259 Matching Annotations
  1. Last 7 days
  2. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    gNOMO2: a comprehensive and modular pipeline for integrated multi-omics analyses of microbiomes
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    1. scibot 17 Jul 2024
      RRID:SCR_008417

      DOI: 10.1093/gigascience/giae038

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    ncbi.nlm.nih.gov/pmc/articles/PMC11240238/
  3. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Exploring the cobia (Rachycentron canadum) genome: unveiling putative male heterogametic regions and identification of sex-specific markers
    1
    1. scibot 17 Jul 2024
      RRID:SCR_008417

      DOI: 10.1093/gigascience/giae034

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    ncbi.nlm.nih.gov/pmc/articles/PMC11240236/
  4. Jul 2024
  5. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Gapless genome assembly and epigenetic profiles reveal gene regulation of whole-genome triplication in lettuce
    1
    1. scibot 14 Jul 2024
      RRID:SCR_008417

      DOI: 10.1093/gigascience/giae043

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    ncbi.nlm.nih.gov/pmc/articles/PMC11238431/
  6. Jun 2024
  7. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genomes of Dahlia pinnata, Cosmos bipinnatus, and Bidens alba in tribe Coreopsideae provide insights into polyploid evolution and inulin biosynthesis
    1
    1. scibot 22 Jun 2024
      RRID:SCR_008417

      DOI: 10.1093/gigascience/giae032

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    ncbi.nlm.nih.gov/pmc/articles/PMC11170221/
  8. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The telomere-to-telomere (T2T) genome of Peucedanum praeruptorum Dunn provides insights into the genome evolution and coumarin biosynthesis
    1
    1. scibot 08 Jun 2024
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      DOI: 10.1093/gigascience/giae025

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    ncbi.nlm.nih.gov/pmc/articles/PMC11152176/
  9. May 2024
  10. www.sciencedirect.com www.sciencedirect.com
    Reciprocal conversion between annual and polycarpic perennial flowering behavior in the Brassicaceae
    3
    1. scibot 30 May 2024
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      DOI: 10.1016/j.cell.2024.04.047

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    2. scibot 30 May 2024
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      DOI: 10.1016/j.cell.2024.04.047

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    3. scibot 30 May 2024
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      DOI: 10.1016/j.cell.2024.04.047

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    sciencedirect.com/science/article/pii/S0092867424004732
  11. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    De novo transcriptome assembly and genome annotation of the fat-tailed dunnart (Sminthopsis crassicaudata)
    1
    1. scibot 17 May 2024
      RRID:SCR_008417

      DOI: 10.46471/gigabyte.118

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    ncbi.nlm.nih.gov/pmc/articles/PMC11091235/
  12. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the edible jelly fungus Dacryopinax spathularia (Dacrymycetaceae)
    1
    1. scibot 08 May 2024
      RRID:SCR_008417

      DOI: 10.46471/gigabyte.120

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    ncbi.nlm.nih.gov/pmc/articles/PMC11066560/
  13. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of the common chiton, Liolophura japonica (Lischke, 1873)
    1
    1. scibot 08 May 2024
      RRID:SCR_008417

      DOI: 10.46471/gigabyte.123

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    ncbi.nlm.nih.gov/pmc/articles/PMC11068029/
  14. Apr 2024
  15. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comprehensive genome assembly reveals genetic diversity and carcass consumption insights in critically endangered Asian king vultures
    1
    1. scibot 28 Apr 2024
      RRID:SCR_008417

      DOI: 10.1038/s41598-024-59990-9

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    ncbi.nlm.nih.gov/pmc/articles/PMC11043450/
  16. Mar 2024
  17. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome of the poultry shaft louse Menopon gallinae provides insight into the host-switching and adaptive evolution of parasitic lice
    1
    1. scibot 03 Mar 2024
      RRID:SCR_008417

      DOI: 10.1093/gigascience/giae004

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    ncbi.nlm.nih.gov/pmc/articles/PMC10904027/
  18. Feb 2024
  19. dx.doi.org dx.doi.org
    Long read genome assembly of Automeris io (Lepidoptera: Saturniidae) an emerging model for the evolution of deimatic displays
    1
    1. scibot 08 Feb 2024
      RRID:SCR_008417

      DOI: 10.1093/g3journal/jkad292

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    dx.doi.org/10.1093/g3journal/jkad292
  20. Jan 2024
  21. dx.doi.org dx.doi.org
    The chromosome-scale genome of Magnolia sinica (Magnoliaceae) provides insights into the conservation of plant species with extremely small populations (PSESP)
    1
    1. scibot 18 Jan 2024
      RRID:SCR_008417

      DOI: 10.1093/gigascience/giad110

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    dx.doi.org/10.1093/gigascience/giad110
  22. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptation
    1
    1. scibot 05 Jan 2024
      RRID:SCR_008417

      DOI: 10.1093/gigascience/giad107

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    ncbi.nlm.nih.gov/pmc/articles/PMC10764150/
  23. Dec 2023
  24. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of the Pacific geoduck Panopea generosa reveals major inter- and intrachromosomal rearrangements and substantial expansion of the copine gene family
    1
    1. scibot 21 Dec 2023
      RRID:SCR_008417

      DOI: 10.1093/gigascience/giad105

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    ncbi.nlm.nih.gov/pmc/articles/PMC10729735/
  25. gigabytejournal.com gigabytejournal.com
    Genome assembly and annotation of the king ratsnake, Elaphe carinata
    1
    1. scibot 14 Dec 2023
      RRID:SCR_008417

      DOI: 10.46471/gigabyte.101

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    gigabytejournal.com/articles/101
  26. Nov 2023
  27. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Truncated radial glia as a common precursor in the late corticogenesis of gyrencephalic mammals
    1
    1. scibot 26 Nov 2023
      RRID:SCR_008417

      DOI: 10.7554/eLife.91406

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    ncbi.nlm.nih.gov/pmc/articles/PMC10662950/
  28. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly and annotation of the Brown-Spotted Pit viper Protobothrops mucrosquamatus
    1
    1. scibot 16 Nov 2023
      RRID:SCR_008417

      DOI: 10.46471/gigabyte.97

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    ncbi.nlm.nih.gov/pmc/articles/PMC10644238/
  29. Oct 2023
  30. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The chromosome-level genome of Chinese praying mantis Tenodera sinensis (Mantodea: Mantidae) reveals its biology as a predator
    1
    1. scibot 28 Oct 2023
      RRID:SCR_008417

      DOI: 10.1093/gigascience/giad090

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    ncbi.nlm.nih.gov/pmc/articles/PMC10600911/
  31. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome of the venomous snail Kalloconus canariensis: a valuable model for venomics and comparative genomics
    1
    1. scibot 05 Oct 2023
      RRID:SCR_008417

      DOI: 10.1093/gigascience/giad075

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    ncbi.nlm.nih.gov/pmc/articles/PMC10541794/
  32. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level reference genome of tetraploid Isoetes sinensis provides insights into evolution and adaption of lycophytes
    1
    1. scibot 05 Oct 2023
      RRID:SCR_008417

      DOI: 10.1093/gigascience/giad079

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    ncbi.nlm.nih.gov/pmc/articles/PMC10541799/
  33. Sep 2023
  34. www.sciencedirect.com www.sciencedirect.com
    Characterization of the male-specific region containing the candidate sex-determining gene in Amur catfish (Silurus asotus) using third-generation- and pool-sequencing data
    1
    1. scibot 27 Sep 2023
      RRID:SCR_008417

      DOI: 10.1016/j.ijbiomac.2023.125908

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    sciencedirect.com/science/article/pii/S0141813023028039
  35. Aug 2023
  36. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Haplogenome assembly reveals structural variation in Eucalyptus interspecific hybrids
    1
    1. scibot 29 Aug 2023
      RRID:SCR_008417

      DOI: 10.1093/gigascience/giad064

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    ncbi.nlm.nih.gov/pmc/articles/PMC10460159/
  37. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome and recombination map of the male buffalo
    1
    1. scibot 26 Aug 2023
      RRID:SCR_008417

      DOI: 10.1093/gigascience/giad063

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    ncbi.nlm.nih.gov/pmc/articles/PMC10433102/
  38. Jul 2023
  39. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic analyses provide insights into the evolution and salinity adaptation of halophyte Tamarix chinensis
    1
    1. scibot 29 Jul 2023
      RRID:SCR_008417

      DOI: 10.1093/gigascience/giad053

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    ncbi.nlm.nih.gov/pmc/articles/PMC10370455/
  40. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genome assembly and annotation of the many-banded krait, Bungarus multicinctus
    1
    1. scibot 06 Jul 2023
      RRID:SCR_008417

      DOI: 10.46471/gigabyte.82

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    ncbi.nlm.nih.gov/pmc/articles/PMC10315667/
  41. Jun 2023
  42. www.sciencedirect.com www.sciencedirect.com
    Evolutionary analysis of cellular reduction and anaerobicity in the hyper-prevalent gut microbe Blastocystis
    1
    1. scibot 02 Jun 2023
      RRID:SCR_008417

      DOI: 10.1016/j.cub.2023.05.025

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    sciencedirect.com/science/article/pii/S0960982223006206
  43. May 2023
  44. academic.oup.com academic.oup.com
    Comparative genomics revealed drastic gene difference in two small Chinese perches, Siniperca undulata and S. obscura
    1
    1. scibot 18 May 2023
      RRID:SCR_008417

      DOI: 10.1093/g3journal/jkad101

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    academic.oup.com/g3journal/advance-article/doi/10.1093/g3journal/jkad101/7157186
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of an Australian native grass species reveals a recent whole-genome duplication and biased gene retention of genes involved in stress response
    1
    1. scibot 16 May 2023
      RRID:SCR_008417

      DOI: 10.1093/gigascience/giad034

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    ncbi.nlm.nih.gov/pmc/articles/PMC10176504/
  46. academic.oup.com academic.oup.com
    A high-quality, long-read genome assembly of the whitelined sphinx moth (Lepidoptera: Sphingidae: Hyles lineata) shows highly conserved melanin synthesis pathway genes
    1
    1. scibot 06 May 2023
      RRID:SCR_008417

      DOI: 10.1093/g3journal/jkad090

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    academic.oup.com/g3journal/advance-article/doi/10.1093/g3journal/jkad090/7147210
  47. Apr 2023
  48. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Molecular mechanisms underlying hematophagia revealed by comparative analyses of leech genomes
    1
    1. scibot 14 Apr 2023
      RRID:SCR_008417

      DOI: 10.1093/gigascience/giad023

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    ncbi.nlm.nih.gov/pmc/articles/PMC10087013/
  49. Mar 2023
  50. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the roundjaw bonefish (Albula glossodonta), a vulnerable circumtropical sportfish
    1
    1. scibot 29 Mar 2023
      RRID:SCR_008417

      DOI: 10.46471/gigabyte.44

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    ncbi.nlm.nih.gov/pmc/articles/PMC10038134/
  51. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the deep-sea coral Lophelia pertusa
    1
    1. scibot 22 Mar 2023
      SCR_008417

      DOI: 10.46471/gigabyte.78

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    ncbi.nlm.nih.gov/pmc/articles/PMC10022433/
  52. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A highly contiguous, scaffold-level nuclear genome assembly for the fever tree (Cinchona pubescens Vahl) as a novel resource for Rubiaceae research
    1
    1. scibot 22 Mar 2023
      RRID:SCR_008417

      DOI: 10.46471/gigabyte.71

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    ncbi.nlm.nih.gov/pmc/articles/PMC10027117/
  53. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genome of the mustard hill coral, Porites astreoides
    1
    1. scibot 02 Mar 2023
      RRID:SCR_008417

      DOI: 10.46471/gigabyte.65

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    ncbi.nlm.nih.gov/pmc/articles/PMC9693771/
  54. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of a benthic associated Syngnathiformes species: the common dragonet, Callionymus lyra
    1
    1. scibot 02 Mar 2023
      SCR_008417

      DOI: 10.46471/gigabyte.6

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    ncbi.nlm.nih.gov/pmc/articles/PMC9631949/
  55. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic Resources for the North American Water Vole (Microtus richardsoni) and the Montane Vole (Microtus montanus)
    1
    1. scibot 02 Mar 2023
      RRID:SCR_008417

      DOI: 10.46471/gigabyte.19

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    ncbi.nlm.nih.gov/pmc/articles/PMC9631978/
  56. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Draft genome of the aquatic moss Fontinalis antipyretica (Fontinalaceae, Bryophyta)
    1
    1. scibot 02 Mar 2023
      RRID:SCR_015981

      DOI: 10.46471/gigabyte.8

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    ncbi.nlm.nih.gov/pmc/articles/PMC9631980/
  57. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A new and improved genome sequence of Cannabis sativa
    1
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      DOI: 10.46471/gigabyte.10

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  58. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A draft genome assembly of the eastern banjo frog Limnodynastes dumerilii dumerilii (Anura: Limnodynastidae)
    1
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      DOI: 10.46471/gigabyte.2

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  59. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of the humpback puffer, Tetraodon palembangensis
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      DOI: 10.46471/gigabyte.17

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  60. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    First De novo whole genome sequencing and assembly of mutant Dendrobium hybrid cultivar ‘Emma White’
    1
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      DOI: 10.46471/gigabyte.66

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    ncbi.nlm.nih.gov/pmc/articles/PMC9694038/
  61. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level genome assembly and annotation of the maize elite breeding line Dan340
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      DOI: 10.46471/gigabyte.63

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    ncbi.nlm.nih.gov/pmc/articles/PMC9694154/
  62. Feb 2023
  63. www.sciencedirect.com www.sciencedirect.com
    A chromosome-level genome assembly of Ostrea denselamellosa provides initial insights into its evolution
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      DOI: 10.1016/j.ygeno.2023.110582

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    sciencedirect.com/science/article/pii/S0888754323000265
  64. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome and the identification of sex chromosomes in Uloborus diversus
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      DOI: 10.1093/gigascience/giad002

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  65. www.mdpi.com www.mdpi.com
    Genome Assembly and Comparative Analysis of the Egg Parasitoid Wasp Trichogramma dendrolimi Shed Light on the Composition and Evolution of Olfactory Receptors and Venoms
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      DOI: 10.3390/insects14020144

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  66. Jan 2023
  67. www.biorxiv.org www.biorxiv.org
    A chromosome-scale assembly for tetraploid sour cherry (Prunus cerasus L.) ‘Montmorency’ identifies three distinct ancestral Prunus genomes
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      DOI: 10.1101/2023.01.10.523438

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    biorxiv.org/content/10.1101/2023.01.10.523438v1
  68. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome-level genome assembly of Dastarcus helophoroides provides insights into CYP450 genes expression upon insecticide exposure
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      DOI: 10.1002/ps.7319

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    onlinelibrary.wiley.com/doi/10.1002/ps.7319
  69. Dec 2022
  70. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Near-chromosomal de novo assembly of Bengal tiger genome reveals genetic hallmarks of apex predation
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      DOI: 10.1093/gigascience/giac112

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  71. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A Chromosome-level assembly of the Japanese eel genome, insights into gene duplication and chromosomal reorganization
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      DOI: 10.1093/gigascience/giac120

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    ncbi.nlm.nih.gov/pmc/articles/PMC9730501/
  72. Nov 2022
  73. academic.oup.com academic.oup.com
    The whole-genome assembly of an endangered Salicaceae species: Chosenia arbutifolia (Pall.) A. Skv
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      DOI: 10.1093/gigascience/giac109

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac109/6827246
  74. academic.oup.com academic.oup.com
    High-quality genome assembles from key Hawaiian coral species
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      DOI: 10.1093/gigascience/giac098

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac098/6815755
  75. academic.oup.com academic.oup.com
    Capparis spinosa var. herbacea genome provides the first genomic instrument for a diversity and evolution study of the Capparaceae family
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      DOI: 10.1093/gigascience/giac106

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  76. Oct 2022
  77. 52.53.155.43 52.53.155.43
    1-s2.0-S2095311922001058-main-html.html
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      DOI: 10.1016/j.jia.2022.08.027

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  78. Sep 2022
  79. www.sciencedirect.com www.sciencedirect.com
    Genomic analysis reveals cryptic diversity in aphelids and sheds light on the emergence of Fungi
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      DOI: 10.1016/j.cub.2022.08.071

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    sciencedirect.com/science/article/pii/S0960982222013938
  80. academic.oup.com academic.oup.com
    Comparative genome and evolution analyses of an endangered stony coral species Dendrophyllia cribrosa near Dokdo Islands in the East Sea
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      DOI: 10.1093/gbe/evac132

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    academic.oup.com/gbe/article/14/9/evac132/6677079
  81. academic.oup.com academic.oup.com
    Identification of candidate sex‐specific genomic regions in male and female Asian arowana genomes
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      DOI: 10.1093/gigascience/giac085

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac085/6700067
  82. Aug 2022
  83. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Computational analysis on two putative mitochondrial protein-coding genes from the Emydura subglobosa genome: A functional annotation approach
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    1. scibot 26 Aug 2022
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      DOI: 10.1371/journal.pone.0268031

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    ncbi.nlm.nih.gov/pmc/articles/PMC9387794/
  84. Jul 2022
  85. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level genome of the booklouse, Liposcelis brunnea, provides insight into louse evolution and environmental stress adaptation
    1
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      DOI: 10.1093/gigascience/giac062

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    ncbi.nlm.nih.gov/pmc/articles/PMC9295366/
  86. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level assembly and annotation of the blue catfish Ictalurus furcatus, an aquaculture species for hybrid catfish reproduction, epigenetics, and heterosis studies
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      DOI: 10.1093/gigascience/giac070

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    ncbi.nlm.nih.gov/pmc/articles/PMC9270728/
  87. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of Plazaster borealis sheds light on the morphogenesis of multiarmed starfish and its regenerative capacity
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      DOI: 10.1093/gigascience/giac063

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    ncbi.nlm.nih.gov/pmc/articles/PMC9270726/
  88. academic.oup.com academic.oup.com
    A chromosome-level genome assembly and intestinal transcriptome of Trypoxylus dichotomus (Coleoptera: Scarabaeidae) to understand its lignocellulose digestion ability
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      DOI: 10.1093/gigascience/giac059

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac059/6619297
  89. Jun 2022
  90. academic.oup.com academic.oup.com
    A chromosome-level genome assembly of Artocarpus nanchuanensis (Moraceae), an extremely endangered fruit tree
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      DOI: 10.1093/gigascience/giac042

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac042/6608506
  91. academic.oup.com academic.oup.com
    Genomes and demographic histories of the endangered Bretschneidera sinensis (Akaniaceae)
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      DOI: 10.1093/gigascience/giac050

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac050/6608505
  92. May 2022
  93. academic.oup.com academic.oup.com
    Chromosome‐level genome assembly of the black widow spider Latrodectus elegans illuminates composition and evolution of venom and silk proteins
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    1. scibot 28 May 2022
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      DOI: 10.1093/gigascience/giac049

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac049/6593146
  94. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The assembled and annotated genome of the masked palm civet (Paguma larvata)
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    1. scibot 21 May 2022
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      DOI: 10.1093/gigascience/giac041

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    ncbi.nlm.nih.gov/pmc/articles/PMC9116208/
  95. gigabytejournal.com gigabytejournal.com
    LT1, an ONT long-read-based assembly scaffolded with Hi-C data and polished with short reads
    1
    1. scibot 10 May 2022
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      DOI: 10.46471/gigabyte.51

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    gigabytejournal.com/articles/51
  96. Apr 2022
  97. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality assembly reveals genomic characteristics, phylogenetic status, and causal genes for leucism plumage of Indian peafowl
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    1. scibot 09 Apr 2022
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      DOI: 10.1093/gigascience/giac018

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    ncbi.nlm.nih.gov/pmc/articles/PMC8985102/
  98. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome of the globe skimmer dragonfly (Pantala flavescens)
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    1. scibot 07 Apr 2022
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      DOI: 10.1093/gigascience/giac009

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    ncbi.nlm.nih.gov/pmc/articles/PMC8978299/
  99. academic.oup.com academic.oup.com
    A high-quality assembled genome and its comparative analysis decode the adaptive molecular mechanism of the number one Chinese cotton variety CRI-12
    1
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      DOI: 10.1093/gigascience/giac019

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac019/6562534
  100. Mar 2022
  101. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The haplotype-resolved chromosome pairs of a heterozygous diploid African cassava cultivar reveal novel pan-genome and allele-specific transcriptome features
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    1. scibot 31 Mar 2022
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      DOI: 10.1093/gigascience/giac028

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    ncbi.nlm.nih.gov/pmc/articles/PMC8952263/
  102. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-length genome assembly and linkage map of a critically endangered Australian bird: the helmeted honeyeater
    1
    1. scibot 31 Mar 2022
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      DOI: 10.1093/gigascience/giac025

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    ncbi.nlm.nih.gov/pmc/articles/PMC8963300/
  103. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly, annotation, and phylogenomics of the gooseneck barnacle Pollicipes pollicipes
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    1. scibot 18 Mar 2022
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      DOI: 10.1093/gigascience/giac021

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    ncbi.nlm.nih.gov/pmc/articles/PMC8917513/
  104. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    High-quality assembly of the reference genome for scarlet sage, Salvia splendens, an economically important ornamental plant
    1
    1. scibot 05 Mar 2022
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      DOI: 10.1093/gigascience/giy068

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    ncbi.nlm.nih.gov/labs/pmc/articles/PMC6030905/
  105. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome sequence of the Japanese oak silk moth, Antheraea yamamai: the first draft genome in the family Saturniidae
    1
    1. scibot 05 Mar 2022
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      DOI: 10.1093/gigascience/gix113

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    ncbi.nlm.nih.gov/labs/pmc/articles/PMC5774507/
  106. www.sciencedirect.com www.sciencedirect.com
    The new Haemaphysalis longicornis genome provides insights into its requisite biological traits
    1
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      DOI: 10.1016/j.ygeno.2022.110317

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    sciencedirect.com/science/article/pii/S0888754322000623
  107. Feb 2022
  108. www.sciencedirect.com www.sciencedirect.com
    Whole-genome sequence of the planarian Dugesia japonica combining Illumina and PacBio data
    1
    1. scibot 16 Feb 2022
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      DOI: 10.1016/j.ygeno.2022.110293

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    sciencedirect.com/science/article/pii/S0888754322000386
  109. academic.oup.com academic.oup.com
    A chromosome-level genome assembly and annotation of the desert horned lizard, Phrynosoma platyrhinos, provides insight into chromosomal rearrangements among reptiles
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  110. Jan 2022
  111. onlinelibrary.wiley.com onlinelibrary.wiley.com
    A high-quality chromosome-level genome of the endangered roughskin sculpin provides insights into its evolution and adaptation
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    Chromosome-level genome assembly of the shuttles hoppfish, Periophthalmus modestus
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  113. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Improved chromosome-level genome assembly of the Glanville fritillary butterfly (Melitaea cinxia) integrating Pacific Biosciences long reads and a high-density linkage map
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  114. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Highly diverged lineages of Saccharomyces paradoxus in temperate to subtropical climate zones in China
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      DOI: 10.1002/yea.3688

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  115. Dec 2021
  116. www.mdpi.com www.mdpi.com
    Chromosomal-Level Assembly of Antarctic Scaly Rockcod, Trematomus loennbergii Genome Using Long-Read Sequencing and Chromosome Conformation Capture (Hi-C) Technologies
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  117. academic.oup.com academic.oup.com
    A high-resolution genome of an euryhaline and eurythermal rhinogoby (Rhinogobius similis Gill 1895)
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    academic.oup.com/g3journal/advance-article/doi/10.1093/g3journal/jkab395/6430980
  118. Nov 2021
  119. academic.oup.com academic.oup.com
    De novo screening of disease-resistant genes from the chromosome-level genome of rare minnow using CRISPR-cas9 random mutation
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  120. gigabytejournal.com gigabytejournal.com
    Bicolor angelfish (Centropyge bicolor) provides the first chromosome-level genome of the Pomacanthidae family
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  121. Oct 2021
  122. academic.oup.com academic.oup.com
    Chromosome-level genome assemblies of Channa argus and Channa maculata and comparative analysis of their temperature adaptability
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  123. Sep 2021
  124. 52.53.155.43 52.53.155.43
    Zheng2019_Article_In-depthAnalysisOfTheGenomeOfT-html.html
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  125. Aug 2021
  126. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Pseudomolecule-level assembly of the Chinese oil tree yellowhorn (Xanthoceras sorbifolium) genome
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    ncbi.nlm.nih.gov/pmc/articles/PMC6593361/
  127. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genome assembly and annotation of yellowhorn (Xanthoceras sorbifolium Bunge)
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  128. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  129. academic.oup.com academic.oup.com
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  133. academic.oup.com academic.oup.com
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  135. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  137. europepmc.orghttp: europepmc.orghttp:
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  138. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  141. academic.oup.com academic.oup.com
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  142. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome‐level assembly of Southern catfish (Silurus meridionalis) provides insights into visual adaptation to the nocturnal and benthic lifestyles
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  143. academic.oup.com academic.oup.com
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    academic.oup.com/gigascience/article/8/5/giz036/5484800
  144. academic.oup.com academic.oup.com
    Chromosome-level genome assembly reveals the unique genome evolution of the swimming crab ( Portunus trituberculatus )
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  145. Jul 2021
  146. academic.oup.com academic.oup.com
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    academic.oup.com/gigascience/article/7/2/gix128/4750781
  148. academic.oup.com academic.oup.com
    Chromosomal-level assembly of yellow catfish genome using third-generation DNA sequencing and Hi-C analysis
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      DOI: 10.1093/gigascience/giy120

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  149. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  150. onlinelibrary.wiley.com onlinelibrary.wiley.com
    De Novo Assembly of a Chromosome‐Level Reference Genome of Red Spotted Grouper (Epinephelus akaara) Using Nanopore Sequencing and Hi‐C
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      DOI: 10.1111/1755-0998.13064

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  151. www.mdpi.com www.mdpi.com
    Genome of the Southern Giant Petrel Assembled Using Third-Generation DNA Sequencing and Linked Reads Reveals Evolutionary Traits of Southern Avian
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      DOI: 10.3390/ani11072046

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    mdpi.com/2076-2615/11/7/2046
  152. www.authorea.com www.authorea.com
    Chromosome-level genome assembly of the sweet potato weevil, Cylas formicarius (Fabricius) (Coleoptera: Brentidae) and functional characteristics of CforOBP4-6
    1
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      DOI: 10.22541/au.162460541.11570297/v1

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    authorea.com/users/421871/articles/527720-chromosome-level-genome-assembly-of-the-sweet-potato-weevil-cylas-formicarius-fabricius-coleoptera-brentidae-and-functional-characteristics-of-cforobp4-6
  153. Jun 2021
  154. academic.oup.com academic.oup.com
    A hybrid de novo assembly of the sea pansy (Renilla muelleri) genome
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      DOI: 10.1093/gigascience/giz026

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    academic.oup.com/gigascience/article/8/4/giz026/5426564
  155. academic.oup.com academic.oup.com
    The genome of the venomous snail Lautoconus ventricosus sheds light on the origin of conotoxin diversity
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    academic.oup.com/gigascience/article/10/5/giab037/6284011
  156. May 2021
  157. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Two high-quality de novo genomes from single ethanol-preserved specimens of tiny metazoans (Collembola)
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  158. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome‐level genome assembly of the Arctic fox (Vulpes lagopus) using PacBio sequencing and Hi‐C technology
    1
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    onlinelibrary.wiley.com/doi/10.1111/1755-0998.13397
  159. onlinelibrary.wiley.com onlinelibrary.wiley.com
    The Meishan pig genome reveals structural variation mediated gene expression and phenotypic divergence underlying Asian pig domestication
    1
    1. scibot 11 May 2021
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      DOI: 10.1111/1755-0998.13396

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  160. www.sciencedirect.com www.sciencedirect.com
    Whole-genome analysis of giraffe supports four distinct species
    1
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      DOI: 10.1016/j.cub.2021.04.033

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    sciencedirect.com/science/article/pii/S0960982221005467
  161. Apr 2021
  162. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of the hard-shelled mussel Mytilus coruscus, a widely distributed species from the temperate areas of East Asia
    1
    1. scibot 27 Apr 2021
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      DOI: 10.1093/gigascience/giab024

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    academic.oup.com/gigascience/article/10/4/giab024/6247647
  163. academic.oup.com academic.oup.com
    A chromosome-level reference genome of the hazelnut, Corylus heterophylla Fisch
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    1. scibot 24 Apr 2021
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      DOI: 10.1093/gigascience/giab027

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  164. gigabytejournal.com gigabytejournal.com
    The genome of Tripterygium wilfordii and characterization of the celastrol biosynthesis pathway
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    1. scibot 19 Apr 2021
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      DOI: 10.46471/gigabyte.14

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  165. www.sciencedirect.com www.sciencedirect.com
    Melatonin enhances nitrogen metabolism and haustorium development in hemiparasite Santalum album Linn
    1
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      DOI: 10.1016/j.envexpbot.2021.104460

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    sciencedirect.com/science/article/pii/S0098847221000903
  166. Mar 2021
  167. academic.oup.com academic.oup.com
    A chromosome‐level genome of the spider Trichonephila antipodiana reveals the genetic basis of its polyphagy and evidence of an ancient whole-genome duplication event
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  168. academic.oup.com academic.oup.com
    Genome sequence and genetic diversity analysis of an under-domesticated orphan crop, white fonio (Digitaria exilis)
    1
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  169. Feb 2021
  170. academic.oup.com academic.oup.com
    The draft genome sequence of the grove snail Cepaea nemoralis
    1
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      DOI: 10.1093/g3journal/jkaa071

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    academic.oup.com/g3journal/advance-article-abstract/doi/10.1093/g3journal/jkaa071/6080775
  171. www.g3journal.org www.g3journal.org
    Construction of Pseudomolecules for the Chinese Chestnut (Castanea mollissima) Genome
    1
    1. scibot 26 Feb 2021
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      DOI: 10.1534/g3.120.401532

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    g3journal.org/content/10/10/3565
  172. www.mdpi.com www.mdpi.com
    The Genome Assembly and Annotation of the Southern Elephant Seal Mirounga leonina
    1
    1. scibot 24 Feb 2021
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      DOI: 10.3390/genes11020160

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    mdpi.com/2073-4425/11/2/160
  173. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosomal assembly of the Antarctic toothfish (Dissostichus mawsoni) genome using third-generation DNA sequencing and Hi-C technology
    2
    1. scibot 02 Feb 2021
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      DOI: 10.24272/j.issn.2095-8137.2020.264

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    ncbi.nlm.nih.gov/pmc/articles/PMC7840457/
  174. Jan 2021
  175. link.springer.com link.springer.com
    The hard clam genome reveals massive expansion and diversification of inhibitors of apoptosis in Bivalvia
    1
    1. scibot 28 Jan 2021
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      DOI: 10.1186/s12915-020-00943-9

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    link.springer.com/article/10.1186/s12915-020-00943-9
  176. academic.oup.com academic.oup.com
    A chromosome-level genome assembly of the oriental river prawn, Macrobrachium nipponense
    1
    1. scibot 26 Jan 2021
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      DOI: 10.1093/gigascience/giaa160

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  177. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A new duck genome reveals conserved and convergently evolved chromosome architectures of birds and mammals
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    1. scibot 14 Jan 2021
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      DOI: 10.1093/gigascience/giaa142

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    ncbi.nlm.nih.gov/pmc/articles/PMC7787181/
  178. academic.oup.com academic.oup.com
    Chromosome-level reference genome of the European wasp spider Argiope bruennichi: a resource for studies on range expansion and evolutionary adaptation
    1
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      DOI: 10.1093/gigascience/giaa148

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    academic.oup.com/gigascience/article/10/1/giaa148/6067174
  179. Dec 2020
  180. academic.oup.com academic.oup.com
    Genome sequencing of deep-sea hydrothermal vent snails reveals adaptions to extreme environments
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      DOI: 10.1093/gigascience/giaa139

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  181. academic.oup.com academic.oup.com
    Chromosome-level draft genome of a diploid plum (Prunus salicina)
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    1. scibot 16 Dec 2020
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      DOI: 10.1093/gigascience/giaa130

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  182. academic.oup.com academic.oup.com
    Chromosomal genome of Triplophysa bleekeri provides insights into its evolution and environmental adaptation
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    1. scibot 07 Dec 2020
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      DOI: 10.1093/gigascience/giaa132

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  183. Nov 2020
  184. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Adaptive venom evolution and toxicity in octopods is driven by extensive novel gene formation, expansion, and loss
    1
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      DOI: 10.1093/gigascience/giaa120

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  185. Oct 2020
  186. academic.oup.com academic.oup.com
    Pacific Biosciences assembly with Hi-C mapping generates an improved, chromosome-level goose genome
    1
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      DOI: 10.1093/gigascience/giaa114

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  187. Sep 2020
  188. www.g3journal.org www.g3journal.org
    High-Quality Genome Assembly and Annotation of the Big-Eye Mandarin Fish (Siniperca knerii)
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      DOI: 10.1534/g3.119.400930

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    g3journal.org/content/10/3/877
  189. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosomal‐level assembly of Takifugu obscurus (Abe, 1949) genome using third‐generation DNA sequencing and Hi‐C analysis
    1
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      DOI: 10.1111/1755-0998.13132

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    onlinelibrary.wiley.com/doi/10.1111/1755-0998.13132
  190. academic.oup.com academic.oup.com
    De novo PacBio long-read and phased avian genome assemblies correct and add to reference genes generated with intermediate and short reads
    1
    1. scibot 26 Sep 2020
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      DOI: 10.1093/gigascience/gix085

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  191. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Construction of a chromosome-scale long-read reference genome assembly for potato
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    1. scibot 26 Sep 2020
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      DOI: 10.1093/gigascience/giaa100

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  192. academic.oup.com academic.oup.com
    Full genome survey and dynamics of gene expression in the greater amberjack Seriola dumerili
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    1. scibot 23 Sep 2020
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      DOI: 10.1093/gigascience/gix108

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    academic.oup.com/gigascience/article/6/12/gix108/4600083
  193. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A High-Quality Chromosomal Genome Assembly of Diospyros oleiferaCheng
    1
    1. scibot 23 Sep 2020
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      DOI: 10.1093/gigascience/giz164

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  194. academic.oup.com academic.oup.com
    Chromosome-level reference genome of the jellyfish Rhopilema esculentum
    1
    1. scibot 17 Sep 2020
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      DOI: 10.1093/gigascience/giaa036

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  195. www.microbiologyresearch.org www.microbiologyresearch.org
    Mycoparasitism illuminated by genome and transcriptome sequencing of Coniothyrium minitans, an important biocontrol fungus of the plant pathogen Sclerotinia sclerotiorum
    1
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      DOI: 10.1099/mgen.0.000345

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    microbiologyresearch.org/content/journal/mgen/10.1099/mgen.0.000345
  196. academic.oup.com academic.oup.com
    Genomic consequences of dietary diversification and parallel evolution due to nectarivory in leaf-nosed bats
    1
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      DOI: 10.1093/gigascience/giaa059

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  197. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of Aldrichina grahami , a forensically important blowfly
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    1. scibot 16 Sep 2020
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      DOI: 10.1093/gigascience/giaa020

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  198. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome‐level genome assembly of a cyprinid fish Onychostoma macrolepis by integration of Nanopore Sequencing, Bionano and Hi‐C technology
    1
    1. scibot 16 Sep 2020
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      DOI: 10.1111/1755-0998.13190

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  199. academic.oup.com academic.oup.com
    Genome sequence of the agarwood tree Aquilaria sinensis (Lour.) Spreng: the first chromosome-level draft genome in the Thymelaeceae family
    1
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      DOI: 10.1093/gigascience/giaa013

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  200. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome‐level genome assembly of an important pine defoliator, Dendrolimus punctatus (Lepidoptera; Lasiocampidae)
    1
    1. scibot 15 Sep 2020
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      DOI: 10.1111/1755-0998.13169

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  201. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of the female western mosquitofish ( Gambusia affinis )
    1
    1. scibot 12 Sep 2020
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      DOI: 10.1093/gigascience/giaa092

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  202. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A haplotype-resolved, de novo genome assembly for the wood tiger moth (Arctia plantaginis) through trio binning
    1
    1. scibot 10 Sep 2020
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      DOI: 10.1093/gigascience/giaa088

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    ncbi.nlm.nih.gov/pmc/articles/PMC7433188/
  203. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Draft Genome of the Asian Buffalo Leech Hirudinaria manillensis
    1
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      DOI: 10.3389/fgene.2019.01321

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    ncbi.nlm.nih.gov/pmc/articles/PMC6977106/
  204. academic.oup.com academic.oup.com
    The chromosome-level draft genome of Dalbergia odorifera
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      DOI: 10.1093/gigascience/giaa084

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  205. academic.oup.com academic.oup.com
    Chromosome-level genome assembly and annotation of the loquat ( Eriobotrya japonica ) genome
    1
    1. scibot 07 Sep 2020
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      DOI: 10.1093/gigascience/giaa015

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    The gene-rich genome of the scallop Pecten maximus
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    Chromosomal-level assembly of Juglans sigillata genome using Nanopore, BioNano, and Hi-C analysis
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  208. Jan 2020
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    A Species-Wide Inventory of NLR Genes and Alleles in Arabidopsis thaliana
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    Hybrid de novo genome assembly of Chinese chestnut ( Castanea mollissima )
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    Chromosome-level assembly of the mustache toad genome using third-generation DNA sequencing and Hi-C analysis
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    Genome-wide analysis of the H3K27me3 epigenome and transcriptome in Brassica rapa
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    Trochodendron aralioides, the first chromosome-level draft genome in Trochodendrales and a valuable resource for basal eudicot research
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  214. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  215. academic.oup.com academic.oup.com
    Genome and population sequencing of a chromosome-level genome assembly of the Chinese tapertail anchovy ( Coilia nasus ) provides novel insights into migratory adaptation
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      DOI: 10.1093/gigascience/giz157

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  216. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Whole-genome sequencing and analysis of the Chinese herbal plant Gelsemium elegans
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  217. academic.oup.com academic.oup.com
    A chromosome-level draft genome of the grain aphid Sitobion miscanthi
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      DOI: 10.1093/gigascience/giz101

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  218. academic.oup.com academic.oup.com
    A high-quality genome assembly for the endangered golden snub-nosed monkey (Rhinopithecus roxellana)
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  219. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A haplotype-resolved draft genome of the European sardine (Sardina pilchardus)
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  220. academic.oup.com academic.oup.com
    High-quality Schistosoma haematobium genome achieved by single-molecule and long-range sequencing
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      DOI: 10.1093/gigascience/giz108

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    De novo genome assembly of the endangered Acer yangbiense , a plant species with extremely small populations endemic to Yunnan Province, China
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    Chromosomal-level reference genome of Chinese peacock butterfly ( Papilio bianor ) based on third-generation DNA sequencing and Hi-C analysis
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      DOI: 10.1093/gigascience/giz128

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  223. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome‐level genome assembly of the razor clam Sinonovacula constricta (Lamarck, 1818)
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      DOI: 10.1111/1755-0998.13086

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  224. academic.oup.com academic.oup.com
    Chromosomal-level assembly of the blood clam, Scapharca ( Anadara ) broughtonii , using long sequence reads and Hi-C
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      DOI: 10.1093/gigascience/giz067

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  225. academic.oup.com academic.oup.com
    Assembly of the 373k gene space of the polyploid sugarcane genome reveals reservoirs of functional diversity in the world's leading biomass crop
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  226. academic.oup.com academic.oup.com
    A chromosomal-level genome assembly for the insect vector for Chagas disease, Triatoma rubrofasciata
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      DOI: 10.1093/gigascience/giz089

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  227. academic.oup.com academic.oup.com
    Genome sequence of the Chinese white wax scale insect Ericerus pela : the first draft genome for the Coccidae family of scale insects
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      DOI: 10.1093/gigascience/giz113

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    A chromosomal-level genome assembly for the giant African snail Achatina fulica
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      DOI: 10.1093/gigascience/giz124

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    Draft genome sequence of Solanum aethiopicum provides insights into disease resistance, drought tolerance, and the evolution of the genome
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  230. academic.oup.com academic.oup.com
    An integrated chromosome-scale genome assembly of the Masai giraffe (Giraffa camelopardalis tippelskirchi)
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      DOI: 10.1093/gigascience/giz090

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    The draft genome sequence of the spider Dysdera silvatica (Araneae, Dysderidae): A valuable resource for functional and evolutionary genomic studies in chelicerates
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    A draft genome assembly of halophyte Suaeda aralocaspica, a plant that performs C4 photosynthesis within individual cells
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  235. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  237. europepmc.org europepmc.org
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  238. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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      DOI: 10.1093/gigascience/giz023

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  239. academic.oup.com academic.oup.com
    De novo genome assembly of the white-spotted flower chafer (Protaetia brevitarsis)
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      DOI: 10.1093/gigascience/giz019

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  240. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  241. academic.oup.com academic.oup.com
    Haplotype-phased genome and evolution of phytonutrient pathways of tetraploid blueberry
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      DOI: 10.1093/gigascience/giz012

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  242. academic.oup.com academic.oup.com
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  243. academic.oup.com academic.oup.com
    A chromosomal-scale genome assembly of Tectona grandis reveals the importance of tandem gene duplication and enables discovery of genes in natural product biosynthetic pathways
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      DOI: 10.1093/gigascience/giz005

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  244. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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      DOI: 10.1093/gigascience/giz013

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  246. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-scale genome assembly of kiwifruit Actinidia eriantha with single-molecule sequencing and chromatin interaction mapping
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      DOI: 10.1093/gigascience/giz027

      Resource: Augustus (RRID:SCR_008417)

      Curator: @evieth

      SciCrunch record: RRID:SCR_008417

      What is this?

      RRID:SCR_008417 RRIDCUR:Validated
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    ncbi.nlm.nih.gov/pmc/articles/PMC6446220/