78 Matching Annotations
  1. May 2024
  2. www.medrxiv.org www.medrxiv.org
    Proliferative History Is a Novel Driver of Clinical Outcome in Splenic Marginal Zone Lymphoma
    1
    1. scibot 03 May 2024
      RRID:SCR_011867

      DOI: 10.1101/2024.01.16.24301320

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    medrxiv.org/content/10.1101/2024.01.16.24301320v1
  3. www.sciencedirect.com www.sciencedirect.com
    Molecular targets of glucocorticoids that elucidate their therapeutic efficacy in aggressive lymphomas
    1
    1. scibot 03 May 2024
      RRID:SCR_011867

      DOI: 10.1016/j.ccell.2024.04.007

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    sciencedirect.com/science/article/pii/S1535610824001314
  4. www.cell.com www.cell.com
    Variant-to-function analysis of the childhood obesity chr12q13 locus implicates rs7132908 as a causal variant within the 3′ UTR of FAIM2
    1
    1. scibot 02 May 2024
      RRID:SCR_011867

      DOI: 10.1016/j.xgen.2024.100556

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    cell.com/cell-genomics/fulltext/S2666-979X(24)00122-8
  5. Feb 2024
  6. www.nature.com www.nature.com
    A clinically applicable connectivity signature for glioblastoma includes the tumor network driver CHI3L1
    1
    1. scibot 08 Feb 2024
      RRID:SCR_011867

      DOI: 10.1038/s41467-024-45067-8

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    nature.com/articles/s41467-024-45067-8
  7. Jan 2024
  8. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PRDM3/16 Regulate Chromatin Accessibility Required for NKX2-1 Mediated Alveolar Epithelial Differentiation and Function
    1
    1. scibot 20 Jan 2024
      RRID:SCR_011867

      DOI: 10.1101/2023.12.20.570481

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    ncbi.nlm.nih.gov/pmc/articles/PMC10769259/
  9. Dec 2023
  10. www.sciencedirect.com www.sciencedirect.com
    Canonical IRE1 function needed to sustain vigorous natural killer cell proliferation during viral infection.
    2
    1. scibot 21 Dec 2023
      RRID:SCR_011867

      DOI: 10.1016/j.isci.2023.108570

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    2. scibot 21 Dec 2023
      RRID:SCR_011867

      DOI: 10.1016/j.isci.2023.108570

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    sciencedirect.com/science/article/pii/S2589004223026470
  11. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Characterization of nucleolar SUMO isopeptidases unveils a general p53-independent checkpoint of impaired ribosome biogenesis
    1
    1. scibot 13 Dec 2023
      RRID:SCR_011867

      DOI: 10.1038/s41467-023-43751-9

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    ncbi.nlm.nih.gov/pmc/articles/PMC10709353/
  12. Sep 2023
  13. www.sciencedirect.com www.sciencedirect.com
    Molecularly targetable cell types in mouse visual cortex have distinguishable prediction error responses
    1
    1. scibot 16 Sep 2023
      RRID:SCR_011867

      DOI: 10.1016/j.neuron.2023.08.015

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    sciencedirect.com/science/article/pii/S0896627323006268
  14. Aug 2023
  15. www.biorxiv.org www.biorxiv.org
    Variant-to-function analysis of the childhood obesity chr12q13 locus implicates rs7132908 as a causal variant within the 3’ UTR of FAIM2
    1
    1. scibot 27 Aug 2023
      RRID:SCR_011867

      DOI: 10.1101/2023.08.21.553157

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    biorxiv.org/content/10.1101/2023.08.21.553157v1
  16. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Proteasome Inhibition Sensitizes Liposarcoma to MDM2 Inhibition with Nutlin-3 by Activating the ATF4/CHOP Stress Response Pathway
    1
    1. scibot 03 Aug 2023
      RRID:SCR_011867

      DOI: 10.1158/0008-5472.CAN-22-3173

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    ncbi.nlm.nih.gov/pmc/articles/PMC10391328/
  17. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Cooperative and competitive regulation of the astrocytic transcriptome by neurons and endothelial cells: Impact on astrocyte maturation
    1
    1. scibot 03 Aug 2023
      RRID:SRC_011867

      DOI: 10.1111/jnc.15908

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    onlinelibrary.wiley.com/doi/10.1111/jnc.15908
  18. Jul 2023
  19. 52.53.155.43 52.53.155.43
    can-22-3173-html.html
    1
    1. scibot 08 Jul 2023
      RRID:SCR_011867

      DOI: 10.1158/0008-5472.can-22-3173

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    52.53.155.43/7a07162d3285902b20a1a359628fdd8826284ee8/can-22-3173-html.html
  20. Jun 2023
  21. 52.53.155.43 52.53.155.43
    can-22-3173-html.html
    1
    1. scibot 30 Jun 2023
      RRID:SCR_011867

      DOI: 10.1158/0008-5472.can-22-3173

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    52.53.155.43/7a07162d3285902b20a1a359628fdd8826284ee8/can-22-3173-html.html
  22. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Multi-omic longitudinal study reveals immune correlates of clinical course among hospitalized COVID-19 patients
    1
    1. scibot 21 Jun 2023
      RRID:SCR_011867

      DOI: 10.1016/j.xcrm.2023.101079

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    ncbi.nlm.nih.gov/pmc/articles/PMC10203880/
  23. 52.53.155.43 52.53.155.43
    1-s2.0-S2666379123001982-main-html.html
    1
    1. scibot 16 Jun 2023
      RRID:SCR_011867

      DOI: 10.1016/j.xcrm.2023.101079

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    52.53.155.43/5962ea7ac5a892fc17bc1e88a593a1be00907b4e/1-s2.0-S2666379123001982-main-html.html
  24. May 2023
  25. www-sciencedirect-com.ezproxy.auckland.ac.nz www-sciencedirect-com.ezproxy.auckland.ac.nz
    Bovine blastocyst-like structures derived from stem cell cultures
    1
    1. scibot 05 May 2023
      RRID:SCR_011867

      DOI: 10.1016/j.stem.2023.04.003

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    www-sciencedirect-com.ezproxy.auckland.ac.nz/science/article/pii/S1934590923001212
  26. Apr 2023
  27. www.sciencedirect.com www.sciencedirect.com
    Comprehensive epigenomic profiling reveals the extent of disease-specific chromatin states and informs target discovery in ankylosing spondylitis
    1
    1. scibot 26 Apr 2023
      RRID:SCR_011867

      DOI: 10.1016/j.xgen.2023.100306

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    sciencedirect.com/science/article/pii/S2666979X23000721
  28. Mar 2023
  29. link.springer.com link.springer.com
    Expression of down-regulated ERV LTR elements associates with immune activation in human small-cell lung cancers
    1
    1. scibot 15 Mar 2023
      RRID:SCR_011867

      DOI: 10.1186/s13100-023-00290-w

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    link.springer.com/article/10.1186/s13100-023-00290-w
  30. Jan 2023
  31. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Transcriptional profiling of Hutchinson-Gilford Progeria syndrome fibroblasts reveals deficits in mesenchymal stem cell commitment to differentiation related to early events in endochondral ossification
    1
    1. scibot 15 Jan 2023
      RRID:SCR_011867

      DOI: 10.7554/eLife.81290

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    ncbi.nlm.nih.gov/pmc/articles/PMC9833827/
  32. Dec 2022
  33. www.sciencedirect.com www.sciencedirect.com
    p53/p21 pathway activation contributes to the ependymal fate decision downstream of GemC1
    1
    1. scibot 18 Dec 2022
      RRID:SCR_011867

      DOI: 10.1016/j.celrep.2022.111810

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    sciencedirect.com/science/article/pii/S2211124722016989
  34. Oct 2022
  35. www.sciencedirect.com www.sciencedirect.com
    An anti-inflammatory transcriptional cascade conserved from flies to humans
    1
    1. scibot 20 Oct 2022
      RRID:SCR_011867

      DOI: 10.1016/j.celrep.2022.111506

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    sciencedirect.com/science/article/pii/S2211124722013560
  36. www.sciencedirect.com www.sciencedirect.com
    Human-specific regulation of neural maturation identified by cross-primate transcriptomics
    1
    1. scibot 13 Oct 2022
      RRID:SCR_011867

      DOI: 10.1016/j.cub.2022.09.028

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    sciencedirect.com/science/article/pii/S0960982222014725
  37. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    RNA-binding protein Elavl1/HuR is required for maintenance of cranial neural crest specification
    1
    1. scibot 07 Oct 2022
      RRID:SCR_011867

      DOI: 10.7554/eLife.63600

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    ncbi.nlm.nih.gov/pmc/articles/PMC9529247/
  38. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    NOTCH induced MDSC recruitment after oHSV virotherapy in CNS cancer models modulates anti-tumor immunotherapy
    1
    1. scibot 04 Oct 2022
      RRID:SCR_011867

      DOI: 10.1158/1078-0432.CCR-21-2347

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    ncbi.nlm.nih.gov/pmc/articles/PMC8976724/
  39. Aug 2022
  40. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Losartan blocks osteosarcoma-elicited monocyte recruitment, and combined with the kinase inhibitor toceranib, exerts significant clinical benefit in canine metastatic osteosarcoma
    1
    1. scibot 22 Aug 2022
      RRID:SCR_011867

      DOI: 10.1158/1078-0432.CCR-21-2105

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    ncbi.nlm.nih.gov/pmc/articles/PMC8866227/
  41. Jun 2022
  42. www.sciencedirect.com www.sciencedirect.com
    Inflammaging is driven by upregulation of innate immune receptors and systemic interferon signaling and is ameliorated by dietary restriction
    1
    1. scibot 29 Jun 2022
      RRID:SCR_011867

      DOI: 10.1016/j.celrep.2022.111017

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    sciencedirect.com/science/article/pii/S2211124722008063
  43. May 2022
  44. aacrjournals.org aacrjournals.org
    Melanoma-secreted Amyloid Beta Suppresses Neuroinflammation and Promotes Brain Metastasis
    1
    1. scibot 13 May 2022
      RRID:SCR_011867

      DOI: 10.1158/2159-8290.CD-21-1006

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    aacrjournals.org/cancerdiscovery/article/12/5/1314/694563/Melanoma-Secreted-Amyloid-Beta-Suppresses
  45. Apr 2022
  46. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Cancer cells retrace a stepwise differentiation program during malignant progression
    1
    1. scibot 02 Apr 2022
      RRID:SCR_011867

      DOI: 10.1158/2159-8290.CD-20-1637

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    ncbi.nlm.nih.gov/pmc/articles/PMC7611766/
  47. Nov 2021
  48. www.sciencedirect.com www.sciencedirect.com
    Homer1a regulates Shank3 expression and underlies behavioral vulnerability to stress in a model of Phelan-McDermid syndrome
    1
    1. scibot 17 Nov 2021
      RRID:SCR_011867

      DOI: 10.1016/j.celrep.2021.110014

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    sciencedirect.com/science/article/pii/S2211124721014960
  49. www.sciencedirect.com www.sciencedirect.com
    3D biomimetic platform reveals the first interactions of the embryo and the maternal blood vessels
    1
    1. scibot 06 Nov 2021
      RRID:SCR_011867

      DOI: 10.1016/j.devcel.2021.10.014

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    sciencedirect.com/science/article/pii/S1534580721008455
  50. Aug 2021
  51. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Cis-regulatory variants affect gene expression dynamics in yeast
    1
    1. scibot 21 Aug 2021
      RRID:SCR_011867

      DOI: 10.7554/eLife.68469

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    ncbi.nlm.nih.gov/pmc/articles/PMC8367379/
  52. www.sciencedirect.com www.sciencedirect.com
    Auxin requirements for a meristematic state in roots depend on a dual brassinosteroid function
    1
    1. scibot 21 Aug 2021
      RRID:SCR_011867

      DOI: 10.1016/j.cub.2021.07.075

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    sciencedirect.com/science/article/pii/S0960982221010654
  53. www.sciencedirect.com www.sciencedirect.com
    Erythroid mitochondrial retention triggers myeloid-dependent type I interferon in human SLE
    1
    1. scibot 16 Aug 2021
      RRID:SCR_011867

      DOI: 10.1016/j.cell.2021.07.021

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    sciencedirect.com/science/article/pii/S0092867421008801
  54. www.sciencedirect.com www.sciencedirect.com
    Affinity maturation of SARS-CoV-2 neutralizing antibodies confers potency, breadth, and resilience to viral escape mutations
    1
    1. scibot 15 Aug 2021
      RRID:SCR_011867

      DOI: 10.1016/j.immuni.2021.07.008

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    sciencedirect.com/science/article/pii/S1074761321002946
  55. Jul 2021
  56. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Modulation of hippocampal neuronal resilience during aging by the Hsp70/Hsp90 co‐chaperone STI1
    1
    1. scibot 31 Jul 2021
      HTseq‐count

      DOI: 10.1111/jnc.14882

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      Curator: @Naa003

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    onlinelibrary.wiley.com/doi/10.1111/jnc.14882
  57. bmcgenomics.biomedcentral.com bmcgenomics.biomedcentral.com
    The role of nitric oxide during embryonic wound healing
    1
    1. scibot 31 Jul 2021
      htseq-count

      DOI: 10.1186/s12864-019-6147-6

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    bmcgenomics.biomedcentral.com/articles/10.1186/s12864-019-6147-6
  58. academic.oup.com academic.oup.com
    Gtf2i and Gtf2ird1 mutation do not account for the full phenotypic effect of the Williams syndrome critical region in mouse models
    1
    1. scibot 31 Jul 2021
      Htseq-count

      DOI: 10.1093/hmg/ddz176

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    academic.oup.com/hmg/advance-article/doi/10.1093/hmg/ddz176/5550314
  59. elifesciences.org elifesciences.org
    NEIL1 and NEIL2 DNA glycosylases protect neural crest development against mitochondrial oxidative stress
    1
    1. scibot 30 Jul 2021
      HTSeq-count

      DOI: 10.7554/eLife.49044

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    elifesciences.org/articles/49044
  60. academic.oup.com academic.oup.com
    Genome-wide analysis of the H3K27me3 epigenome and transcriptome in Brassica rapa
    1
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      DOI: 10.1093/gigascience/giz147

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  61. May 2021
  62. cancerdiscovery.aacrjournals.org cancerdiscovery.aacrjournals.org
    Cell of Origin Influences Pancreatic Cancer Subtype
    1
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      DOI: 10.1158/2159-8290.CD-20-0633

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  63. clincancerres.aacrjournals.org clincancerres.aacrjournals.org
    YAP1 Mediates Trametinib Resistance in Head and Neck Squamous Cell Carcinomas
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      DOI: 10.1158/1078-0432.CCR-19-4179

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  64. Mar 2021
  65. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Human ORC/MCM density is low in active genes and correlates with replication time but does not delimit initiation zones
    1
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      DOI: 10.7554/eLife.62161

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  66. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Global analysis of shared T cell specificities in human non-small cell lung cancer enables HLA inference and antigen discovery
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      DOI: 10.1016/j.immuni.2021.02.014

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  67. Feb 2021
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    Direct reprogramming of oligodendrocyte precursor cells into GABAergic inhibitory neurons by a single homeodomain transcription factor Dlx2
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      DOI: 10.1038/s41598-021-82931-9

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  69. Oct 2020
  70. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Coding transcriptome analyses reveal altered functions underlying immunotolerance of PEG-fused rat sciatic nerve allografts
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      DOI: 10.1186/s12974-020-01953-8

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  71. Sep 2020
  72. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Rrp6 Moonlights in an RNA Exosome-Independent Manner to Promote Cell Survival and Gene Expression during Stress
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      DOI: 10.1016/j.celrep.2020.107754

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  73. elifesciences.org elifesciences.org
    Hair follicle dermal condensation forms via Fgf20 primed cell cycle exit, cell motility, and aggregation
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      DOI: 10.7554/eLife.36468

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  74. elifesciences.org elifesciences.org
    The ESRP1-GPR137 axis contributes to intestinal pathogenesis
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  75. www.embopress.org www.embopress.org
    Temporal specificity and heterogeneity of Drosophila immune cells
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      DOI: 10.15252/embj.2020104486

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  76. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Phrenic-specific transcriptional programs shape respiratory motor output
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  77. elifesciences.org elifesciences.org
    Amplification of a broad transcriptional program by a common factor triggers the meiotic cell cycle in mice
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  78. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Malignant Transformation Involving CXXC4 Mutations Identified in a Leukemic Progression Model of Severe Congenital Neutropenia
    1
    1. scibot 04 Sep 2020
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      DOI: 10.1016/j.xcrm.2020.100074

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  79. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Recruitment of mRNAs to P granules by condensation with intrinsically-disordered proteins
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      DOI: 10.7554/eLife.52896

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  80. Jan 2020
  81. www.sciencedirect.com www.sciencedirect.com
    P Granules Protect RNA Interference Genes from Silencing by piRNAs
    1
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      DOI: 10.1016/j.devcel.2019.07.026

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  82. www.sciencedirect.com www.sciencedirect.com
    SMUG1 Promotes Telomere Maintenance through Telomerase RNA Processing
    1
    1. scibot 13 Jan 2020
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      DOI: 10.1016/j.celrep.2019.07.040

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  83. www.sciencedirect.com www.sciencedirect.com
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      DOI: 10.1016/j.immuni.2018.12.021

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      DOI: 10.1016/j.immuni.2018.12.010

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  85. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  86. Nov 2018
  87. www.sciencedirect.com www.sciencedirect.com
    Phosphorylation of the Ribosomal Protein RPL12/uL11 Affects Translation during Mitosis
    1
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    Single Cell and Open Chromatin Analysis Reveals Molecular Origin of Epidermal Cells of the Skin
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  89. www.sciencedirect.com www.sciencedirect.com
    Light Affects Mood and Learning through Distinct Retina-Brain Pathways
    1
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  90. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  91. www.sciencedirect.com www.sciencedirect.com
    EMT Subtype Influences Epithelial Plasticity and Mode of Cell Migration
    1
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  92. elifesciences.org elifesciences.org
    Social interaction-induced activation of RNA splicing in the amygdala of microbiome-deficient mice
    1
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  93. www.frontiersin.org www.frontiersin.org
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    frontiersin.org/article/10.3389/fnagi.2018.00102/full
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  95. academic.oup.com academic.oup.com
    Regulation of Gene Expression by Thyroid Hormone in Primary Astrocytes: Factors Influencing the Genomic Response
    1
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  96. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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    ncbi.nlm.nih.gov/pmc/articles/PMC5734877/
  97. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  98. europepmc.org europepmc.org
    Context-dependent deposition and regulation of mRNAs in P-bodies.
    1
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  99. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  100. europepmc.org europepmc.org
    A high-resolution mRNA expression time course of embryonic development in zebrafish.
    1
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  101. europepmc.org europepmc.org
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  102. Nov 2017
  103. www.sciencedirect.com www.sciencedirect.com
    A Stat6/Pten Axis Links Regulatory T Cells with Adipose Tissue Function
    1
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  104. www.sciencedirect.com www.sciencedirect.com
    Quaking RNA-Binding Proteins Control Early Myofibril Formation by Modulating Tropomyosin
    1
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  105. europepmc.org europepmc.org
    Dosage compensation and sex-specific epigenetic landscape of the X chromosome in the pea aphid.
    1
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    europepmc.org/articles/PMC5471693/
  106. www.sciencedirect.com www.sciencedirect.com
    Resolving Heart Regeneration by Replacement Histone Profiling
    1
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