78 Matching Annotations
  1. Last 7 days
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    LCPBert: ProtBERT-based early-stage lung cancer prediction from T cell receptor beta sequences
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    pmc.ncbi.nlm.nih.gov/articles/PMC13098609/
  3. Mar 2026
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    Mutation elevation and functional alterations in Escherichia coli are pertinent to the onset of gestational diabetes mellitus
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    sciencedirect.com/science/article/pii/S2211124726002214
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    Stepwise evolutionary transitions in Cladophorales plastid genomes reveal origins of hairpin chromosomes
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    sciencedirect.com/science/article/pii/S0960982226002253
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    First draft genome of the decaploid species, Ludwigia grandiflora subsp. hexapetala, validated through gene expression
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    biorxiv.org/content/10.64898/2026.03.09.710498v1
  7. Feb 2026
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    Comparison of gut virome in Kenyan infants born to women with and without HIV
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    Livestock aggregated samples for monitoring viruses infecting animals and potentially zoonotic viral pathogens
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    Improved reference assembly and core collection re-sequencing to facilitate exploration of important agronomical traits for the improvement of oilseed crop, Carthamus tinctorius L.
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  11. Dec 2025
  12. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Chromosome-level assemblies of two hexaploid bamboos Thyrsostachys oliveri and Thyrsostachys siamensis provide a foundation for functional and comparative genomics studies
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  13. Oct 2025
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    Proteome mining of Yersinia Enterocolitica for drug targets and computational inhibitor identification with ADMET, anti-inflammation potential and formulation characteristics
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  15. Aug 2025
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    A unified cell atlas of vascular plants reveals cell-type foundational genes and accelerates gene discovery
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    sciencedirect.com/science/article/pii/S009286742500858X
  17. Jul 2025
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    Dissecting FAP+ Cell Diversity in Pancreatic Cancer Uncovers an Interferon-Response Subtype of Cancer-Associated Fibroblasts with Tumor-Restraining Properties
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  19. Jun 2025
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    A draft genome assembly for the dart-poison frog Phyllobates terribilis
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    gigabytejournal.com/articles/157
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    Repeated duplications and losses shaped SMC complex evolution from archaeal ancestors to modern eukaryotes
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  23. May 2025
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    Repeatome diversity in sea anemone genomics (Cnidaria: Actiniaria) based on the Actiniaria-REPlib library
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    Telomere-to-telomere genome of common bean (Phaseolus vulgaris L., YP4)
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    dx.doi.org/10.1093/gigascience/giaf001
  26. Apr 2025
  27. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Constructing a draft Indian cattle pangenome using short-read sequencing
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  28. Mar 2025
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    Lineage-Specific Class-A GPCR Dynamics Reflect Diverse Chemosensory Adaptations in Lophotrochozoa
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    Microbial dysbiosis with tryptophan metabolites alteration in lower respiratory tract is associated with clinical responses to anti-PD-1 immunotherapy in advanced non-small cell lung cancer
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    link.springer.com/article/10.1007/s00262-025-03996-3
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    Benchmarking short-read metagenomics tools for removing host contamination
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  32. Jan 2025
  33. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Diaci v3.0: chromosome-level assembly, de novo transcriptome, and manual annotation of Diaphorina citri, insect vector of Huanglongbing
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    pmc.ncbi.nlm.nih.gov/articles/PMC11659978/
  34. Aug 2024
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    Exploring Waterborne Viruses in Groundwater: Quantification and Virome Characterization via Passive Sampling and Targeted Enrichment Sequencing
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    A trade-off in evolution: the adaptive landscape of spiders without venom glands
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  37. Jul 2024
  38. www.biorxiv.org www.biorxiv.org
    Evolutionary Dynamics of Lineage-Specific Class-A GPCR Subsets Reveal Widespread Chemosensory Roles and Adaptations in Lophotrochozoa
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    biorxiv.org/content/10.1101/2024.07.14.603414v1
  39. Apr 2024
  40. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Large-scale genomic survey with deep learning-based method reveals strain-level phage specificity determinants
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    Staphylococcus aureus skin colonization is mediated by SasG lectin variation
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  42. Mar 2024
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Transcriptome-informed identification and characterisation of Planococcus citri cis- and trans-isoprenyl diphosphate synthase genes
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    Quantitative proteome dynamics across embryogenesis in a model chordate
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    Peripheral neuronal activation shapes the microbiome and alters gut physiology
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  46. Feb 2024
  47. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Wastewater-based epidemiology applied at the building-level reveals distinct virome profiles based on the age of the contributing individuals
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  48. Oct 2023
  49. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The chromosome-level genome of Chinese praying mantis Tenodera sinensis (Mantodea: Mantidae) reveals its biology as a predator
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    Chromosome-level genome of the venomous snail Kalloconus canariensis: a valuable model for venomics and comparative genomics
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    ncbi.nlm.nih.gov/pmc/articles/PMC10541794/
  51. Sep 2023
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    Thermophilic methane oxidation is widespread in Aotearoa-New Zealand geothermal fields
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    Maize heat shock proteins—prospection, validation, categorization and in silico analysis of the different ZmHSP families
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    link.springer.com/article/10.1007/s44154-023-00104-2
  54. Mar 2023
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    Design of a stabilized RBD enables potently neutralizing SARS-CoV-2 single-component nanoparticle vaccines
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    Effectiveness of passive sampling for the detection and genetic characterization of human viruses in wastewater
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    A chromosome-scale draft genome sequence of horsegram (Macrotyloma uniflorum)
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650294/
  58. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Sex-based de novo transcriptome assemblies of the parasitoid wasp Encarsia suzannae, a host of the manipulative heritable symbiont Cardinium hertigii
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  59. Feb 2023
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    A chromosome-level genome assembly of Ostrea denselamellosa provides initial insights into its evolution
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    Chromosome-level genome assembly of goose provides insight into the adaptation and growth of local goose breeds
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  62. Jan 2023
  63. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Resistance to white spot syndrome virus in the European shore crab is associated with suppressed virion trafficking and heightened immune responses
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  64. Nov 2022
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    Improved microbial genomes and gene catalog of the chicken gut from metagenomic sequencing of high-fidelity long reads
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac116/6833030
  66. Sep 2022
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    Genomic analysis reveals cryptic diversity in aphelids and sheds light on the emergence of Fungi
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  68. May 2022
  69. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level reference genome of Ensete glaucum gives insight into diversity and chromosomal and repetitive sequence evolution in the Musaceae
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    ncbi.nlm.nih.gov/pmc/articles/PMC9055855/
  70. Mar 2022
  71. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The haplotype-resolved chromosome pairs of a heterozygous diploid African cassava cultivar reveal novel pan-genome and allele-specific transcriptome features
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    Chromosome-level genome assembly, annotation, and phylogenomics of the gooseneck barnacle Pollicipes pollicipes
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    ncbi.nlm.nih.gov/pmc/articles/PMC8917513/
  73. Feb 2022
  74. f1000research.com f1000research.com
    F1000Research Article: NIFtHool: an informatics program for identification of NifH proteins using deep neural networks.
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  75. Jan 2022
  76. academic.oup.com academic.oup.com
    Large-scale phylogenomic analysis resolves a backbone phylogeny in ferns
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    Highly diverged lineages of Saccharomyces paradoxus in temperate to subtropical climate zones in China
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    onlinelibrary.wiley.com/doi/10.1002/yea.3688
  78. Oct 2021
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    On the diversity of F420 ‐dependent oxidoreductases: A sequence‐ and structure‐based classification
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  80. Aug 2021
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    The lost world of Cuatro Ciénegas Basin, a relictual bacterial niche in a desert oasis
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    A Novel Eukaryotic Denitrification Pathway in Foraminifera
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  83. Jul 2021
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    A Novel Eukaryotic Denitrification Pathway in Foraminifera
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  85. Mar 2021
  86. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Mitochondrial copper and phosphate transporter specificity was defined early in the evolution of eukaryotes
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  87. Feb 2021
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    Proteomics reveals synergy between biomass degrading enzymes and inorganic Fenton chemistry in leaf-cutting ant colonies
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    A microbial gene catalog of anaerobic digestion from full-scale biogas plants
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    academic.oup.com/gigascience/article/10/1/giaa164/6121636
  90. Oct 2020
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    IDseq—An open source cloud-based pipeline and analysis service for metagenomic pathogen detection and monitoring
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  92. Sep 2020
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    Connections between the human gut microbiome and gestational diabetes mellitus
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    Functional and Genomic Variation between Human-Derived Isolates of Lachnospiraceae Reveals Inter- and Intra-Species Diversity
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  95. Jan 2020
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    An integrated respiratory microbial gene catalogue to better understand the microbial aetiology of Mycoplasma pneumoniae pneumonia
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    GraphClust2: Annotation and discovery of structured RNAs with scalable and accessible integrative clustering
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    ncbi.nlm.nih.gov/pmc/articles/PMC6897289/
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    De novo genome assembly of the endangered Acer yangbiense , a plant species with extremely small populations endemic to Yunnan Province, China
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    Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome
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    A Pathogen-Responsive Gene Cluster for Highly Modified Fatty Acids in Tomato
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    Disordered gut microbiota and alterations in metabolic patterns are associated with atrial fibrillation
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  103. Nov 2018
  104. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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    Establishment of a Macaca fascicularis gut microbiome gene catalog and comparison with the human, pig, and mouse gut microbiomes
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    academic.oup.com/gigascience/article/7/9/giy100/5076037
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  113. Nov 2017
  114. academic.oup.com academic.oup.com
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    academic.oup.com/gigascience/article/6/9/1/4077042/The-draft-genome-sequence-of-a-desert-tree-Populus
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    A Phylogenomic Solution to the Origin of Insects by Resolving Crustacean-Hexapod Relationships
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    sciencedirect.com/science/article/pii/S0960982217305766
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    Domestication and Divergence of Saccharomyces cerevisiae Beer Yeasts
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    sciencedirect.com/science/article/pii/S0092867416310716