71 Matching Annotations
  1. Nov 2024
  2. pubs.acs.org pubs.acs.org
    Identification of Key Genes Controlling Sugar and Organic Acid Accumulation in Wampee Fruit (Clausena lansium) via Genome Assembly and Genome-wide Association Analysis
    1
    1. scibot 29 Nov 2024
      RRID: SCR 007839

      DOI: 10.1021/acs.jafc.4c04830

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    pubs.acs.org/doi/10.1021/acs.jafc.4c04830
  3. Jun 2024
  4. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The telomere-to-telomere (T2T) genome of Peucedanum praeruptorum Dunn provides insights into the genome evolution and coumarin biosynthesis
    1
    1. scibot 08 Jun 2024
      RRID:SCR_007839

      DOI: 10.1093/gigascience/giae025

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    ncbi.nlm.nih.gov/pmc/articles/PMC11152176/
  5. Dec 2023
  6. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of the Pacific geoduck Panopea generosa reveals major inter- and intrachromosomal rearrangements and substantial expansion of the copine gene family
    1
    1. scibot 21 Dec 2023
      RRID:SCR_007839

      DOI: 10.1093/gigascience/giad105

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    ncbi.nlm.nih.gov/pmc/articles/PMC10729735/
  7. Oct 2023
  8. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level reference genome of tetraploid Isoetes sinensis provides insights into evolution and adaption of lycophytes
    1
    1. scibot 05 Oct 2023
      RRID:SCR_007839

      DOI: 10.1093/gigascience/giad079

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    ncbi.nlm.nih.gov/pmc/articles/PMC10541799/
  9. Sep 2023
  10. www.sciencedirect.com www.sciencedirect.com
    Characterization of the male-specific region containing the candidate sex-determining gene in Amur catfish (Silurus asotus) using third-generation- and pool-sequencing data
    1
    1. scibot 27 Sep 2023
      RRID:SCR_007839

      DOI: 10.1016/j.ijbiomac.2023.125908

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    sciencedirect.com/science/article/pii/S0141813023028039
  11. Jun 2023
  12. www.sciencedirect.com www.sciencedirect.com
    Evolutionary analysis of cellular reduction and anaerobicity in the hyper-prevalent gut microbe Blastocystis
    1
    1. scibot 02 Jun 2023
      RRID:SCR_007839

      DOI: 10.1016/j.cub.2023.05.025

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    sciencedirect.com/science/article/pii/S0960982223006206
  13. Apr 2023
  14. academic.oup.com academic.oup.com
    GEN-ERA toolbox: unified and reproducible workflows for research in microbial genomics
    1
    1. scibot 11 Apr 2023
      RRID:SCR_007839

      DOI: 10.1093/gigascience/giad022

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad022/7111624
  15. Jan 2023
  16. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome-level genome assembly of Dastarcus helophoroides provides insights into CYP450 genes expression upon insecticide exposure
    1
    1. scibot 10 Jan 2023
      RRID:SCR_007839

      DOI: 10.1002/ps.7319

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    onlinelibrary.wiley.com/doi/10.1002/ps.7319
  17. Nov 2022
  18. academic.oup.com academic.oup.com
    The whole-genome assembly of an endangered Salicaceae species: Chosenia arbutifolia (Pall.) A. Skv
    1
    1. scibot 17 Nov 2022
      RRID:SCR_007839

      DOI: 10.1093/gigascience/giac109

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac109/6827246
  19. Sep 2022
  20. academic.oup.com academic.oup.com
    Comparative genome and evolution analyses of an endangered stony coral species Dendrophyllia cribrosa near Dokdo Islands in the East Sea
    1
    1. scibot 17 Sep 2022
      RRID:SCR_007839

      DOI: 10.1093/gbe/evac132

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    academic.oup.com/gbe/article/14/9/evac132/6677079
  21. Jul 2022
  22. academic.oup.com academic.oup.com
    Chromosome-Level Genome Assembly of the Butter Clam Saxidomus purpuratus
    1
    1. scibot 30 Jul 2022
      RRID:SCR_007839

      DOI: 10.1093/gbe/evac106

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    academic.oup.com/gbe/article/14/7/evac106/6650251
  23. May 2022
  24. academic.oup.com academic.oup.com
    Chromosome‐level genome assembly of the black widow spider Latrodectus elegans illuminates composition and evolution of venom and silk proteins
    1
    1. scibot 28 May 2022
      RRID:SCR_007839

      DOI: 10.1093/gigascience/giac049

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac049/6593146
  25. Jan 2022
  26. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of the shuttles hoppfish, Periophthalmus modestus
    1
    1. scibot 15 Jan 2022
      RRID:SCR_007839

      DOI: 10.1093/gigascience/giab089

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giab089/6505119
  27. Dec 2021
  28. academic.oup.com academic.oup.com
    A high-resolution genome of an euryhaline and eurythermal rhinogoby (Rhinogobius similis Gill 1895)
    1
    1. scibot 01 Dec 2021
      RRID:SCR_007839

      DOI: 10.1093/g3journal/jkab395

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    academic.oup.com/g3journal/advance-article/doi/10.1093/g3journal/jkab395/6430980
  29. Sep 2021
  30. www.nature.com www.nature.com
    The genome of the thin-necked bladder worm Taenia hydatigena reveals evolutionary strategies for helminth survival
    1
    1. scibot 04 Sep 2021
      RRID:SCR_007839

      DOI: 10.1038/s42003-021-02536-w

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    nature.com/articles/s42003-021-02536-w
  31. Aug 2021
  32. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Pseudomolecule-level assembly of the Chinese oil tree yellowhorn (Xanthoceras sorbifolium) genome
    1
    1. scibot 14 Aug 2021
      RRID:SCR_007839

      DOI: 10.1093/gigascience/giz070

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    ncbi.nlm.nih.gov/pmc/articles/PMC6593361/
  33. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genome assembly and annotation of yellowhorn (Xanthoceras sorbifolium Bunge)
    1
    1. scibot 14 Aug 2021
      RRID:SCR_007839

      DOI: 10.1093/gigascience/giz071

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    ncbi.nlm.nih.gov/pmc/articles/PMC6593362/
  34. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
    1
    1. scibot 12 Aug 2021
      RRID:SCR_007839

      DOI: 10.1093/gigascience/giy031

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    ncbi.nlm.nih.gov/pmc/articles/PMC5905365/
  35. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
    1
    1. scibot 11 Aug 2021
      RRID:SCR_007839

      DOI: 10.1093/gigascience/giy051

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    ncbi.nlm.nih.gov/pmc/articles/PMC5967522/
  36. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
    1
    1. scibot 10 Aug 2021
      RRID:SCR_007839

      DOI: 10.1093/gigascience/giy143

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    ncbi.nlm.nih.gov/pmc/articles/PMC6302954/
  37. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome‐level assembly of Southern catfish (Silurus meridionalis) provides insights into visual adaptation to the nocturnal and benthic lifestyles
    1
    1. scibot 04 Aug 2021
      RRID:SCR_007839

      DOI: 10.1111/1755-0998.13338

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    onlinelibrary.wiley.com/doi/10.1111/1755-0998.13338
  38. academic.oup.com academic.oup.com
    Untitled document
    1
    1. scibot 01 Aug 2021
      RRID:SCR_007839

      DOI: 10.1093/gigascience/gix093

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    academic.oup.com/gigascience/article/6/11/gix093/4345651
  39. academic.oup.com academic.oup.com
    Untitled document
    1
    1. scibot 01 Aug 2021
      RRID:SCR_007839

      DOI: 10.1093/gigascience/giy143

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    academic.oup.com/gigascience/article/7/12/giy143/5202446
  40. Jul 2021
  41. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
    1
    1. scibot 31 Jul 2021
      RRID:SCR_007839

      DOI: 10.1093/gigascience/gix093

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    ncbi.nlm.nih.gov/pmc/articles/PMC5710592/
  42. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A molecular portrait of maternal sepsis from Byzantine Troy
    2
    1. scibot 27 Jul 2021
      SCR_007839

      DOI: 10.7554/eLife.20983

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

      Curator: @gabimpine

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      RRIDCUR:Validated RRIDCUR:Duplicate RRID:SCR_007839
    2. scibot 27 Jul 2021
      SCR_007839

      DOI: 10.7554/eLife.20983

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

      Curator: @gabimpine

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    ncbi.nlm.nih.gov/pmc/articles/PMC5224923/
  43. May 2021
  44. onlinelibrary.wiley.com onlinelibrary.wiley.com
    The Meishan pig genome reveals structural variation mediated gene expression and phenotypic divergence underlying Asian pig domestication
    1
    1. scibot 11 May 2021
      RRID:SCR_007839

      DOI: 10.1111/1755-0998.13396

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    onlinelibrary.wiley.com/doi/10.1111/1755-0998.13396
  45. Apr 2021
  46. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of the hard-shelled mussel Mytilus coruscus, a widely distributed species from the temperate areas of East Asia
    1
    1. scibot 27 Apr 2021
      RRID:SCR_007839

      DOI: 10.1093/gigascience/giab024

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    academic.oup.com/gigascience/article/10/4/giab024/6247647
  47. academic.oup.com academic.oup.com
    A chromosome-level reference genome of the hazelnut, Corylus heterophylla Fisch
    1
    1. scibot 24 Apr 2021
      RRID:SCR_007839

      DOI: 10.1093/gigascience/giab027

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    academic.oup.com/gigascience/article/10/4/giab027/6237163
  48. Jan 2021
  49. link.springer.com link.springer.com
    The hard clam genome reveals massive expansion and diversification of inhibitors of apoptosis in Bivalvia
    1
    1. scibot 28 Jan 2021
      RRID:SCR_007839

      DOI: 10.1186/s12915-020-00943-9

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    link.springer.com/article/10.1186/s12915-020-00943-9
  50. Dec 2020
  51. academic.oup.com academic.oup.com
    Chromosomal genome of Triplophysa bleekeri provides insights into its evolution and environmental adaptation
    1
    1. scibot 07 Dec 2020
      RRID:SCR_007839

      DOI: 10.1093/gigascience/giaa132

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    academic.oup.com/gigascience/article/9/11/giaa132/5999722
  52. Oct 2020
  53. academic.oup.com academic.oup.com
    Pacific Biosciences assembly with Hi-C mapping generates an improved, chromosome-level goose genome
    1
    1. scibot 30 Oct 2020
      RRID:SCR_007839

      DOI: 10.1093/gigascience/giaa114

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    academic.oup.com/gigascience/article/9/10/giaa114/5938995
  54. Sep 2020
  55. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    From the Inside Out: an Epibiotic Bdellovibrio Predator with an Expanded Genomic Complement
    1
    1. scibot 29 Sep 2020
      RRID:SCR_007839

      DOI: 10.1128/JB.00565-19

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

      Curator: @evieth

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    ncbi.nlm.nih.gov/pmc/articles/PMC7099131/
  56. academic.oup.com academic.oup.com
    Chromosome-level reference genome of the jellyfish Rhopilema esculentum
    1
    1. scibot 26 Sep 2020
      RRID:SCR_007839

      DOI: 10.1093/gigascience/giaa036

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

      Curator: @ethanbadger

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    academic.oup.com/gigascience/article/9/4/giaa036/5823175
  57. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of Aldrichina grahami , a forensically important blowfly
    1
    1. scibot 26 Sep 2020
      RRID:SCR_007839

      DOI: 10.1093/gigascience/giaa020

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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      RRIDCUR:Validated RRID:SCR_007839
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    academic.oup.com/gigascience/article/9/3/giaa020/5810243
  58. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of the female western mosquitofish ( Gambusia affinis )
    1
    1. scibot 23 Sep 2020
      RRID:SCR_007839

      DOI: 10.1093/gigascience/giaa092

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    academic.oup.com/gigascience/article/9/8/giaa092/5897807
  59. academic.oup.com academic.oup.com
    The chromosome-level draft genome of Dalbergia odorifera
    1
    1. scibot 23 Sep 2020
      RRID:SCR_007839

      DOI: 10.1093/gigascience/giaa084

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

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    academic.oup.com/gigascience/article/9/8/giaa084/5893771
  60. www.microbiologyresearch.org www.microbiologyresearch.org
    Mycoparasitism illuminated by genome and transcriptome sequencing of Coniothyrium minitans, an important biocontrol fungus of the plant pathogen Sclerotinia sclerotiorum
    1
    1. scibot 17 Sep 2020
      RRID:SCR_007839

      DOI: 10.1099/mgen.0.000345

      Resource: OrthoMCL DB: Ortholog Groups of Protein Sequences (RRID:SCR_007839)

      Curator: @Naa003

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  61. academic.oup.com academic.oup.com
    Genome sequence of the agarwood tree Aquilaria sinensis (Lour.) Spreng: the first chromosome-level draft genome in the Thymelaeceae family
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      DOI: 10.1093/gigascience/giaa013

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  62. academic.oup.com academic.oup.com
    Chromosome-level genome assembly and annotation of the loquat ( Eriobotrya japonica ) genome
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      DOI: 10.1093/gigascience/giaa015

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  63. academic.oup.com academic.oup.com
    Chromosomal-level assembly of Juglans sigillata genome using Nanopore, BioNano, and Hi-C analysis
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      DOI: 10.1093/gigascience/giaa006

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  64. Jan 2020
  65. journals.plos.org journals.plos.org
    Chromulinavorax destructans, a pathogen of microzooplankton that provides a window into the enigmatic candidate phylum Dependentiae
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      DOI: 10.1371/journal.ppat.1007801

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  66. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Whole-genome sequencing and analysis of the Chinese herbal plant Gelsemium elegans
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      DOI: 10.1016/j.apsb.2019.08.004

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  67. academic.oup.com academic.oup.com
    De novo genome assembly of the endangered Acer yangbiense , a plant species with extremely small populations endemic to Yunnan Province, China
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      DOI: 10.1093/gigascience/giz085

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  68. academic.oup.com academic.oup.com
    Chromosomal-level reference genome of Chinese peacock butterfly ( Papilio bianor ) based on third-generation DNA sequencing and Hi-C analysis
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      DOI: 10.1093/gigascience/giz128

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  69. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome‐level genome assembly of the razor clam Sinonovacula constricta (Lamarck, 1818)
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      DOI: 10.1111/1755-0998.13086

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  70. academic.oup.com academic.oup.com
    Draft genome sequence of Solanum aethiopicum provides insights into disease resistance, drought tolerance, and the evolution of the genome
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      DOI: 10.1093/gigascience/giz115

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  71. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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      DOI: 10.1093/gigascience/giy127

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  72. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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      DOI: 10.1093/gigascience/giy164

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  73. academic.oup.com academic.oup.com
    The genomic basis for colonizing the freezing Southern Ocean revealed by Antarctic toothfish and Patagonian robalo genomes
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      DOI: 10.1093/gigascience/giz016

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  74. Nov 2018
  75. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  76. academic.oup.com academic.oup.com
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  77. academic.oup.com academic.oup.com
    Improved de novo genome assembly and analysis of the Chinese cucurbit Siraitia grosvenorii, also known as monk fruit or luo-han-guo
    1
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  78. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  79. academic.oup.com academic.oup.com
    De novo genome assembly of the red silk cotton tree (Bombax ceiba)
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  80. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  81. academic.oup.com academic.oup.com
    Whole-Genome De Novo sequencing reveals unique genes that contributed to the adaptive evolution of the mikado pheasant
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  82. academic.oup.com academic.oup.com
    Single-molecule, full-length transcript sequencing provides insight into the extreme metabolism of the ruby-throated hummingbird Archilochus colubris
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  83. academic.oup.com academic.oup.com
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  84. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Draft genome of the protandrous Chinese black porgy, Acanthopagrus schlegelii
    1
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  85. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  86. europepmc.org europepmc.org
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  87. elifesciences.org elifesciences.org
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  88. europepmc.org europepmc.org
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  89. europepmc.org europepmc.org
    Draft genome of the reindeer (Rangifer tarandus).
    1
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  90. academic.oup.com academic.oup.com
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  91. academic.oup.com academic.oup.com
    Panax ginseng genome examination for ginsenoside biosynthesis
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  92. europepmc.org europepmc.org
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  93. academic.oup.com academic.oup.com
    The draft genome assembly of Rhododendron delavayi Franch. var. delavayi
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  94. Nov 2017
  95. academic.oup.com academic.oup.com
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  96. www.sciencedirect.com www.sciencedirect.com
    The CEP19-RABL2 GTPase Complex Binds IFT-B to Initiate Intraflagellar Transport at the Ciliary Base
    1
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