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61 Matching Annotations

Jul 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

A telomere-to-telomere gapless genome reveals SlPRR1 control of circadian rhythm and photoperiodic flowering in tomato

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1. scibot 04 Jul 2025
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giaf058
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12218202/
May 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

The haplotype-resolved T2T genome for Bauhinia × blakeana sheds light on the genetic basis of flower heterosis

1
1. scibot 19 May 2025
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giaf044
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12012898/
Feb 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

The telomere-to-telomere genome of flowering cherry (Prunus campanulata) reveals genomic evolution of the subgenus Cerasus

1
1. scibot 26 Feb 2025
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giaf009
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11843098/
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Enhancing inbreeding estimation and global conservation insights through chromosome-level assemblies of the Chinese and Malayan pangolin

1
1. scibot 15 Feb 2025
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giaf003
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11825179/
Jan 2025
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A chromosome-scale genome assembly of the pioneer plant Stylosanthes angustifolia: insights into genome evolution and drought adaptation

1
1. scibot 29 Jan 2025
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giae118
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11758145/
Dec 2024
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The chromosome-level genome assembly of an endangered herb Bergenia scopulosa provides insights into local adaptation and genomic vulnerability under climate change

1
1. scibot 21 Dec 2024
  
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  SCR_007891
  
  DOI: 10.1093/gigascience/giae091
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11604060/
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Construction and analysis of telomere-to-telomere genomes for 2 sweet oranges: Longhuihong and Newhall (Citrus sinensis)

1
1. scibot 21 Dec 2024
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giae084
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11590112/
Sep 2024
academic.oup.com academic.oup.com

The draft genomes of five agriculturally important African orphan crops

1
1. scibot 25 Sep 2024
  
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  RRID:SCR_004276
  
  DOI: 10.1093/gigascience/giy152
  
  Resource: Nevada Donor Network, Inc. (RRID:SCR_004276)
  
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academic.oup.com/gigascience/article/8/3/giy152/5232229
Aug 2024
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

A trade-off in evolution: the adaptive landscape of spiders without venom glands

1
1. scibot 19 Aug 2024
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giae048
  
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ncbi.nlm.nih.gov/pmc/articles/PMC11299198/
onlinelibrary.wiley.com onlinelibrary.wiley.com

Chronic methamphetamine regulates the expression of MicroRNAs and putative target genes in the nucleus accumbens of mice

1
1. scibot 02 Aug 2024
  
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  nif-0000-03402
  
  DOI: 10.1002/jnr.23605
  
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  RRID:SCR_007891 RRIDCUR:Validated
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onlinelibrary.wiley.com/doi/10.1002/jnr.23605/full
Jun 2024
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

The genomes of Dahlia pinnata, Cosmos bipinnatus, and Bidens alba in tribe Coreopsideae provide insights into polyploid evolution and inulin biosynthesis

1
1. scibot 22 Jun 2024
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giae032
  
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ncbi.nlm.nih.gov/pmc/articles/PMC11170221/
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

The telomere-to-telomere (T2T) genome of Peucedanum praeruptorum Dunn provides insights into the genome evolution and coumarin biosynthesis

1
1. scibot 08 Jun 2024
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giae025
  
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ncbi.nlm.nih.gov/pmc/articles/PMC11152176/
Oct 2023
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Chromosome-level reference genome of tetraploid Isoetes sinensis provides insights into evolution and adaption of lycophytes

1
1. scibot 05 Oct 2023
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giad079
  
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ncbi.nlm.nih.gov/pmc/articles/PMC10541799/
Sep 2023
www.sciencedirect.com www.sciencedirect.com

Characterization of the male-specific region containing the candidate sex-determining gene in Amur catfish (Silurus asotus) using third-generation- and pool-sequencing data

1
1. scibot 27 Sep 2023
  
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  RRID:SCR_007891
  
  DOI: 10.1016/j.ijbiomac.2023.125908
  
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sciencedirect.com/science/article/pii/S0141813023028039
Jun 2023
www.sciencedirect.com www.sciencedirect.com

Evolutionary analysis of cellular reduction and anaerobicity in the hyper-prevalent gut microbe Blastocystis

1
1. scibot 02 Jun 2023
  
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  RRID:SCR_007891
  
  DOI: 10.1016/j.cub.2023.05.025
  
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sciencedirect.com/science/article/pii/S0960982223006206
Mar 2023
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Chromosome-level assembly of the common vetch (Vicia sativa) reference genome

1
1. scibot 02 Mar 2023
  
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  RRID:SCR_007891
  
  DOI: 10.46471/gigabyte.38
  
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ncbi.nlm.nih.gov/pmc/articles/PMC9650280/
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

A chromosome-level genome assembly and annotation of the maize elite breeding line Dan340

1
1. scibot 02 Mar 2023
  
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  RRID:SCR_007891
  
  DOI: 10.46471/gigabyte.63
  
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ncbi.nlm.nih.gov/pmc/articles/PMC9694154/
Feb 2023
www.mdpi.com www.mdpi.com

Genome Assembly and Comparative Analysis of the Egg Parasitoid Wasp Trichogramma dendrolimi Shed Light on the Composition and Evolution of Olfactory Receptors and Venoms

1
1. scibot 04 Feb 2023
  
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  RRID:SCR_007891
  
  DOI: 10.3390/insects14020144
  
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mdpi.com/2075-4450/14/2/144
Jan 2023
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Resistance to white spot syndrome virus in the European shore crab is associated with suppressed virion trafficking and heightened immune responses

1
1. scibot 15 Jan 2023
  
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  SCR_007891
  
  DOI: 10.3389/fimmu.2022.1057421
  
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ncbi.nlm.nih.gov/pmc/articles/PMC9831657/
Dec 2022
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Near-chromosomal de novo assembly of Bengal tiger genome reveals genetic hallmarks of apex predation

1
1. scibot 30 Dec 2022
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giac112
  
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ncbi.nlm.nih.gov/pmc/articles/PMC9795480/
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

A Chromosome-level assembly of the Japanese eel genome, insights into gene duplication and chromosomal reorganization

1
1. scibot 16 Dec 2022
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giac120
  
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ncbi.nlm.nih.gov/pmc/articles/PMC9730501/
Nov 2022
academic.oup.com academic.oup.com

The whole-genome assembly of an endangered Salicaceae species: Chosenia arbutifolia (Pall.) A. Skv

1
1. scibot 17 Nov 2022
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giac109
  
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academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac109/6827246
academic.oup.com academic.oup.com

Capparis spinosa var. herbacea genome provides the first genomic instrument for a diversity and evolution study of the Capparaceae family

1
1. scibot 03 Nov 2022
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giac106
  
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academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac106/6780308
Oct 2022
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Chromosome-level genome assembly for the Aldabra giant tortoise enables insights into the genetic health of a threatened population

1
1. scibot 26 Oct 2022
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giac090
  
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ncbi.nlm.nih.gov/pmc/articles/PMC9553416/
Jul 2022
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Chromosome-level assembly and annotation of the blue catfish Ictalurus furcatus, an aquaculture species for hybrid catfish reproduction, epigenetics, and heterosis studies

1
1. scibot 14 Jul 2022
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giac070
  
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ncbi.nlm.nih.gov/pmc/articles/PMC9270728/
academic.oup.com academic.oup.com

Manchurian Walnut Genome: Insights into Juglone and Lipid Biosynthesis

1
1. scibot 06 Jul 2022
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giac057
  
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academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac057/6619298
www.sciencedirect.com www.sciencedirect.com

Bacteria reduce flagellin synthesis to evade microglia-astrocyte-driven immunity in the brain

1
1. scibot 06 Jul 2022
  
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  RRID:SCR_007891
  
  DOI: 10.1016/j.celrep.2022.111033
  
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sciencedirect.com/science/article/pii/S2211124722008270
Jun 2022
academic.oup.com academic.oup.com

A chromosome-level genome assembly of Artocarpus nanchuanensis (Moraceae), an extremely endangered fruit tree

1
1. scibot 17 Jun 2022
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giac042
  
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academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac042/6608506
May 2022
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

The assembled and annotated genome of the masked palm civet (Paguma larvata)

1
1. scibot 21 May 2022
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giac041
  
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ncbi.nlm.nih.gov/pmc/articles/PMC9116208/
Apr 2022
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

A high-quality assembly reveals genomic characteristics, phylogenetic status, and causal genes for leucism plumage of Indian peafowl

1
1. scibot 09 Apr 2022
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giac018
  
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  Curator: @evieth
  
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ncbi.nlm.nih.gov/pmc/articles/PMC8985102/
Dec 2021
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

A high-quality genome and comparison of short- versus long-read transcriptome of the palaearctic duck Aythya fuligula (tufted duck)

1
1. scibot 23 Dec 2021
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giab081
  
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ncbi.nlm.nih.gov/pmc/articles/PMC8685854/
www.mdpi.com www.mdpi.com

Chromosomal-Level Assembly of Antarctic Scaly Rockcod, Trematomus loennbergii Genome Using Long-Read Sequencing and Chromosome Conformation Capture (Hi-C) Technologies

1
1. scibot 21 Dec 2021
  
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  SCR_007891
  
  DOI: 10.3390/d13120668
  
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mdpi.com/1424-2818/13/12/668
Oct 2021
academic.oup.com academic.oup.com

Chromosome-level genome assemblies of Channa argus and Channa maculata and comparative analysis of their temperature adaptability

1
1. scibot 26 Oct 2021
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giab070
  
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academic.oup.com/gigascience/article/10/10/giab070/6407244
Sep 2021
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Elevated transcription of transposable elements is accompanied by het-siRNA-driven de novo DNA methylation in grapevine embryogenic callus

1
1. scibot 22 Sep 2021
  
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  RRID:SCR_007891
  
  DOI: 10.1186/s12864-021-07973-9
  
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link.springer.com/article/10.1186/s12864-021-07973-9
Aug 2021
onlinelibrary.wiley.com onlinelibrary.wiley.com

New high-quality peach (Prunus persica L. Batsch) genome assembly to analyze the molecular evolutionary mechanism of volatile compounds in peach fruits

1
1. scibot 19 Aug 2021
  
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  RRID:SCR_007891
  
  DOI: 10.1111/tpj.15439
  
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  Curator: @scibot
  
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onlinelibrary.wiley.com/doi/10.1111/tpj.15439
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  DOI: 10.1093/gigascience/giy031
  
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Chromosome‐level assembly of Southern catfish (Silurus meridionalis) provides insights into visual adaptation to the nocturnal and benthic lifestyles

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1. scibot 03 Aug 2021
  
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  RRID:SCR_007891
  
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onlinelibrary.wiley.com/doi/10.1111/1755-0998.13338
Jul 2021
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Re-assembly, quality evaluation, and annotation of 678 microbial eukaryotic reference transcriptomes

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academic.oup.com/gigascience/article/8/4/giy158/5241890
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The draft genome of blunt snout bream (Megalobrama amblycephala) reveals the development of intermuscular bone and adaptation to herbivorous diet

1
1. scibot 27 Jul 2021
  
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  RRID:SCR_0
  
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academic.oup.com/gigascience/article/6/7/1/3847731/The-draft-genome-of-blunt-snout-bream-Megalobrama
Apr 2021
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A chromosome-level reference genome of the hazelnut, Corylus heterophylla Fisch

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1. scibot 24 Apr 2021
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giab027
  
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academic.oup.com/gigascience/article/10/4/giab027/6237163
Feb 2021
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The Genome Assembly and Annotation of the Southern Elephant Seal Mirounga leonina

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mdpi.com/2073-4425/11/2/160
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Chromosomal assembly of the Antarctic toothfish (Dissostichus mawsoni) genome using third-generation DNA sequencing and Hi-C technology

2
1. scibot 02 Feb 2021
  
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  RRID:SCR_007891
  
  DOI: 10.24272/j.issn.2095-8137.2020.264
  
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  DOI: 10.24272/j.issn.2095-8137.2020.264
  
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ncbi.nlm.nih.gov/pmc/articles/PMC7840457/
Dec 2020
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Chromosome-level draft genome of a diploid plum (Prunus salicina)

1
1. scibot 16 Dec 2020
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giaa130
  
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academic.oup.com/gigascience/article/9/12/giaa130/6029397
Sep 2020
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Chromosome-level genome assembly of Aldrichina grahami , a forensically important blowfly

1
1. scibot 17 Sep 2020
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giaa020
  
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academic.oup.com/gigascience/article/9/3/giaa020/5810243
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Genome sequence of the agarwood tree Aquilaria sinensis (Lour.) Spreng: the first chromosome-level draft genome in the Thymelaeceae family

1
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  RRID:SCR_007891
  
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academic.oup.com/gigascience/article/9/3/giaa013/5771296
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The Alazami Syndrome-Associated Protein LARP7 Guides U6 Small Nuclear RNA Modification and Contributes to Splicing Robustness

1
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  DOI: 10.1016/j.molcel.2020.01.001
  
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sciencedirect.com/science/article/pii/S1097276520300010
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The chromosome-level draft genome of Dalbergia odorifera

1
1. scibot 09 Sep 2020
  
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  DOI: 10.1093/gigascience/giaa084
  
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academic.oup.com/gigascience/article/9/8/giaa084/5893771
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Chromosomal‐level assembly of Takifugu obscurus (Abe, 1949) genome using third‐generation DNA sequencing and Hi‐C analysis

1
1. scibot 08 Sep 2020
  
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  RRID:SCR_007891
  
  DOI: 10.1111/1755-0998.13132
  
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onlinelibrary.wiley.com/doi/10.1111/1755-0998.13132
Jan 2020
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De novo genome assembly of the endangered Acer yangbiense , a plant species with extremely small populations endemic to Yunnan Province, China

1
1. scibot 13 Jan 2020
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giz085
  
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academic.oup.com/gigascience/article/8/7/giz085/5532406
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Chromosomal-level assembly of the blood clam, Scapharca ( Anadara ) broughtonii , using long sequence reads and Hi-C

1
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giz067
  
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academic.oup.com/gigascience/article/8/7/giz067/5530322
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Draft genome sequence of Solanum aethiopicum provides insights into disease resistance, drought tolerance, and the evolution of the genome

1
1. scibot 13 Jan 2020
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giz115
  
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academic.oup.com/gigascience/article/8/10/giz115/5579996
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Untitled document

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  DOI: 10.1093/gigascience/giy119
  
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academic.oup.com/gigascience/article/7/11/giy119/5106932
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De novo genome assembly of the white-spotted flower chafer (Protaetia brevitarsis)

1
1. scibot 13 Jan 2020
  
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  RRID:SCR_007891
  
  DOI: 10.1093/gigascience/giz019
  
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academic.oup.com/gigascience/article/8/4/giz019/5428098
Apr 2019
onlinelibrary.wiley.com onlinelibrary.wiley.com

Chronic methamphetamine regulates the expression of MicroRNAs and putative target genes in the nucleus accumbens of mice

1
1. scibot 05 Apr 2019
  
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  nif-0000-03402
  
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onlinelibrary.wiley.com/doi/10.1002/jnr.23605/full
Nov 2018
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Innovative assembly strategy contributes to understanding the evolution and conservation genetics of the endangered Solenodon paradoxus from the island of Hispaniola

1
1. scibot 05 Nov 2018
  
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academic.oup.com/gigascience/article/7/6/giy025/4931057
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academic.oup.com/gigascience/article/7/4/giy031/4958978
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Draft genome of the gayal, Bos frontalis

1
1. scibot 05 Nov 2018
  
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academic.oup.com/gigascience/article/6/11/1/4345652
Nov 2017
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The draft genome of blunt snout bream (Megalobrama amblycephala) reveals the development of intermuscular bone and adaptation to herbivorous diet

1
1. scibot 09 Nov 2017
  
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  RRID:SCR_007891
  
  Curator: @chewbeccax
  
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academic.oup.com/gigascience/article/6/7/1/3847731/The-draft-genome-of-blunt-snout-bream-Megalobrama