432 Matching Annotations
  1. Apr 2024
  2. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    STAT3 couples activated tyrosine kinase signaling to the oncogenic core transcriptional regulatory circuitry of anaplastic large cell lymphoma
    1
    1. scibot 03 Apr 2024
      SCR_006646

      DOI: 10.1016/j.xcrm.2024.101472

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10983107/
  3. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Select EZH2 inhibitors enhance viral mimicry effects of DNMT inhibition through a mechanism involving NFAT:AP-1 signaling
    1
    1. scibot 03 Apr 2024
      RRID:SCR_006646

      DOI: 10.1126/sciadv.adk4423

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10971413/
  4. Mar 2024
  5. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Deciphering the spatiotemporal transcriptional and chromatin accessibility of human retinal organoid development at the single-cell level
    1
    1. scibot 22 Mar 2024
      RRID:SCR_006646

      DOI: 10.1016/j.isci.2024.109397

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10952046/
  6. link.springer.com link.springer.com
    From degraded to deciphered: ATAC-seq’s application potential in forensic diagnosis
    1
    1. scibot 19 Mar 2024
      RRID:SCR_006646

      DOI: 10.1007/s00414-024-03206-2

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    link.springer.com/article/10.1007/s00414-024-03206-2
  7. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    An improved chromosome-level genome assembly of perennial ryegrass (Lolium perenne L.)
    1
    1. scibot 19 Mar 2024
      RRID:SCR_006646

      DOI: 10.46471/gigabyte.112

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10940895/
  8. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A Cluster of Evolutionarily Recent KRAB Zinc Finger Proteins Protects Cancer Cells from Replicative Stress-Induced Inflammation
    1
    1. scibot 17 Mar 2024
      RRID:SCR_006646

      DOI: 10.1158/0008-5472.CAN-23-1237

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10940857/
  9. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    DNA methylation-environment interactions in the human genome
    1
    1. scibot 17 Mar 2024
      RRID:SCR_006646

      DOI: 10.7554/eLife.89371

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10942648/
  10. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    C17orf80 binds the mitochondrial genome to promote its replication
    1
    1. scibot 10 Mar 2024
      RRID:SCR_006646

      DOI: 10.1083/jcb.202302037

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10484793/
  11. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    INX-315, a selective CDK2 inhibitor, induces cell cycle arrest and senescence in solid tumors
    1
    1. scibot 06 Mar 2024
      RRID:SCR_006646

      DOI: 10.1158/2159-8290.CD-23-0954

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10905675/
  12. Feb 2024
  13. 52.53.155.43 52.53.155.43
    cd-23-0954-html.html
    1
    1. scibot 27 Feb 2024
      RRID:SCR_006646

      DOI: 10.1158/2159-8290.cd-23-0954

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    52.53.155.43/aaf525c30ae01b53e260240fad732783dfb4bbac/cd-23-0954-html.html
  14. www.biorxiv.org www.biorxiv.org
    A Mutation-driven oncofetal regression fuels phenotypic plasticity in colorectal cancer
    1
    1. scibot 09 Feb 2024
      RRID:SCR_006646

      DOI: 10.1101/2023.12.10.570854

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2023.12.10.570854v1
  15. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Parkinson’s Disease Risk Enhancers in Microglia
    1
    1. scibot 08 Feb 2024
      RRID:SCR_006646

      DOI: 10.1016/j.isci.2024.108921

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10845915/
  16. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genetic background variation impacts microglial heterogeneity and disease progression in amyotrophic lateral sclerosis model mice
    1
    1. scibot 08 Feb 2024
      RRID:SCR_006646

      DOI: 10.1016/j.isci.2024.108872

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10839647/
  17. www.biorxiv.org www.biorxiv.org
    Mapping chromatin state and transcriptional response in CIC-DUX4 undifferentiated round cell sarcoma
    1
    1. scibot 04 Feb 2024
      RRID:SCR_006646

      DOI: 10.1101/2023.10.11.561932

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2023.10.11.561932v1
  18. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome-wide p63-target gene analyses reveal TAp63/NRF2-dependent oxidative stress responses
    1
    1. scibot 03 Feb 2024
      RRID:SCR_006646

      DOI: 10.1158/2767-9764.CRC-23-0358

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10832605/
  19. www.sciencedirect.com www.sciencedirect.com
    SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway
    1
    1. scibot 02 Feb 2024
      RRID:SCR_006646

      DOI: 10.1016/j.canlet.2024.216667

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S0304383524000612
  20. www.sciencedirect.com www.sciencedirect.com
    Ancestral genome reconstruction enhances transposable element annotation by identifying degenerate integrants
    1
    1. scibot 02 Feb 2024
      RRID:SCR_006646

      DOI: 10.1016/j.xgen.2024.100497

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2666979X24000247
  21. www.sciencedirect.com www.sciencedirect.com
    Development of sexual dimorphism of skeletal muscles through the adrenal cortex, caused by androgen-induced global gene suppression
    2
    1. scibot 02 Feb 2024
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2024.113715

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    2. scibot 02 Feb 2024
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2024.113715

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2211124724000433
  22. www.sciencedirect.com www.sciencedirect.com
    PUF partner interactions at a conserved interface shape the RNA-binding landscape and cell fate in Caenorhabditis elegans
    1
    1. scibot 02 Feb 2024
      RRID:SCR_006646

      DOI: 10.1016/j.devcel.2024.01.005

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1534580724000054
  23. Jan 2024
  24. www.nature.com www.nature.com
    Cell-type-directed design of synthetic enhancers
    1
    1. scibot 25 Jan 2024
      RRID:SCR_006646

      DOI: 10.1038/s41586-023-06936-2

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41586-023-06936-2
  25. www.sciencedirect.com www.sciencedirect.com
    5-Hydroxymethylcytosine signals in serum are a predictor of chemoresistance in high-grade serous ovarian cancer
    1
    1. scibot 25 Jan 2024
      RRID:SCR_006646

      DOI: 10.1016/j.ygyno.2024.01.001

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S0090825824000015
  26. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Glucose Deprivation Promotes Pseudohypoxia and Dedifferentiation in Lung Adenocarcinoma
    1
    1. scibot 20 Jan 2024
      RRID:SCR_006646

      DOI: 10.1158/0008-5472.CAN-23-1148

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10790128/
  27. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PRDM3/16 Regulate Chromatin Accessibility Required for NKX2-1 Mediated Alveolar Epithelial Differentiation and Function
    1
    1. scibot 20 Jan 2024
      RRID:SCR_006646

      DOI: 10.1101/2023.12.20.570481

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10769259/
  28. www.sciencedirect.com www.sciencedirect.com
    Cell-free DNA fragmentomics and second malignant neoplasm risk in patients with PTEN hamartoma tumor syndrome
    1
    1. scibot 19 Jan 2024
      RRID:SCR_006646

      DOI: 10.1016/j.xcrm.2023.101384

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2666379123006134
  29. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    β-catenin-driven differentiation is a tissue-specific epigenetic vulnerability in adrenal cancer
    1
    1. scibot 10 Jan 2024
      RRID:SCR_006646

      DOI: 10.1158/0008-5472.CAN-22-2712

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10330305/
  30. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Multi-omics integration identifies cell-state-specific repression by PBRM1-PIAS1 cooperation
    1
    1. scibot 06 Jan 2024
      RRID: SCR_006646

      DOI: 10.1016/j.xgen.2023.100471

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @evieth

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10794847/
  31. Dec 2023
  32. www.sciencedirect.com www.sciencedirect.com
    SARS-CoV-2 RNA stabilizes host mRNAs to elicit immunopathogenesis
    1
    1. scibot 22 Dec 2023
      RRID:SCR_006646

      DOI: 10.1016/j.molcel.2023.11.032

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1097276523009784
  33. www.sciencedirect.com www.sciencedirect.com
    Pluripotency state transition of embryonic stem cells requires the turnover of histone chaperone FACT on chromatin
    1
    1. scibot 21 Dec 2023
      SCR_006646

      DOI: 10.1016/j.isci.2023.108537

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2589004223026147
  34. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality pseudo-phased genome for Melaleuca quinquenervia shows allelic diversity of NLR-type resistance genes
    1
    1. scibot 16 Dec 2023
      RRID:SCR_006646

      DOI: 10.1093/gigascience/giad102

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10720953/
  35. www.science.org www.science.org
    A single-cell multi-omic atlas spanning the adult rhesus macaque brain
    1
    1. scibot 09 Dec 2023
      RRID:SCR_006646

      DOI: 10.1126/sciadv.adh1914

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/doi/10.1126/sciadv.adh1914
  36. Nov 2023
  37. www.sciencedirect.com www.sciencedirect.com
    Debugging and consolidating multiple synthetic chromosomes reveals combinatorial genetic interactions
    1
    1. scibot 28 Nov 2023
      RRID:SCR_006646

      DOI: 10.1016/j.cell.2023.09.025

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S0092867423010796
  38. 52.53.155.43 52.53.155.43
    schall-latham-2023-predictive-modeling-of-oocyte-maternal-mrna-features-of-five-mammalian-species-reveals-potential (1)-html.html
    1
    1. scibot 18 Nov 2023
      RRID:SCR_006646

      DOI: 10.6084/m9.figshare.22674448.v1

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    52.53.155.43/b38c22d2b0c9591d1f12b114a1f97bc735ea3c68/schall-latham-2023-predictive-modeling-of-oocyte-maternal-mrna-features-of-five-mammalian-species-reveals-potential (1)-html.html
  39. www.science.org www.science.org
    LINE-1 retrotransposons drive human neuronal transcriptome complexity and functional diversification
    1
    1. scibot 17 Nov 2023
      RRID:SCR_006646

      DOI: 10.1126/sciadv.adh9543

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/doi/10.1126/sciadv.adh9543
  40. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Divergence of TORC1-mediated stress response leads to novel acquired stress resistance in a pathogenic yeast
    1
    1. scibot 09 Nov 2023
      RRID:SCR_006646

      DOI: 10.1371/journal.ppat.1011748

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10621968/
  41. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    In Vivo Screening Unveils Pervasive RNA-Binding Protein Dependencies in Leukemic Stem Cells and Identifies ELAVL1 as a Therapeutic Target
    2
    1. scibot 03 Nov 2023
      RRID:SCR_006646

      DOI: 10.1158/2643-3230.BCD-22-0086

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    2. scibot 03 Nov 2023
      RRID:SCR_006646

      DOI: 10.1158/2643-3230.BCD-22-0086

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10150294/
  42. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    LINE-1 retrotransposons drive human neuronal transcriptome complexity and functional diversification
    1
    1. scibot 03 Nov 2023
      RRID:SCR_006646

      DOI: 10.1126/sciadv.adh9543

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10619931/
  43. www.sciencedirect.com www.sciencedirect.com
    Tissue-specific and tissue-agnostic effects of genome sequence variation modulating blood pressure
    1
    1. scibot 03 Nov 2023
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2023.113351

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2211124723013633
  44. www.sciencedirect.com www.sciencedirect.com
    Active maintenance of CD8+ T cell naivety through regulation of global genome architecture
    1
    1. scibot 02 Nov 2023
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2023.113301

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S221112472301313X
  45. Oct 2023
  46. www.sciencedirect.com www.sciencedirect.com
    Three-dimensional genome architecture coordinates key regulators of lineage specification in mammary epithelial cells
    1
    1. scibot 27 Oct 2023
      RRID:SCR_006646

      DOI: 10.1016/j.xgen.2023.100424

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2666979X23002501
  47. www.biorxiv.org www.biorxiv.org
    Chondrodysplasia-inducing COL2A1 p.Gly1170Ser causes an ER storage defect without associated unfolded protein response in a human cartilage model
    1
    1. scibot 27 Oct 2023
      RRID:SCR_006646

      DOI: 10.1101/2023.10.19.562780

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2023.10.19.562780v3
  48. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    nf-core/clipseq - a robust Nextflow pipeline for comprehensive CLIP data analysis
    1
    1. scibot 14 Oct 2023
      RRID:SCR_006646

      DOI: 10.12688/wellcomeopenres.19453.1

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10565428/
  49. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A single-cell multi-omic atlas spanning the adult rhesus macaque brain
    1
    1. scibot 14 Oct 2023
      RRID:SCR_006646

      DOI: 10.1126/sciadv.adh1914

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10569716/
  50. www.nature.com www.nature.com
    TET2 lesions enhance the aggressiveness of CEBPA-mutant acute myeloid leukemia by rebalancing GATA2 expression
    1
    1. scibot 06 Oct 2023
      RRID:SCR_006646

      DOI: 10.1038/s41467-023-41927-x

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41467-023-41927-x
  51. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Acquisition of Neural Fate by Combination of BMP Blockade and Chromatin Modification
    1
    1. scibot 06 Oct 2023
      RRID:SCR_006646

      DOI: 10.1016/j.isci.2023.107887

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10522999/
  52. Sep 2023
  53. 52.53.155.43 52.53.155.43
    jkad214-html.html
    1
    1. scibot 29 Sep 2023
      RRID:SCR_006646

      DOI: 10.1093/g3journal/jkad214

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    52.53.155.43/3d9dadcff91e2baad90f130c0ca8d0eaf7826014/jkad214-html.html
  54. www.sciencedirect.com www.sciencedirect.com
    A bipartite function of ESRRB can integrate signaling over time to balance self-renewal and differentiation
    1
    1. scibot 27 Sep 2023
      RRID:SCR_006646

      DOI: 10.1016/j.cels.2023.07.008

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2405471223002156
  55. Aug 2023
  56. www.sciencedirect.com www.sciencedirect.com
    The SMC5/6 complex compacts and silences unintegrated HIV-1 DNA and is antagonized by Vpr
    1
    1. scibot 20 Aug 2023
      RRID:SCR_006646

      DOI: 10.1016/j.chom.2021.03.001

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @Naa003

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646 RRIDCUR:Validated
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1931312821001013
  57. 52.53.155.43 52.53.155.43
    Aberrant accumulation of Kras-dependent pervasive transcripts during tumor progression renders cancer cells dependent on PAF1 expression
    2
    1. scibot 16 Aug 2023
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2023.112979

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    2. scibot 16 Aug 2023
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2023.112979

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    52.53.155.43/491f3628ae56ca418965e7c0fc6856d1761b345d/PIIS2211124723009907-html.html
  58. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Deficiency of the Polycomb protein RYBP and TET methylcytosine oxidases promotes extensive CpG island hypermethylation and malignant transformation
    1
    1. scibot 03 Aug 2023
      RRID:SCR_006646

      DOI: 10.1158/0008-5472.CAN-23-0269

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10391329/
  59. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Inhibition of DNMT1 methyltransferase activity via glucose-regulated O-GlcNAcylation alters the epigenome
    1
    1. scibot 02 Aug 2023
      RRID:SCR_006646

      DOI: 10.7554/eLife.85595

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10390045/
  60. Jul 2023
  61. www.sciencedirect.com www.sciencedirect.com
    The stability of the myelinating oligodendrocyte transcriptome is regulated by the nuclear lamina
    1
    1. scibot 29 Jul 2023
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2023.112848

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2211124723008598
  62. www.sciencedirect.com www.sciencedirect.com
    CRIC-seq protocol for in situ profiling of proximal RNA-RNA contacts associated with RNA-binding proteins
    1
    1. scibot 08 Jul 2023
      RRID:SCR_006646

      DOI: 10.1016/j.xpro.2023.102401

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2666166723003684
  63. 52.53.155.43 52.53.155.43
    can-23-0269-html.html
    1
    1. scibot 08 Jul 2023
      RRID:SCR_006646

      DOI: 10.1158/0008-5472.can-23-0269

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    52.53.155.43/54e62d316063b1626eedcc4063c6657fd4e230c9/can-23-0269-html.html
  64. www.sciencedirect.com www.sciencedirect.com
    Metabolic regulation of CTCF expression and chromatin association dictates starvation response in mice and flies
    1
    1. scibot 01 Jul 2023
      RRID:SCR_006646

      DOI: 10.1016/j.isci.2023.107128

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2589004223012051
  65. Jun 2023
  66. 52.53.155.43 52.53.155.43
    can-22-2712-html.html
    1
    1. scibot 29 Jun 2023
      RRID:SCR_006646

      DOI: 10.1158/0008-5472.CAN-22-2712

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    52.53.155.43/726555d37fadfa1ef429cf94df3437d3f13c8b94/can-22-2712-html.html
  67. www.biorxiv.org www.biorxiv.org
    Divergence of TORC1-mediated Stress Response Leads to Novel Acquired Stress Resistance in a Pathogenic Yeast
    1
    1. scibot 26 Jun 2023
      RRID:SCR_006646

      DOI: 10.1101/2023.06.20.545716

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2023.06.20.545716v1
  68. www.embopress.org www.embopress.org
    DOT1L bridges transcription and heterochromatin formation at mammalian pericentromeres
    1
    1. scibot 22 Jun 2023
      RRID:SCR_006646

      DOI: 10.15252/embr.202256492

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    embopress.org/doi/10.15252/embr.202256492
  69. dx.doi.org dx.doi.org
    FOXA1 reprogramming dictates retinoid X receptor response in ESR1 mutant breast cancer
    1
    1. scibot 10 Jun 2023
      RRID:SCR_006646

      DOI: 10.1158/1541-7786.MCR-22-0516

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    dx.doi.org/10.1158/1541-7786.MCR-22-0516
  70. May 2023
  71. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Evolution of Resistance to Irinotecan in Cancer Cells Involves Generation of Topoisomerase-Guided Mutations in Non-Coding Genome That Reduce the Chances of DNA Breaks
    1
    1. scibot 31 May 2023
      RRID:SCR_006646

      DOI: 10.3390/ijms24108717

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10218574/
  72. www.biorxiv.org www.biorxiv.org
    Transition from Transient DNA Rereplication to Inherited Gene Amplification Following Prolonged Environmental Stress
    1
    1. scibot 18 May 2023
      RRID:SCR_006646

      DOI: 10.1101/2023.05.08.539886

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2023.05.08.539886v1
  73. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Generating minimum set of gRNA to cover multiple targets in multiple genomes with MINORg
    1
    1. scibot 09 May 2023
      RRID:SCR_006646

      DOI: 10.1093/nar/gkad142

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10164578/
  74. www.biorxiv.org www.biorxiv.org
    L1 retrotransposons drive human neuronal transcriptome complexity and functional diversification
    1
    1. scibot 04 May 2023
      RRID:SCR_006646

      DOI: 10.1101/2023.03.04.531072

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2023.03.04.531072v1
  75. www.sciencedirect.com www.sciencedirect.com
    Functional interplay between Mediator and RSC chromatin remodeling complex controls nucleosome-depleted region maintenance at promoters
    1
    1. scibot 03 May 2023
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2023.112465

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S221112472300476X
  76. Apr 2023
  77. www.sciencedirect.com www.sciencedirect.com
    A hyper-quiescent chromatin state formed during aging is reversed by regeneration
    1
    1. scibot 29 Apr 2023
      RRID:SCR_006646

      DOI: 10.1016/j.molcel.2023.04.005

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1097276523002496
  78. www.sciencedirect.com www.sciencedirect.com
    Maternal and food microbial sources shape the infant microbiome of a rural Ethiopian population
    1
    1. scibot 29 Apr 2023
      RRID:SCR_006646

      DOI: 10.1016/j.cub.2023.04.011

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S0960982223004591
  79. www.sciencedirect.com www.sciencedirect.com
    Comprehensive epigenomic profiling reveals the extent of disease-specific chromatin states and informs target discovery in ankylosing spondylitis
    1
    1. scibot 26 Apr 2023
      RRID:SCR_006646

      DOI: 10.1016/j.xgen.2023.100306

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2666979X23000721
  80. www.sciencedirect.com www.sciencedirect.com
    Novel enhancers conferring compensatory transcriptional regulation of Nkx2-5 in heart development
    1
    1. scibot 21 Apr 2023
      RRID:SCR_006646

      DOI: 10.1016/j.isci.2023.106509

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2589004223005862
  81. www.sciencedirect.com www.sciencedirect.com
    Elevated enhancer-oncogene contacts and higher oncogene expression levels by recurrent CTCF inactivating mutations in acute T cell leukemia
    1
    1. scibot 15 Apr 2023
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2023.112373

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2211124723003844
  82. 52.53.155.43 52.53.155.43
    Active maintenance of CD8+ T cell naïvety through regulation of global genome architecture
    1
    1. scibot 12 Apr 2023
      RRID:SCR_006646

      DOI: 10.1101/2023.02.26.530139

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    52.53.155.43/466ebedd8046ca94e96cd8cd2fcd3a0cdd9678e2/2023.02.26.530139v1.full-html.html
  83. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    SWI/SNF Blockade Disrupts PU.1-Directed Enhancer Programs in Normal Hematopoietic Cells and Acute Myeloid Leukemia
    1
    1. scibot 12 Apr 2023
      RRID:SCR_006646

      DOI: 10.1158/0008-5472.CAN-22-2129

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10071820/
  84. Mar 2023
  85. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the roundjaw bonefish (Albula glossodonta), a vulnerable circumtropical sportfish
    1
    1. scibot 29 Mar 2023
      RRID:SCR_006646

      DOI: 10.46471/gigabyte.44

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @evieth

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10038134/
  86. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    ViReMa: a virus recombination mapper of next-generation sequencing data characterizes diverse recombinant viral nucleic acids
    1
    1. scibot 22 Mar 2023
      RRID:SCR_006646

      DOI: 10.1093/gigascience/giad009

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10025937/
  87. www.sciencedirect.com www.sciencedirect.com
    A central chaperone-like role for 14-3-3 proteins in human cells
    1
    1. scibot 17 Mar 2023
      RRID:SCR_006646

      DOI: 10.1016/j.molcel.2023.02.018

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1097276523001211
  88. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    MeCP2 regulates Gdf11, a dosage-sensitive gene critical for neurological function
    1
    1. scibot 04 Mar 2023
      RRID:SCR_00646

      DOI: 10.7554/eLife.83806

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @evieth

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646 RRIDCUR:Unresolved
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9977283/
  89. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genome of a giant (trevally): Caranx ignobilis
    1
    1. scibot 02 Mar 2023
      RRID:SCR_006646

      DOI: 10.46471/gigabyte.67

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @evieth

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9694125/
  90. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-scale assembly of the highly heterozygous genome of red clover (Trifolium pratense L.), an allogamous forage crop species
    1
    1. scibot 02 Mar 2023
      RRID:SCR_006646

      DOI: 10.46471/gigabyte.42

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9650271/
  91. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The first complete mitochondrial genome of Diadema antillarum (Diadematoida, Diadematidae)
    1
    1. scibot 02 Mar 2023
      RRID:SCR_006646

      DOI: 10.46471/gigabyte.73

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9693923/
  92. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    svaRetro and svaNUMT: modular packages for annotating retrotransposed transcripts and nuclear integration of mitochondrial DNA in genome sequencing data
    1
    1. scibot 02 Mar 2023
      RRID:SCR_006646

      DOI: 10.46471/gigabyte.70

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9694029/
  93. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality draft genome for Melaleuca alternifolia (tea tree): a new platform for evolutionary genomics of myrtaceous terpene-rich species
    1
    1. scibot 02 Mar 2023
      RRID:SCR_006646

      DOI: 10.46471/gigabyte.28

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9650293/
  94. Feb 2023
  95. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of Musa beccarii shows extensive chromosomal rearrangements and genome expansion during evolution of Musaceae genomes
    1
    1. scibot 23 Feb 2023
      RRID:SCR_006646

      DOI: 10.1093/gigascience/giad005

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9941839/
  96. www.sciencedirect.com www.sciencedirect.com
    A chromosome-level genome assembly of Ostrea denselamellosa provides initial insights into its evolution
    1
    1. scibot 16 Feb 2023
      RRID:SCR_006646

      DOI: 10.1016/j.ygeno.2023.110582

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S0888754323000265
  97. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome-wide epigenetic and mRNA-expression profiling followed by CRISPR/Cas9-mediated gene-disruptions corroborate the MIR141/MIR200C-ZEB1/ZEB2-FGFR1 axis in acquired EMT-associated EGFR TKI-resistance in NSCLC cells
    1
    1. scibot 11 Feb 2023
      RRID:SCR_006646

      DOI: 10.21037/tlcr-22-507

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9903082/
  98. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Loss of PBRM1 alters promoter histone modifications and activates ALDH1A1 to drive renal cell carcinoma
    1
    1. scibot 09 Feb 2023
      RRID:SCR_006646

      DOI: 10.1158/1541-7786.MCR-21-1039

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9357026/
  99. Jan 2023
  100. www.sciencedirect.com www.sciencedirect.com
    Enrichment of oral-derived bacteria in inflamed colorectal tumors and distinct associations of Fusobacterium in the mesenchymal subtype
    1
    1. scibot 27 Jan 2023
      RRID:SCR_006646

      DOI: 10.1016/j.xcrm.2023.100920

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2666379123000058
  101. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Human Papillomavirus 42 Drives Digital Papillary Adenocarcinoma and Elicits a Germ Cell–like Program Conserved in HPV-Positive Cancers
    1
    1. scibot 15 Jan 2023
      RRID:SCR_006646

      DOI: 10.1158/2159-8290.CD-22-0489

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9827110/
  102. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PRC2 Inactivating Mutations in Cancer Enhance Cytotoxic Response to DNMT1 Targeted Therapy via Enhanced Viral Mimicry
    1
    1. scibot 07 Jan 2023
      RRID:SCR_006646

      DOI: 10.1158/2159-8290.CD-21-1671

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9437570/
  103. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comparative Genomics Provides Etiologic and Biological Insight into Melanoma Subtypes
    1
    1. scibot 07 Jan 2023
      RRID:SCR_006646

      DOI: 10.1158/2159-8290.CD-22-0603

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9716259/
  104. Dec 2022
  105. aacrjournals.org aacrjournals.org
    BAF complex maintains glioma stem cells in pediatric H3K27M-glioma
    1
    1. scibot 03 Dec 2022
      RRID:SCR_006646

      DOI: 10.1158/2159-8290.CD-21-1491

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    aacrjournals.org/cancerdiscovery/article/12/12/2880/711164/BAF-Complex-Maintains-Glioma-Stem-Cells-in
  106. Nov 2022
  107. www.sciencedirect.com www.sciencedirect.com
    Tip60-mediated H2A.Z acetylation promotes neuronal fate specification and bivalent gene activation
    1
    1. scibot 24 Nov 2022
      RRID:SCR_006646

      DOI: 10.1016/j.molcel.2022.11.002

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/abs/pii/S1097276522010644
  108. www.sciencedirect.com www.sciencedirect.com
    Reconstructing mutational lineages in breast cancer by multi-patient-targeted single-cell DNA sequencing
    1
    1. scibot 10 Nov 2022
      RRID:SCR_006646

      DOI: 10.1016/j.xgen.2022.100215

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2666979X22001689
  109. academic.oup.com academic.oup.com
    Capparis spinosa var. herbacea genome provides the first genomic instrument for a diversity and evolution study of the Capparaceae family
    1
    1. scibot 03 Nov 2022
      RRID:SCR_006646

      DOI: 10.1093/gigascience/giac106

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac106/6780308
  110. Oct 2022
  111. www.sciencedirect.com www.sciencedirect.com
    A cis-regulatory lexicon of DNA motif combinations mediating cell-type-specific gene regulation
    1
    1. scibot 06 Oct 2022
      RRID:SCR_006646

      DOI: 10.1016/j.xgen.2022.100191

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2666979X22001409
  112. Sep 2022
  113. www.sciencedirect.com www.sciencedirect.com
    FOXA1 regulates alternative splicing in prostate cancer
    1
    1. scibot 29 Sep 2022
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2022.111404

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2211124722012414
  114. www.sciencedirect.com www.sciencedirect.com
    A small proportion of X-linked genes contribute to X chromosome upregulation in early embryos via BRD4-mediated transcriptional activation
    1
    1. scibot 16 Sep 2022
      RRID:SCR_006646

      DOI: 10.1016/j.cub.2022.08.059

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S0960982222013811
  115. www.sciencedirect.com www.sciencedirect.com
    The human mitochondrial genome contains a second light strand promoter
    1
    1. scibot 03 Sep 2022
      RRID:SCR_006646

      DOI: 10.1016/j.molcel.2022.08.011

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S109727652200764X
  116. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Intracellular cholesterol pools regulate oncogenic signaling and epigenetic circuitries in Early T-cell Precursor Acute Lymphoblastic Leukemia
    1
    1. scibot 02 Sep 2022
      RRID:SCR_006646

      DOI: 10.1158/2159-8290.CD-21-0551

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8904296/
  117. Aug 2022
  118. 52.53.155.43 52.53.155.43
    cd-21-1671-html.html
    1
    1. scibot 27 Aug 2022
      RRID:SCR_006646

      DOI: 10.1158/2159-8290.cd-21-1671

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    52.53.155.43/5e67ddaf80a7b90ec85c4b24452e48b76eabacbf/cd-21-1671-html.html
  119. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Adrenergic receptor signaling induced by Klf15, a regulator of regeneration enhancer, promotes kidney reconstruction
    1
    1. scibot 26 Aug 2022
      RRID:SCR_006646

      DOI: 10.1073/pnas.2204338119

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9388080/
  120. www.sciencedirect.com www.sciencedirect.com
    Detection of m6A in single cultured cells using scDART-seq
    1
    1. scibot 22 Aug 2022
      RRID:SCR_006646

      DOI: 10.1016/j.xpro.2022.101646

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2666166722005263
  121. www.sciencedirect.com www.sciencedirect.com
    The sage genome provides insight into the evolutionary dynamics of diterpene biosynthesis gene cluster in plants
    1
    1. scibot 17 Aug 2022
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2022.111236

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2211124722010531
  122. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Transcription Elongation Machinery Is a Druggable Dependency and Potentiates Immunotherapy in Glioblastoma Stem Cells
    1
    1. scibot 04 Aug 2022
      RRID:SCR_006646

      DOI: 10.1158/2159-8290.CD-20-1848

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8831451/
  123. Jul 2022
  124. 52.53.155.43 52.53.155.43
    cir-21-0643-html.html
    1
    1. scibot 29 Jul 2022
      RRID:SCR_006646

      DOI: 10.1158/2326-6066.CIR-21-0643

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    52.53.155.43/6d3233cac313fd81cc115a198e89306ed5395551/cir-21-0643-html.html
  125. www.sciencedirect.com www.sciencedirect.com
    EGFR signaling activates intestinal stem cells by promoting mitochondrial biogenesis and β-oxidation
    1
    1. scibot 27 Jul 2022
      SCR_006646

      DOI: 10.1016/j.cub.2022.07.003

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S0960982222011046
  126. www.researchsquare.com www.researchsquare.com
    Home
    1
    1. scibot 13 Jul 2022
      RRID:SCR_006646

      DOI: 10.21203/rs.3.rs-658360/v1

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    researchsquare.com/article/rs-1753218/v1
  127. Jun 2022
  128. 52.53.155.43 52.53.155.43
    mcr-21-1039-html.html
    2
    1. scibot 30 Jun 2022
      RRID:SCR_006646

      DOI: 10.1158/1541-7786.mcr-21-1039

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    2. scibot 24 Jun 2022
      RRID:SCR_006646

      DOI: 10.1158/1541-7786.mcr-21-1039

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    52.53.155.43/240568277fe12e2c0a6052e56a90b7b23828225f/mcr-21-1039 (1)-html.html
  129. www.nature.com www.nature.com
    TCF-1 promotes chromatin interactions across topologically associating domains in T cell progenitors
    1
    1. scibot 22 Jun 2022
      RRID:SCR_006646

      DOI: 10.1038/s41590-022-01232-z

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41590-022-01232-z
  130. elifesciences.org elifesciences.org
    Dnmt3a knockout in excitatory neurons impairs postnatal synapse maturation and increases the repressive histone modification H3K27me3
    1
    1. scibot 09 Jun 2022
      RRID:SCR_006646

      DOI: 10.7554/eLife.66909

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    elifesciences.org/articles/66909
  131. www.sciencedirect.com www.sciencedirect.com
    EED is required for mouse primordial germ cell differentiation in the embryonic gonad
    1
    1. scibot 09 Jun 2022
      RRID:SCR_006646

      DOI: 10.1016/j.devcel.2022.05.012

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1534580722003690
  132. www.sciencedirect.com www.sciencedirect.com
    Direct epitranscriptomic regulation of mammalian translation initiation through N4-acetylcytidine
    1
    1. scibot 09 Jun 2022
      RRID:SCR_006646

      DOI: 10.1016/j.molcel.2022.05.016

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S109727652200483X
  133. www.sciencedirect.com www.sciencedirect.com
    JAZF1-SUZ12 dysregulates PRC2 function and gene expression during cell differentiation
    1
    1. scibot 03 Jun 2022
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2022.110889

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2211124722006647
  134. May 2022
  135. rupress.org rupress.org
    Ribbon boosts ribosomal protein gene expression to coordinate organ form and function
    1
    1. scibot 27 May 2022
      RRID:SCR_006646

      DOI: 10.1083/jcb.202110073

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    rupress.org/jcb/article/221/4/e202110073/213030/Ribbon-boosts-ribosomal-protein-gene-expression-to
  136. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    DNA-PK promotes DNA end resection at DNA double strand breaks in G0 cells
    1
    1. scibot 24 May 2022
      RRID:SCR_006646

      DOI: 10.7554/eLife.74700

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9122494/
  137. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Long-read and chromosome-scale assembly of the hexaploid wheat genome achieves high resolution for research and breeding
    1
    1. scibot 05 May 2022
      RRID:SCR_006646

      DOI: 10.1093/gigascience/giac034

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9049114/
  138. Apr 2022
  139. bpspubs.onlinelibrary.wiley.com bpspubs.onlinelibrary.wiley.com
    BPS Publications
    1
    1. scibot 28 Apr 2022
      RRID:SCR_006646

      DOI: 10.1111/bph.15838

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    bpspubs.onlinelibrary.wiley.com/doi/10.1111/bph.15838
  140. www.sciencedirect.com www.sciencedirect.com
    RPAP2 regulates a transcription initiation checkpoint by inhibiting assembly of pre-initiation complex
    1
    1. scibot 27 Apr 2022
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2022.110732

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2211124722004934
  141. www.sciencedirect.com www.sciencedirect.com
    Trans-omics analysis of insulin action reveals a cell growth sub-network which co-regulates anabolic processes
    2
    1. scibot 26 Apr 2022
      RRID:SCR_006646

      DOI: 10.1016/j.isci.2022.104231

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    2. scibot 26 Apr 2022
      RRID:SCR_006646

      DOI: 10.1016/j.isci.2022.104231

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2589004222005016
  142. www.sciencedirect.com www.sciencedirect.com
    An adult-stage transcriptional program for survival of serotonergic connectivity
    1
    1. scibot 21 Apr 2022
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2022.110711

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2211124722004727
  143. www.sciencedirect.com www.sciencedirect.com
    HNF4A modulates glucocorticoid action in the liver
    1
    1. scibot 20 Apr 2022
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2022.110697

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2211124722004557
  144. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Latent TGFβ-binding proteins 1 and 3 protect the larval zebrafish outflow tract from aneurysmal dilatation
    1
    1. scibot 12 Apr 2022
      RRID:SCR_006646

      DOI: 10.1242/dmm.046979

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8990920/
  145. Mar 2022
  146. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The haplotype-resolved chromosome pairs of a heterozygous diploid African cassava cultivar reveal novel pan-genome and allele-specific transcriptome features
    1
    1. scibot 31 Mar 2022
      RRID:SCR_006646

      DOI: 10.1093/gigascience/giac028

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8952263/
  147. www.sciencedirect.com www.sciencedirect.com
    Viperin triggers ribosome collision-dependent translation inhibition to restrict viral replication
    1
    1. scibot 26 Mar 2022
      RRID:SCR_006646

      DOI: 10.1016/j.molcel.2022.02.031

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1097276522002052
  148. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A test of the pioneer factor hypothesis using ectopic liver gene activation
    1
    1. scibot 04 Mar 2022
      RRID:SCR_006646

      DOI: 10.7554/eLife.73358

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8849321/
  149. www.sciencedirect.com www.sciencedirect.com
    Metabolic incorporation of electron-rich ribonucleosides enhances APEX-seq for profiling spatially restricted nascent transcriptome
    1
    1. scibot 04 Mar 2022
      RRID:SCR_006646

      DOI: 10.1016/j.chembiol.2022.02.005

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2451945622000861
  150. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Maelstrom functions in the production of Siwi-piRISC capable of regulating transposons in Bombyx germ cells
    1
    1. scibot 04 Mar 2022
      RRID:SCR_006646

      DOI: 10.1016/j.isci.2022.103914

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8881725/
  151. www.sciencedirect.com www.sciencedirect.com
    Identification of new ETV6 modulators through a high throughput functional screening
    1
    1. scibot 02 Mar 2022
      RRID:SCR_006646

      DOI: 10.1016/j.isci.2022.103858

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2589004222001286
  152. Feb 2022
  153. www.sciencedirect.com www.sciencedirect.com
    EBF1 nuclear repositioning instructs chromatin refolding to promote therapy resistance in T leukemic cells
    1
    1. scibot 23 Feb 2022
      RRID:SCR_006646

      DOI: 10.1016/j.molcel.2022.01.015

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1097276522000582
  154. www.sciencedirect.com www.sciencedirect.com
    Gene architecture directs splicing outcome in separate nuclear spatial regions
    1
    1. scibot 22 Feb 2022
      RRID:SCR_006646

      DOI: 10.1016/j.molcel.2022.02.001

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S109727652200106X
  155. journals.plos.org journals.plos.org
    The endoplasmic reticulum proteostasis network profoundly shapes the protein sequence space accessible to HIV envelope
    1
    1. scibot 22 Feb 2022
      RRID:SCR_006646

      DOI: 10.1371/journal.pbio.3001569

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    journals.plos.org/plosbiology/article
  156. www.sciencedirect.com www.sciencedirect.com
    Simultaneous cellular and molecular phenotyping of embryonic mutants using single-cell regulatory trajectories
    1
    1. scibot 18 Feb 2022
      RRID:SCR_006646

      DOI: 10.1016/j.devcel.2022.01.016

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1534580722000557
  157. academic.oup.com academic.oup.com
    An improved ovine reference genome assembly to facilitate in-depth functional annotation of the sheep genome
    1
    1. scibot 12 Feb 2022
      RRID:SCR_006646

      DOI: 10.1093/gigascience/giab096

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giab096/6521876
  158. Jan 2022
  159. www.sciencedirect.com www.sciencedirect.com
    scDART-seq reveals distinct m6A signatures and mRNA methylation heterogeneity in single cells
    1
    1. scibot 29 Jan 2022
      RRID:SCR_006646

      DOI: 10.1016/j.molcel.2021.12.038

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1097276521011436
  160. www.sciencedirect.com www.sciencedirect.com
    Dynamic chromatin state profiling reveals regulatory roles of auxin and cytokinin in shoot regeneration
    1
    1. scibot 27 Jan 2022
      RRID:SCR_006646

      DOI: 10.1016/j.devcel.2021.12.019

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S153458072101039X
  161. www.sciencedirect.com www.sciencedirect.com
    Multimodal regulatory elements within a hormone-specific super enhancer control a heterogeneous transcriptional response
    1
    1. scibot 26 Jan 2022
      RRID:SCR_006646

      DOI: 10.1016/j.molcel.2021.12.035

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1097276521011400
  162. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PRC1 sustains the integrity of neural fate in the absence of PRC2 function
    1
    1. scibot 22 Jan 2022
      RRID:SCR_006646

      DOI: 10.7554/eLife.72769

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8765755/
  163. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic loci mispositioning in Tmem120a knockout mice yields latent lipodystrophy
    1
    1. scibot 22 Jan 2022
      RRID:SCR_006646

      DOI: 10.1038/s41467-021-27869-2

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8758788/
  164. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Enhancer RNA Expression in Response to Glucocorticoid Treatment in Murine Macrophages
    1
    1. scibot 12 Jan 2022
      RRID:SCR_006646

      DOI: 10.3390/cells11010028

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8744892/
  165. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Heat shock factor 1 (HSF1) cooperates with estrogen receptor α (ERα) in the regulation of estrogen action in breast cancer cells
    1
    1. scibot 07 Jan 2022
      RRID:SCR_006646

      DOI: 10.7554/eLife.69843

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8709578/
  166. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    MAP3K7 loss drives enhanced androgen signaling and independently confers risk of recurrence in prostate cancer with joint loss of CHD1
    1
    1. scibot 05 Jan 2022
      RRID:SCR_006646

      DOI: 10.1158/1541-7786.MCR-20-0913

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8254790/
  167. Dec 2021
  168. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality genome and comparison of short- versus long-read transcriptome of the palaearctic duck Aythya fuligula (tufted duck)
    1
    1. scibot 23 Dec 2021
      RRID:SCR_006646

      DOI: 10.1093/gigascience/giab081

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8685854/
  169. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PEGS: An efficient tool for gene set enrichment within defined sets of genomic intervals
    1
    1. scibot 15 Dec 2021
      RRID:SCR_006646

      DOI: 10.12688/f1000research.53926.2

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8406447/
  170. www.cell.com www.cell.com
    MYC assembles and stimulates topoisomerases 1 and 2 in a “topoisome”
    1
    1. scibot 10 Dec 2021
      RRID:SCR_006646

      DOI: 10.1016/j.molcel.2021.11.016

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    cell.com/molecular-cell/fulltext/S1097-2765(21)00996-5
  171. www.sciencedirect.com www.sciencedirect.com
    Parity-induced changes to mammary epithelial cells control NKT cell expansion and mammary oncogenesis
    1
    1. scibot 08 Dec 2021
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2021.110099

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S221112472101593X
  172. Nov 2021
  173. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Disrupted PGR-B and ESR1 signaling underlies defective decidualization linked to severe preeclampsia
    1
    1. scibot 05 Nov 2021
      RRID:SCR_006646

      DOI: 10.7554/eLife.70753

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8553341/
  174. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Sequence features of retrotransposons allow for epigenetic variability
    1
    1. scibot 05 Nov 2021
      RRID:SCR_006646

      DOI: 10.7554/eLife.71104

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8555987/
  175. www.sciencedirect.com www.sciencedirect.com
    Acute depletion of the ARID1A subunit of SWI/SNF complexes reveals distinct pathways for activation and repression of transcription
    1
    1. scibot 03 Nov 2021
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2021.109943

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2211124721014169
  176. Oct 2021
  177. www.sciencedirect.com www.sciencedirect.com
    Conserved heterodimeric GTPase Rbg1/Tma46 promotes efficient translation in eukaryotic cells
    1
    1. scibot 27 Oct 2021
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2021.109877

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2211124721013474
  178. www.nature.com www.nature.com
    An atlas of gene regulatory elements in adult mouse cerebrum
    1
    1. scibot 21 Oct 2021
      RRID:SCR_006646

      DOI: 10.1038/s41586-021-03604-1

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41586-021-03604-1
  179. www.sciencedirect.com www.sciencedirect.com
    DREAM represses distinct targets by cooperating with different THAP domain proteins
    1
    1. scibot 21 Oct 2021
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2021.109835

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2211124721012997
  180. www.sciencedirect.com www.sciencedirect.com
    Evolutionary history of the extinct Sardinian dhole
    1
    1. scibot 16 Oct 2021
      RRID:SCR_006646

      DOI: 10.1016/j.cub.2021.09.059

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S0960982221013154
  181. www.nature.com www.nature.com
    A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex
    1
    1. scibot 14 Oct 2021
      RRID:SCR_006646

      DOI: 10.1038/s41586-021-03500-8

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41586-021-03500-8
  182. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Epigenomic and Transcriptomic Dynamics During Human Heart Organogenesis
    1
    1. scibot 13 Oct 2021
      RRID:SCR_006646

      DOI: 10.1161/CIRCRESAHA.120.316704

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC7554226/
  183. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Information content differentiates enhancers from silencers in mouse photoreceptors
    1
    1. scibot 08 Oct 2021
      RRID:SCR_006646

      DOI: 10.7554/eLife.67403

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8492058/
  184. www.sciencedirect.com www.sciencedirect.com
    PIWI-mediated control of tissue-specific transposons is essential for somatic cell differentiation
    1
    1. scibot 06 Oct 2021
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2021.109776

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2211124721012304
  185. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Tiled-ClickSeq for targeted sequencing of complete coronavirus genomes with simultaneous capture of RNA recombination and minority variants
    1
    1. scibot 02 Oct 2021
      RRID:SCR_006646

      DOI: 10.7554/eLife.68479

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8478411/
  186. Sep 2021
  187. link.springer.com link.springer.com
    Elevated transcription of transposable elements is accompanied by het-siRNA-driven de novo DNA methylation in grapevine embryogenic callus
    1
    1. scibot 22 Sep 2021
      RRID:SCR_006646

      DOI: 10.1186/s12864-021-07973-9

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    link.springer.com/article/10.1186/s12864-021-07973-9
  188. www.sciencedirect.com www.sciencedirect.com
    SPT5 stabilizes RNA polymerase II, orchestrates transcription cycles, and maintains the enhancer landscape
    1
    1. scibot 17 Sep 2021
      RRID:SCR_006646

      DOI: 10.1016/j.molcel.2021.08.029

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1097276521006961
  189. www.sciencedirect.com www.sciencedirect.com
    The prolyl-isomerase PIN1 is essential for nuclear Lamin-B structure and function and protects heterochromatin under mechanical stress
    1
    1. scibot 16 Sep 2021
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2021.109694

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2211124721011414
  190. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    KLF10 integrates circadian timing and sugar signaling to coordinate hepatic metabolism
    1
    1. scibot 14 Sep 2021
      RRID:SCR_006646

      DOI: 10.7554/eLife.65574

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8410083/
  191. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    LIN37-DREAM prevents DNA end resection and homologous recombination at DNA double-strand breaks in quiescent cells
    1
    1. scibot 11 Sep 2021
      RRID:SCR_006646

      DOI: 10.7554/eLife.68466

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8416021/
  192. www.sciencedirect.com www.sciencedirect.com
    Integrated protocol for exitron and exitron-derived neoantigen identification using human RNA-seq data with ScanExitron and ScanNeo
    1
    1. scibot 08 Sep 2021
      RRID:SCR_006646

      DOI: 10.1016/j.xpro.2021.100788

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2666166721004949
  193. www.sciencedirect.com www.sciencedirect.com
    Multiplatform discovery and regulatory function analysis of structural variations in non-small cell lung carcinoma
    1
    1. scibot 08 Sep 2021
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2021.109660

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2211124721011049
  194. www.sciencedirect.com www.sciencedirect.com
    Transcriptional control of brain tumor stem cells by a carbohydrate binding protein
    1
    1. scibot 01 Sep 2021
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2021.109647

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2211124721010901
  195. Aug 2021
  196. www.sciencedirect.com www.sciencedirect.com
    The oral microbiota of wild bears in Sweden reflects the history of antibiotic use by humans
    1
    1. scibot 26 Aug 2021
      RRID:SCR_006646

      DOI: 10.1016/j.cub.2021.08.010

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S096098222101112X
  197. www.sciencedirect.com www.sciencedirect.com
    Epigenomic and transcriptional profiling identifies impaired glyoxylate detoxification in NAFLD as a risk factor for hyperoxaluria
    1
    1. scibot 25 Aug 2021
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2021.109526

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2211124721009578
  198. www.sciencedirect.com www.sciencedirect.com
    An essential role for the piRNA pathway in regulating the ribosomal RNA pool in C. elegans
    1
    1. scibot 16 Aug 2021
      RRID:SCR_006646

      DOI: 10.1016/j.devcel.2021.07.014

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1534580721005979
  199. www.nature.com www.nature.com
    Genome-wide and sister chromatid-resolved profiling of protein occupancy in replicated chromatin with ChOR-seq and SCAR-seq
    1
    1. scibot 16 Aug 2021
      SCR_006646

      DOI: 10.1038/s41596-021-00585-3

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41596-021-00585-3
  200. www.sciencedirect.com www.sciencedirect.com
    A composite DNA element that functions as a maintainer required for epigenetic inheritance of heterochromatin
    1
    1. scibot 15 Aug 2021
      RRID:SCR_006646

      DOI: 10.1016/j.molcel.2021.07.017

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1097276521005864
  201. www.sciencedirect.com www.sciencedirect.com
    Enhancer RNA m6A methylation facilitates transcriptional condensate formation and gene activation
    1
    1. scibot 15 Aug 2021
      RRID:SCR_006646

      DOI: 10.1016/j.molcel.2021.07.024

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1097276521005931
  202. academic.oup.com academic.oup.com
    RepeatFiller newly identifies megabases of aligning repetitive sequences and improves annotations of conserved non-exonic elements
    1
    1. scibot 14 Aug 2021
      RRID:SCR_006646

      DOI: 10.1093/gigascience/giz132

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    academic.oup.com/gigascience/article/8/11/giz132/5631861
  203. elifesciences.org elifesciences.org
    Evolution of reduced co-activator dependence led to target expansion of a starvation response pathway
    1
    1. scibot 12 Aug 2021
      RRID:SCR_006646

      DOI: 10.7554/eLife.25157

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    elifesciences.org/articles/25157
  204. www.sciencedirect.com www.sciencedirect.com
    Untitled document
    1
    1. scibot 10 Aug 2021
      RRID:SCR_006646

      DOI: 10.1016/j.cell.2018.11.022

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S0092867418315149
  205. www.sciencedirect.com www.sciencedirect.com
    Lymphocyte-Specific Chromatin Accessibility Pre-determines Glucocorticoid Resistance in Acute Lymphoblastic Leukemia
    1
    1. scibot 10 Aug 2021
      RRID:SCR_006646

      DOI: 10.1016/j.ccell.2018.11.002

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1535610818305233
  206. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
    1
    1. scibot 07 Aug 2021
      RRID:SCR_006646

      DOI: 10.7554/eLife.28652

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC5614556/
  207. academic.oup.com academic.oup.com
    Untitled document
    1
    1. scibot 05 Aug 2021
      RRID:SCR_006646

      DOI: 10.1093/gigascience/gix115

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    academic.oup.com/gigascience/article/6/12/gix115/4689116
  208. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
    1
    1. scibot 04 Aug 2021
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2019.03.108

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC6486480/
  209. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
    1
    1. scibot 03 Aug 2021
      RRID:SCR_006646

      DOI: 10.1093/gigascience/giy139

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC6290886/
  210. www.sciencedirect.com www.sciencedirect.com
    Untitled document
    1
    1. scibot 02 Aug 2021
      RRID:SCR_006646

      DOI: 10.1016/j.cub.2018.11.055

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S0960982218315549
  211. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
    1
    1. scibot 01 Aug 2021
      RRID:SCR_006646

      DOI: 10.7554/eLife.37750

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC6095691/
  212. www.sciencedirect.com www.sciencedirect.com
    Untitled document
    1
    1. scibot 01 Aug 2021
      RRID:SCR_006646

      DOI: 10.1016/j.immuni.2018.10.012

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1074761318304771
  213. Jul 2021
  214. www.nature.com www.nature.com
    Untitled document
    1
    1. scibot 31 Jul 2021
      RRID:SCR_006646

      DOI: 10.1038/s41586-018-0845-0

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41586-018-0845-0 
  215. elifesciences.org elifesciences.org
    A scalable platform for the development of cell-type-specific viral drivers
    1
    1. scibot 30 Jul 2021
      BEDtools

      DOI: 10.7554/eLife.48089

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @Naa003

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646 RRIDCUR:Missing
    Visit annotations in context

    Tags

    Annotators

    URL

    elifesciences.org/articles/48089
  216. www.nature.com www.nature.com
    α-Ketoglutarate links p53 to cell fate during tumour suppression
    1
    1. scibot 30 Jul 2021
      BEDTools

      DOI: 10.1038/s41586-019-1577-5

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @Naa003

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646 RRIDCUR:Missing
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41586-019-1577-5
  217. link.springer.com link.springer.com
    Cold-induced lipid dynamics and transcriptional programs in white adipose tissue
    1
    1. scibot 30 Jul 2021
      BEDTools

      DOI: 10.1186/s12915-019-0693-x

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @Naa003

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646 RRIDCUR:Missing
    Visit annotations in context

    Tags

    Annotators

    URL

    link.springer.com/article/10.1186/s12915-019-0693-x
  218. academic.oup.com academic.oup.com
    HUMAN TROPHOBLAST DIFFERENTIATION IS ASSOCIATED WITH PROFOUND GENE REGULATORY AND EPIGENETIC CHANGES
    1
    1. scibot 30 Jul 2021
      BEDTools

      DOI: 10.1210/en.2019-00144

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @Naa003

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646 RRIDCUR:Missing
    Visit annotations in context

    Tags

    Annotators

    URL

    academic.oup.com/endo/article-abstract/160/9/2189/5530214
  219. elifesciences.org elifesciences.org
    Compact and highly active next-generation libraries for CRISPR-mediated gene repression and activation
    1
    1. scibot 30 Jul 2021
      RRID:SCR_006646

      DOI: 10.7554/eLife.19760

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    elifesciences.org/articles/19760
  220. www.sciencedirect.com www.sciencedirect.com
    Targeting CDK9 Reactivates Epigenetically Silenced Genes in Cancer
    1
    1. scibot 30 Jul 2021
      RRID:SCR_006646

      DOI: 10.1016/j.cell.2018.09.051

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @Jmenke

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646 RRIDCUR:Validated
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S0092867418312637
  221. elifesciences.org elifesciences.org
    RbFox1 up-regulation impairs BDNF-dependent hippocampal LTP by dysregulating TrkB isoform expression levels
    1
    1. scibot 29 Jul 2021
      bedtools

      DOI: 10.7554/eLife.49673

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @Naa003

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646 RRIDCUR:Missing
    Visit annotations in context

    Tags

    Annotators

    URL

    elifesciences.org/articles/49673
  222. www.embopress.org www.embopress.org
    A genome‐wide screen identifies IRF2 as a key regulator of caspase‐4 in human cells
    1
    1. scibot 29 Jul 2021
      BEDtools

      DOI: 10.15252/embr.201948235

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @Naa003

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646 RRIDCUR:Missing
    Visit annotations in context

    Tags

    Annotators

    URL

    embopress.org/doi/full/10.15252/embr.201948235
  223. elifesciences.org elifesciences.org
    Toxoplasma gondii infection drives conversion of NK cells into ILC1-like cells
    1
    1. scibot 29 Jul 2021
      BEDTools

      DOI: 10.7554/eLife.47605

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @Naa003

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646 RRIDCUR:Missing
    Visit annotations in context

    Tags

    Annotators

    URL

    elifesciences.org/articles/47605
  224. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
    1
    1. scibot 29 Jul 2021
      RRID:SCR_006646

      DOI: 10.1093/gigascience/gix115

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC5751039/
  225. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Subregional differences in astrocytes underlie selective neurodegeneration or protection in Parkinson's disease models in culture
    1
    1. scibot 28 Jul 2021
      BEDTools

      DOI: 10.1002/glia.23627

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @Naa003

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRIDCUR:Missing RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    onlinelibrary.wiley.com/doi/full/10.1002/glia.23627
  226. elifesciences.org elifesciences.org
    Transitions in cell potency during early mouse development are driven by Notch
    1
    1. scibot 28 Jul 2021
      BEDTOOLS

      DOI: 10.7554/eLife.42930

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @Naa003

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRIDCUR:Missing RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    elifesciences.org/articles/42930
  227. www.sciencedirect.com www.sciencedirect.com
    PI3K Inhibition Activates SGK1 via a Feedback Loop to Promote Chromatin-Based Regulation of ER-Dependent Gene Expression
    1
    1. scibot 28 Jul 2021
      Bedtools

      DOI: 10.1016/j.celrep.2019.02.111

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @ethanbadger

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRIDCUR:Missing RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2211124719302979
  228. www.sciencedirect.com www.sciencedirect.com
    RNA Polymerase II CTD Tyrosine 1 Is Required for Efficient Termination by the Nrd1-Nab3-Sen1 Pathway
    1
    1. scibot 28 Jul 2021
      BEDTools

      DOI: 10.1016/j.molcel.2018.12.002

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @Naa003

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRIDCUR:Missing RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1097276518310323
  229. jneuroinflammation.biomedcentral.com jneuroinflammation.biomedcentral.com
    Untitled document
    1
    1. scibot 28 Jul 2021
      RRID:SCR_006646

      DOI: 10.1186/s12974-018-1240-3

      Resource: BEDTools (RRID:SCR_006646)

      Curator: @scibot

      SciCrunch record: RRID:SCR_006646

      What is this?
      RRID:SCR_006646
    Visit annotations in context

    Tags

    Annotators

    URL

    jneuroinflammation.biomedcentral.com/articles/10.1186/s12974-018-1240-3