjournals.org/clincancerres/article/28/12/2587/699273/Predictive-Markers-of-Response-to-Neoadjuvant
  162. elifesciences.org elifesciences.org
    Dnmt3a knockout in excitatory neurons impairs postnatal synapse maturation and increases the repressive histone modification H3K27me3
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      DOI: 10.7554/eLife.66909

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  163. www.sciencedirect.com www.sciencedirect.com
    EED is required for mouse primordial germ cell differentiation in the embryonic gonad
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  164. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A Humanized Animal Model Predicts Clonal Evolution and Therapeutic Vulnerabilities in Myeloproliferative Neoplasms
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  165. May 2022
  166. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    VE-cadherin enables trophoblast endovascular invasion and spiral artery remodeling during placental development
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      DOI: 10.7554/eLife.77241

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  167. gigabytejournal.com gigabytejournal.com
    LT1, an ONT long-read-based assembly scaffolded with Hi-C data and polished with short reads
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      DOI: 10.46471/gigabyte.51

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  168. aacrjournals.org aacrjournals.org
    A Phenogenetic Axis that Modulates Clinical Manifestation and Predicts Treatment Outcome in Primary Myeloid NeoplasmsLandscape of Myeloid Neoplasms in a Chinese Cohort
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      DOI: 10.1158/2767-9764.CRC-21-0194

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  169. Apr 2022
  170. www.sciencedirect.com www.sciencedirect.com
    RPAP2 regulates a transcription initiation checkpoint by inhibiting assembly of pre-initiation complex
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  171. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    AP-2α and AP-2β cooperatively function in the craniofacial surface ectoderm to regulate chromatin and gene expression dynamics during facial development
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      DOI: 10.7554/eLife.70511

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  172. link.springer.com link.springer.com
    Four novel mutations in the androgen receptor gene from Vietnamese patients with androgen insensitivity syndrome
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      DOI: 10.1007/s13258-022-01249-6

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  173. aacrjournals.org aacrjournals.org
    Bone marrow surveillance of pediatric cancer survivors identifies clones that predict therapy-related leukemia
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      DOI: 10.1158/1078-0432.CCR-21-2451

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    aacrjournals.org/clincancerres/article/28/8/1614/694144/Bone-Marrow-Surveillance-of-Pediatric-Cancer
  174. www.sciencedirect.com www.sciencedirect.com
    HNF4A modulates glucocorticoid action in the liver
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  175. www.sciencedirect.com www.sciencedirect.com
    A chromosome-level genome of the human blood fluke Schistosoma japonicum identifies the genomic basis of host-switching
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      DOI: 10.1016/j.celrep.2022.110638

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  176. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome of the globe skimmer dragonfly (Pantala flavescens)
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      DOI: 10.1093/gigascience/giac009

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  177. aacrjournals.org aacrjournals.org
    MUC1-C Dictates JUN and BAF-mediated Chromatin Remodeling at Enhancer Signatures in Cancer Stem Cells
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      DOI: 10.1158/1541-7786.MCR-21-0672

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  178. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Presence of H3K4me3 on Paternally Expressed Genes of the Paternal Genome From Sperm to Implantation
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      DOI: 10.3389/fcell.2022.838684

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  179. Mar 2022
  180. elifesciences.org elifesciences.org
    Novel insights from a multiomics dissection of the Hayflick limit
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      DOI: 10.7554/eLife.70283

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  181. elifesciences.org elifesciences.org
    A genetic compensatory mechanism regulated by Jun and Mef2d modulates the expression of distinct class IIa Hdacs to ensure peripheral nerve myelination and repair
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      DOI: 10.7554/eLife.72917

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  182. Feb 2022
  183. www.sciencedirect.com www.sciencedirect.com
    EBF1 nuclear repositioning instructs chromatin refolding to promote therapy resistance in T leukemic cells
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      DOI: 10.1016/j.molcel.2022.01.015

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  184. www.sciencedirect.com www.sciencedirect.com
    Simultaneous cellular and molecular phenotyping of embryonic mutants using single-cell regulatory trajectories
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      DOI: 10.1016/j.devcel.2022.01.016

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  185. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Single-cell analysis of human glioma and immune cells identifies S100A4 as an immunotherapy target
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      DOI: 10.1038/s41467-022-28372-y

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  186. Jan 2022
  187. www.sciencedirect.com www.sciencedirect.com
    Construction of Strand-seq libraries in open nanoliter arrays
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      DOI: 10.1016/j.crmeth.2021.100150

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  188. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Novel variants underlying autosomal recessive neurodevelopmental disorders with intellectual disability in Iranian consanguineous families
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    onlinelibrary.wiley.com/doi/full/10.1002/jcla.24241
  189. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PRC1 sustains the integrity of neural fate in the absence of PRC2 function
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      DOI: 10.7554/eLife.72769

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  190. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Enhancer RNA Expression in Response to Glucocorticoid Treatment in Murine Macrophages
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      DOI: 10.3390/cells11010028

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  191. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    MAP3K7 loss drives enhanced androgen signaling and independently confers risk of recurrence in prostate cancer with joint loss of CHD1
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  192. Dec 2021
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    Stage-stratified molecular profiling of non-muscle-invasive bladder cancer enhances biological, clinical, and therapeutic insight
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    ARID4B is critical for mouse embryonic stem cell differentiation towards mesoderm and endoderm, linking epigenetics to pluripotency exit
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    MYC assembles and stimulates topoisomerases 1 and 2 in a “topoisome”
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    Highly accurate whole-genome imputation of SARS-CoV-2 from partial or low-quality sequences
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    Topoisomerase 1 activity during mitotic transcription favors the transition from mitosis to G1
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    Sequence features of retrotransposons allow for epigenetic variability
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  200. Oct 2021
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    PIWI-mediated control of tissue-specific transposons is essential for somatic cell differentiation
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    Global chromatin relabeling accompanies spatial inversion of chromatin in rod photoreceptors
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    Prediction of Immunotherapy Response in Melanoma through Combined Modeling of Neoantigen Burden and Immune-Related Resistance Mechanisms
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  207. Sep 2021
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    Leveraging the Mendelian disorders of the epigenetic machinery to systematically map functional epigenetic variation
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    SPT5 stabilizes RNA polymerase II, orchestrates transcription cycles, and maintains the enhancer landscape
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  210. Aug 2021
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    Structural Remodeling of the Human Colonic Mesenchyme in Inflammatory Bowel Disease
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  220. Jul 2021
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    Identification of Betamethasone-Regulated Target Genes and Cell Pathways in Fetal Rat Lung Mesenchymal Fibroblasts
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    RNA Polymerase II CTD Tyrosine 1 Is Required for Efficient Termination by the Nrd1-Nab3-Sen1 Pathway
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  231. currentprotocols.onlinelibrary.wiley.com currentprotocols.onlinelibrary.wiley.com
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