69 Matching Annotations
  1. Aug 2025
  2. www.sciencedirect.com www.sciencedirect.com
    A unified cell atlas of vascular plants reveals cell-type foundational genes and accelerates gene discovery
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    sciencedirect.com/science/article/pii/S009286742500858X
  3. Jul 2025
  4. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Dissecting FAP+ Cell Diversity in Pancreatic Cancer Uncovers an Interferon-Response Subtype of Cancer-Associated Fibroblasts with Tumor-Restraining Properties
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    pmc.ncbi.nlm.nih.gov/articles/PMC12214878/
  5. Jun 2025
  6. gigabytejournal.com gigabytejournal.com
    A draft genome assembly for the dart-poison frog Phyllobates terribilis
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    gigabytejournal.com/articles/157
  7. www.sciencedirect.com www.sciencedirect.com
    Repeated duplications and losses shaped SMC complex evolution from archaeal ancestors to modern eukaryotes
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    sciencedirect.com/science/article/pii/S2211124725006266
  8. 52.53.155.43 52.53.155.43
    ycaf090-html.html
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    52.53.155.43/78af6db3eb536331564207a201ca5c6a2375d3ac/ycaf090-html.html
  9. May 2025
  10. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Repeatome diversity in sea anemone genomics (Cnidaria: Actiniaria) based on the Actiniaria-REPlib library
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    pmc.ncbi.nlm.nih.gov/articles/PMC12070523/
  11. dx.doi.org dx.doi.org
    Telomere-to-telomere genome of common bean (Phaseolus vulgaris L., YP4)
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    dx.doi.org/10.1093/gigascience/giaf001
  12. Apr 2025
  13. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Constructing a draft Indian cattle pangenome using short-read sequencing
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    pmc.ncbi.nlm.nih.gov/articles/PMC11994783/
  14. Mar 2025
  15. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Lineage-Specific Class-A GPCR Dynamics Reflect Diverse Chemosensory Adaptations in Lophotrochozoa
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    pmc.ncbi.nlm.nih.gov/articles/PMC11886862/
  16. link.springer.com link.springer.com
    Microbial dysbiosis with tryptophan metabolites alteration in lower respiratory tract is associated with clinical responses to anti-PD-1 immunotherapy in advanced non-small cell lung cancer
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    link.springer.com/article/10.1007/s00262-025-03996-3
  17. academic.oup.com academic.oup.com
    Benchmarking short-read metagenomics tools for removing host contamination
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giaf004/8045180
  18. Jan 2025
  19. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Diaci v3.0: chromosome-level assembly, de novo transcriptome, and manual annotation of Diaphorina citri, insect vector of Huanglongbing
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    pmc.ncbi.nlm.nih.gov/articles/PMC11659978/
  20. Aug 2024
  21. www.sciencedirect.com www.sciencedirect.com
    Exploring Waterborne Viruses in Groundwater: Quantification and Virome Characterization via Passive Sampling and Targeted Enrichment Sequencing
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    sciencedirect.com/science/article/pii/S0043135424012041
  22. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A trade-off in evolution: the adaptive landscape of spiders without venom glands
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    ncbi.nlm.nih.gov/pmc/articles/PMC11299198/
  23. Jul 2024
  24. www.biorxiv.org www.biorxiv.org
    Evolutionary Dynamics of Lineage-Specific Class-A GPCR Subsets Reveal Widespread Chemosensory Roles and Adaptations in Lophotrochozoa
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    biorxiv.org/content/10.1101/2024.07.14.603414v1
  25. Apr 2024
  26. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Large-scale genomic survey with deep learning-based method reveals strain-level phage specificity determinants
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    ncbi.nlm.nih.gov/pmc/articles/PMC11034027/
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    Staphylococcus aureus skin colonization is mediated by SasG lectin variation
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    sciencedirect.com/science/article/pii/S2211124724003504
  28. Mar 2024
  29. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Transcriptome-informed identification and characterisation of Planococcus citri cis- and trans-isoprenyl diphosphate synthase genes
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    ncbi.nlm.nih.gov/pmc/articles/PMC10960109/
  30. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Quantitative proteome dynamics across embryogenesis in a model chordate
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    ncbi.nlm.nih.gov/pmc/articles/PMC10951915/
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    Peripheral neuronal activation shapes the microbiome and alters gut physiology
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    sciencedirect.com/science/article/pii/S221112472400281X
  32. Feb 2024
  33. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Wastewater-based epidemiology applied at the building-level reveals distinct virome profiles based on the age of the contributing individuals
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    ncbi.nlm.nih.gov/pmc/articles/PMC10832175/
  34. Oct 2023
  35. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The chromosome-level genome of Chinese praying mantis Tenodera sinensis (Mantodea: Mantidae) reveals its biology as a predator
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    ncbi.nlm.nih.gov/pmc/articles/PMC10600911/
  36. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome of the venomous snail Kalloconus canariensis: a valuable model for venomics and comparative genomics
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    ncbi.nlm.nih.gov/pmc/articles/PMC10541794/
  37. Sep 2023
  38. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Thermophilic methane oxidation is widespread in Aotearoa-New Zealand geothermal fields
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    ncbi.nlm.nih.gov/pmc/articles/PMC10502179/
  39. link.springer.com link.springer.com
    Maize heat shock proteins—prospection, validation, categorization and in silico analysis of the different ZmHSP families
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    link.springer.com/article/10.1007/s44154-023-00104-2
  40. Mar 2023
  41. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Design of a stabilized RBD enables potently neutralizing SARS-CoV-2 single-component nanoparticle vaccines
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    ncbi.nlm.nih.gov/pmc/articles/PMC9986124/
  42. pubs.rsc.org pubs.rsc.org
    Effectiveness of passive sampling for the detection and genetic characterization of human viruses in wastewater
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    pubs.rsc.org/en/content/articlehtml/2023/ew/d2ew00867j
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-scale draft genome sequence of horsegram (Macrotyloma uniflorum)
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650294/
  44. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Sex-based de novo transcriptome assemblies of the parasitoid wasp Encarsia suzannae, a host of the manipulative heritable symbiont Cardinium hertigii
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    ncbi.nlm.nih.gov/pmc/articles/PMC9693781/
  45. Feb 2023
  46. www.sciencedirect.com www.sciencedirect.com
    A chromosome-level genome assembly of Ostrea denselamellosa provides initial insights into its evolution
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    sciencedirect.com/science/article/pii/S0888754323000265
  47. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of goose provides insight into the adaptation and growth of local goose breeds
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad003/7025323
  48. Jan 2023
  49. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Resistance to white spot syndrome virus in the European shore crab is associated with suppressed virion trafficking and heightened immune responses
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    ncbi.nlm.nih.gov/pmc/articles/PMC9831657/
  50. Nov 2022
  51. academic.oup.com academic.oup.com
    Improved microbial genomes and gene catalog of the chicken gut from metagenomic sequencing of high-fidelity long reads
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac116/6833030
  52. Sep 2022
  53. www.sciencedirect.com www.sciencedirect.com
    Genomic analysis reveals cryptic diversity in aphelids and sheds light on the emergence of Fungi
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    sciencedirect.com/science/article/pii/S0960982222013938
  54. May 2022
  55. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level reference genome of Ensete glaucum gives insight into diversity and chromosomal and repetitive sequence evolution in the Musaceae
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    ncbi.nlm.nih.gov/pmc/articles/PMC9055855/
  56. Mar 2022
  57. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The haplotype-resolved chromosome pairs of a heterozygous diploid African cassava cultivar reveal novel pan-genome and allele-specific transcriptome features
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    ncbi.nlm.nih.gov/pmc/articles/PMC8952263/
  58. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly, annotation, and phylogenomics of the gooseneck barnacle Pollicipes pollicipes
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    ncbi.nlm.nih.gov/pmc/articles/PMC8917513/
  59. Feb 2022
  60. f1000research.com f1000research.com
    F1000Research Article: NIFtHool: an informatics program for identification of NifH proteins using deep neural networks.
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    f1000research.com/articles/11-164
  61. Jan 2022
  62. academic.oup.com academic.oup.com
    Large-scale phylogenomic analysis resolves a backbone phylogeny in ferns
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    academic.oup.com/gigascience/article/7/2/gix116/4656250
  63. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Highly diverged lineages of Saccharomyces paradoxus in temperate to subtropical climate zones in China
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    onlinelibrary.wiley.com/doi/10.1002/yea.3688
  64. Oct 2021
  65. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    On the diversity of F420 ‐dependent oxidoreductases: A sequence‐ and structure‐based classification
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    ncbi.nlm.nih.gov/pmc/articles/PMC8518648/
  66. Aug 2021
  67. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The lost world of Cuatro Ciénegas Basin, a relictual bacterial niche in a desert oasis
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    ncbi.nlm.nih.gov/pmc/articles/PMC6245727/
  68. www.sciencedirect.com www.sciencedirect.com
    A Novel Eukaryotic Denitrification Pathway in Foraminifera
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    sciencedirect.com/science/article/pii/S0960982218308182
  69. Jul 2021
  70. www.sciencedirect.com www.sciencedirect.com
    A Novel Eukaryotic Denitrification Pathway in Foraminifera
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    sciencedirect.com/science/article/pii/S0960982218308182
  71. Mar 2021
  72. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Mitochondrial copper and phosphate transporter specificity was defined early in the evolution of eukaryotes
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    ncbi.nlm.nih.gov/pmc/articles/PMC7924939/
  73. Feb 2021
  74. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Proteomics reveals synergy between biomass degrading enzymes and inorganic Fenton chemistry in leaf-cutting ant colonies
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    ncbi.nlm.nih.gov/pmc/articles/PMC7877906/
  75. academic.oup.com academic.oup.com
    A microbial gene catalog of anaerobic digestion from full-scale biogas plants
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    academic.oup.com/gigascience/article/10/1/giaa164/6121636
  76. Oct 2020
  77. academic.oup.com academic.oup.com
    IDseq—An open source cloud-based pipeline and analysis service for metagenomic pathogen detection and monitoring
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    academic.oup.com/gigascience/article/9/10/giaa111/5918865
  78. Sep 2020
  79. academic.oup.com academic.oup.com
    Connections between the human gut microbiome and gestational diabetes mellitus
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    academic.oup.com/gigascience/article/6/8/gix058/4056270
  80. www.sciencedirect.com www.sciencedirect.com
    Functional and Genomic Variation between Human-Derived Isolates of Lachnospiraceae Reveals Inter- and Intra-Species Diversity
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    sciencedirect.com/science/article/pii/S1931312820302870
  81. Jan 2020
  82. academic.oup.com academic.oup.com
    An integrated respiratory microbial gene catalogue to better understand the microbial aetiology of Mycoplasma pneumoniae pneumonia
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    academic.oup.com/gigascience/article/8/8/giz093/5542322
  83. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    GraphClust2: Annotation and discovery of structured RNAs with scalable and accessible integrative clustering
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    ncbi.nlm.nih.gov/pmc/articles/PMC6897289/
  84. academic.oup.com academic.oup.com
    De novo genome assembly of the endangered Acer yangbiense , a plant species with extremely small populations endemic to Yunnan Province, China
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    academic.oup.com/gigascience/article/8/7/giz085/5532406
  85. www.sciencedirect.com www.sciencedirect.com
    Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome
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    sciencedirect.com/science/article/pii/S009286741931164X
  86. www.sciencedirect.com www.sciencedirect.com
    A Pathogen-Responsive Gene Cluster for Highly Modified Fatty Acids in Tomato
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    sciencedirect.com/science/article/pii/S0092867419313224
  87. academic.oupdev.silverchair.com academic.oupdev.silverchair.com
    Disordered gut microbiota and alterations in metabolic patterns are associated with atrial fibrillation
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    academic.oupdev.silverchair.com/gigascience/article/8/6/giz058/5506812
  88. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
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    ncbi.nlm.nih.gov/pmc/articles/PMC6377399/
  89. Nov 2018
  90. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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    ncbi.nlm.nih.gov/pmc/articles/PMC6177736/
  91. academic.oup.com academic.oup.com
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    academic.oup.com/gigascience/article/7/10/giy107/5091799
  92. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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    ncbi.nlm.nih.gov/pmc/articles/PMC6137240/
  93. academic.oup.com academic.oup.com
    Establishment of a Macaca fascicularis gut microbiome gene catalog and comparison with the human, pig, and mouse gut microbiomes
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    academic.oup.com/gigascience/article/7/9/giy100/5076037
  94. www.sciencedirect.com www.sciencedirect.com
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    sciencedirect.com/science/article/pii/S0960982218308650
  95. academic.oup.com academic.oup.com
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    academic.oup.com/gigascience/article/7/4/giy034/4958981
  96. academic.oup.com academic.oup.com
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    academic.oup.com/gigascience/article/7/2/1/4656250
  97. europepmc.org europepmc.org
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    europepmc.org/articles/PMC5603765/
  98. europepmc.org europepmc.org
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    europepmc.org/articles/PMC5597849/
  99. Nov 2017
  100. academic.oup.com academic.oup.com
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    academic.oup.com/gigascience/article/6/9/1/4077042/The-draft-genome-sequence-of-a-desert-tree-Populus
  101. www.sciencedirect.com www.sciencedirect.com
    A Phylogenomic Solution to the Origin of Insects by Resolving Crustacean-Hexapod Relationships
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    sciencedirect.com/science/article/pii/S0960982217305766
  102. www.sciencedirect.com www.sciencedirect.com
    Domestication and Divergence of Saccharomyces cerevisiae Beer Yeasts
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    sciencedirect.com/science/article/pii/S0092867416310716