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Encapsulation of colistin using hyaluronic acid and PVA–PSS polymeric nanocarriers for enhanced drug delivery: a molecular dynamics simulation study

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1. scibot 11 Jul 2026
  
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  RRID:SCR_012820
  
  DOI: 10.1038/s41598-026-47021-8
  
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pmc.ncbi.nlm.nih.gov/articles/PMC13346572/
Jun 2026
onlinelibrary.wiley.com onlinelibrary.wiley.com

Benzo[e][1,2,4]triazolo[1,5-c][1,2,3]triazines: Design, Synthesis, and Cytotoxic Effects

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1. scibot 30 Jun 2026
  
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  RRID:SCR_012820
  
  DOI: 10.1002/cbdv.71416
  
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onlinelibrary.wiley.com/doi/10.1002/cbdv.71416
elifesciences.org elifesciences.org

The structural context of mutations in proteins predicts their effect on antibiotic resistance

1
1. scibot 27 Jun 2026
  
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  RCSB Protein Data Bank
  
  DOI: 10.7554/eLife.109450.1
  
  Resource: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) (RRID:SCR_012820)
  
  Curator: @areedewitt04
  
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elifesciences.org/reviewed-preprints/109450v1
journals.plos.org journals.plos.org

Evolutionary analysis of transcription elongation factors reveals conserved and lineage-specific regulatory domains

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1. scibot 19 Jun 2026
  
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  DOI: 10.1371/journal.pbio.3003855
  
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journals.plos.org/plosbiology/article
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Reduced cell-substrate adhesion formation promotes cell migration in Dictyostelium

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1. scibot 13 Jun 2026
  
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  SCR_012820
  
  DOI: 10.1091/mbc.E25-05-0230
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12367306/
Apr 2026
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Integrated bulk RNA-seq and scRNA-seq identification of a novel “PET-SPI1-MYL9” transcriptional axis in lung adenocarcinoma driven by polyethylene terephthalate exposure

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1. scibot 14 Apr 2026
  
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  RRID:SCR_012820
  
  DOI: 10.21037/tcr-2025-1-2630
  
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pmc.ncbi.nlm.nih.gov/articles/PMC13067007/
www.microbiologyresearch.org www.microbiologyresearch.org

Systematic characterization of PBP2 as the primary siderophore recognizer in Actinomycetes and other Gram-positive bacteria

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1. scibot 09 Apr 2026
  
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  RRID:SCR_012820
  
  DOI: 10.1099/mgen.0.001671
  
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microbiologyresearch.org/content/journal/mgen/10.1099/mgen.0.001671
Mar 2026
www.biorxiv.org www.biorxiv.org

PRMT5 is Frequently Upregulated and a Potential Therapeutic Target in MTAP-deficient Malignant Peripheral Nerve Sheath Tumors

1
1. scibot 19 Mar 2026
  
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  RRID:SCR_012820
  
  DOI: 10.64898/2026.03.09.710638
  
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biorxiv.org/content/10.64898/2026.03.09.710638v1
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BPS Publications

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1. scibot 19 Mar 2026
  
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  DOI: 10.1111/bph.70383
  
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bpspubs.onlinelibrary.wiley.com/doi/10.1111/bph.70383
www.sciencedirect.com www.sciencedirect.com

Paralog interference contributes to the preservation of genetic redundancy

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1. scibot 03 Mar 2026
  
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  DOI: 10.1016/j.cub.2026.01.073
  
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sciencedirect.com/science/article/pii/S0960982226001454
Feb 2026
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Ze-qi Decoction Inhibits Neutrophil Extracellular Trap Formation to Suppress the Progression and Metastasis of Non-Small Cell Lung Cancer

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1. scibot 19 Feb 2026
  
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  RRID:SCR_012820
  
  DOI: 10.1177/15347354261420750
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12909755/
Jan 2026
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C-X-C motif chemokine ligand 13 suppresses osteoclast differentiation via interference with RANKL–RANK interaction

1
1. scibot 28 Jan 2026
  
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  RRID:SCR_012820
  
  DOI: 10.3389/fimmu.2025.1729222
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12827643/
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Cannabidiol suppresses emergency MDSCs generation by disturbing EEF1B2-mediated C/EBPβ protein synthesis in colorectal adenomas

1
1. scibot 16 Jan 2026
  
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  RRID:SCR_012820
  
  DOI: 10.1136/jitc-2025-013081
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12766802/
www.nature.com www.nature.com

PDZRN4 suppresses lung adenocarcinoma progression via inhibiting ubiquitin-mediated HIF-1A degradation

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1. scibot 06 Jan 2026
  
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  DOI: 10.1038/s41388-025-03670-z
  
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nature.com/articles/s41388-025-03670-z
Oct 2025
www.molbiolcell.org www.molbiolcell.org

Reduced cell-substrate adhesion formation promotes cell migration in Dictyostelium

1
1. scibot 29 Oct 2025
  
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  SCR_012820
  
  DOI: 10.1091/mbc.E25-05-0230
  
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molbiolcell.org/doi/10.1091/mbc.E25-05-0230
www.sciencedirect.com www.sciencedirect.com

The Myo2 adaptor Ldm1 and its receptor Ldo16 mediate actin-dependent lipid droplet motility

1
1. scibot 28 Oct 2025
  
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  DOI: 10.1016/j.celrep.2025.116475
  
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sciencedirect.com/science/article/pii/S221112472501246X
www.biorxiv.org www.biorxiv.org

Somatic evolution of prostate cancer: mutation, selection, and epistasis across disease stages

1
1. scibot 07 Oct 2025
  
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  RRID:SCR_012820
  
  DOI: 10.1101/2025.09.25.678387
  
  Resource: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) (RRID:SCR_012820)
  
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biorxiv.org/content/10.1101/2025.09.25.678387v1
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Proteome mining of Yersinia Enterocolitica for drug targets and computational inhibitor identification with ADMET, anti-inflammation potential and formulation characteristics

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1. scibot 02 Oct 2025
  
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  DOI: 10.1186/s13040-025-00482-5
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12482588/
Sep 2025
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Repurposing rupatadine as topical treatment against methicillin-resistant Staphylococcus aureus

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1. scibot 27 Sep 2025
  
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  RRID:SCR_012820
  
  DOI: 10.1186/s13568-025-01947-w
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12457276/
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Bacterial anti-toxin HigA dysregulates host intestinal serotonin homeostasis in a T6SS-dependent manner

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1. scibot 03 Sep 2025
  
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  RRID:SCR_012820
  
  DOI: 10.1016/j.celrep.2025.116212
  
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sciencedirect.com/science/article/pii/S2211124725009830
Aug 2025
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Sequence- and structure-based bioinformatic screening for potential Theileria parva transport-related proteins

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1. scibot 30 Aug 2025
  
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  RRID:SCR_012820
  
  DOI: 10.1016/j.compbiolchem.2025.108653
  
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sciencedirect.com/science/article/pii/S1476927125003147
faseb.onlinelibrary.wiley.com faseb.onlinelibrary.wiley.com

Rationally Designed Functionalized Phytochemical-Conjugated Fullerene Quantum Dots Inhibiting Viral Chaperone Activity and RNA-Dependent RNA Polymerase in Nipah Virus

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1. scibot 05 Aug 2025
  
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  RRID:SCR_012820
  
  DOI: 10.1096/fj.202501100R
  
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faseb.onlinelibrary.wiley.com/doi/10.1096/fj.202501100R
Jul 2025
52.53.155.43 52.53.155.43

bilinovich-et-al-2025-methyl-cpg-binding-domain-as-a-protein-interaction-partner-in-promoter-regulation-and-html.html

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1. scibot 29 Jul 2025
  
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  DOI: 10.6084/m9.figshare.29361725.v1
  
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52.53.155.43/71efcdc483a88b8314a69385c8ba7fc2816578e0/bilinovich-et-al-2025-methyl-cpg-binding-domain-as-a-protein-interaction-partner-in-promoter-regulation-and-html.html
www.sciencedirect.com www.sciencedirect.com

SeaMoon: From protein language models to continuous structural heterogeneity

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1. scibot 19 Jul 2025
  
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  DOI: 10.1016/j.str.2025.06.010
  
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sciencedirect.com/science/article/pii/S0969212625002448
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Monoallelic mutations in MMD2 cause autosomal dominant aggressive periodontitis

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1. scibot 17 Jul 2025
  
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  RRID:SCR_012820
  
  DOI: 10.1084/jem.20231911
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12262042/
Jun 2025
link.springer.com link.springer.com

Molecular Docking, Phytochemical Screening and Evaluation of Balliospermum montanum Roots for its Antihyperlipidemic Potential

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1. scibot 17 Jun 2025
  
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  RRID:SCR_012820
  
  DOI: 10.1007/s12013-025-01790-7
  
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link.springer.com/article/10.1007/s12013-025-01790-7
52.53.155.43 52.53.155.43

PDF-html.html

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1. scibot 15 Jun 2025
  
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  DOI: 10.1101/2024.03.19.585764
  
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52.53.155.43/e04e74c2598ab754b1f531f62f1399ba435a74bd/PDF-html.html
Apr 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Identification of a TNIK-CDK9 Axis as a Targetable Strategy for Platinum-Resistant Ovarian Cancer

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1. scibot 04 Apr 2025
  
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  RRID:SCR_012820
  
  DOI: 10.1158/1535-7163.MCT-24-0785
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11962390/
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Genetically encoded reporters of actin filament organization in living cells and tissues

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1. scibot 03 Apr 2025
  
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  RRID:SCR_012820
  
  DOI: 10.1016/j.cell.2025.03.003
  
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sciencedirect.com/science/article/pii/S0092867425002764
Mar 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

23ME-01473, an Fc Effector–Enhanced Anti-ULBP6/2/5 Antibody, Restores NK Cell–Mediated Antitumor Immunity through NKG2D and FcγRIIIa Activation

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1. scibot 27 Mar 2025
  
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  DOI: 10.1158/2767-9764.CRC-24-0478
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11927390/
www.nature.com www.nature.com

Sporophyte-directed gametogenesis in Arabidopsis

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1. scibot 25 Mar 2025
  
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  RRID:SCR_012820
  
  DOI: 10.1038/s41477-025-01932-y
  
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  Curator: @dhovakimyan1
  
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nature.com/articles/s41477-025-01932-y
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Lineage-Specific Class-A GPCR Dynamics Reflect Diverse Chemosensory Adaptations in Lophotrochozoa

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1. scibot 13 Mar 2025
  
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  RRID:SCR_012820
  
  DOI: 10.1093/molbev/msaf042
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11886862/
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A comprehensive study on the impact of Ligustrum vicaryi L. fruit polysaccharide on myocardial fibrosis through animal experiments, network pharmacology and molecular docking

1
1. scibot 08 Mar 2025
  
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  RRID:SCR_012820
  
  DOI: 10.3389/fcvm.2025.1470761
  
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Structure of WzxE the lipid III flippase for Enterobacterial Common Antigen polysaccharide

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PDF-html.html

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Nanobodies against the myelin enzyme CNPase as tools for structural and functional studies

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In silico drug repurposing using molecular docking and dynamics to target the protein interaction between the SARS-CoV-2 S-glycoprotein and the ACE2 receptor

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β-chitosan attenuates hepatic macrophage-driven inflammation and reverses aging-related cognitive impairment

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A Complex Interplay Between Melatonin and RORβ: RORβ is Unlikely a Putative Receptor for Melatonin as Revealed by Biophysical Assays

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The Development of an Automated Computational Workflow to Prioritize Potential Resistance Variants.

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Functional genomic analysis of genes important for Candida albicans fitness in diverse environmental conditions

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Symmetrical Bispyridinium Compounds Act as Open Channel Blockers of Cation-Selective Ion Channels

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Supplemental_Materials (1)-html.html

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Spooky nameless page

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They all rock: A systematic comparison of conformational movements in LeuT-fold transporters

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The Development of an Automated Computational Workflow to Prioritize Potential Resistance Variants.

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Evolutionary Dynamics of Lineage-Specific Class-A GPCR Subsets Reveal Widespread Chemosensory Roles and Adaptations in Lophotrochozoa

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Developing potential drugs for insomnia through computational analysis

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TNFRSF19 within the 13q12.12 risk locus functions as a lung cancer suppressor by binding Wnt3a to inhibit Wnt/β-catenin signaling.

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Developing potential drugs for insomnia through computational analysis

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The role of genetic polymorphisms in the sulfation of pregnenolone by human cytosolic sulfotransferase SULT2B1a

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Feb 2024
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d4-html.html

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Integrating Network Pharmacology and Experimental Verification to Explore the Pharmacological Mechanisms of Radix Paeoniae Rubra Against Glioma

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<i>In silico</i> drug repurposing using molecular docking and dynamics to target the protein interaction between the SARS-CoV-2 S-glycoprotein and the ACE2 receptor

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The role of genetic polymorphisms in the sulfation of pregnenolone by human cytosolic sulfotransferase SULT2B1a

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Myelin abnormalities in merosin-deficient congenital muscular dystrophy

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Evolution and functional role prediction of the CYP6DE and CYP6DJ subfamilies in Dendroctonus (Curculionidae: Scolytinae) bark beetles

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Developing potential drugs for insomnia through computational analysis

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Virtual Screening, Molecular Docking, and Dynamic Simulations Revealed TGF-β1 Potential Inhibitors to Curtail Cervical Cancer Progression

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F1000Research Article: Pharmacokinetic and pharmacodynamic profiling of compounds similar to paracetamol from zinc database: an <i>in silico</i> analysis.

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3D-informed targeting of the Trop-2 signal-activation site drives selective cancer vulnerability

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The genomic landscape of sensitivity to arsenic trioxide uncovered by genome-wide CRISPR-Cas9 screening

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Bacterial NLR-related proteins protect against phage

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A new approach for extracting information from protein dynamics

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New biochemistry in the Rhodanese-phosphatase superfamily: emerging roles in diverse metabolic processes, nucleic acid modifications, and biological conflicts

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Structures of NF-κB p52 homodimer-DNA complexes rationalize binding mechanisms and transcription activation

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β-glucan protects against necrotizing enterocolitis in mice by inhibiting intestinal inflammation, improving the gut barrier, and modulating gut microbiota

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Protocol to identify host-viral protein interactions between coagulation-related proteins and their genetic variants with SARS-CoV-2 proteins

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Prediction of the effects of the top 10 nonsynonymous variants from 30229 SARS-CoV-2 strains on their proteins

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Mussel-inspired monomer – A new selective protease inhibitor against dentine collagen degradation

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Novel variants underlying autosomal recessive neurodevelopmental disorders with intellectual disability in Iranian consanguineous families

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F1000Research Article: Prediction of the Effects of Nonsynonymous Variants on SARS-CoV-2 Proteins.

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Balancing of mitochondrial translation through METTL8-mediated m3C modification of mitochondrial tRNAs

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Cheonggukjang-Specific Component 1,3-Diphenyl-2-Propanone as a Novel PPARα/γ Dual Agonist: An In Vitro and In Silico Study

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Expression and distribution of synaptotagmin family members in the zebrafish retina

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Simulating PIP2-Induced Gating Transitions in Kir6.2 Channels

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Reconstitution of the destruction complex defines roles of AXIN polymers and APC in β-catenin capture, phosphorylation, and ubiquitylation

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Structure of Vps4 with circular peptides and implications for translocation of two polypeptide chains by AAA+ ATPases

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Structural basis of protein translocation by the Vps4-Vta1 AAA ATPase

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Tryptophan Improves Memory Independent of Its Role as a Serotonin Precursor: Potential Involvement of Microtubule Proteins

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The AAA ATPase Vps4 binds ESCRT-III substrates through a repeating array of dipeptide-binding pockets.

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Coarse-Grained Conformational Sampling of Protein Structure Improves the Fit to Experimental Hydrogen-Exchange Data

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Solution and crystal structures of a C-terminal fragment of the neuronal isoform of the polypyrimidine tract binding protein (nPTB)

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Repurposing of synaptonemal complex proteins for kinetochores in Kinetoplastida

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BPS Publications

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The endogenous galactofuranosidase GlfH1 hydrolyzes mycobacterial arabinogalactan

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Dental workers in front-line of COVID-19: an in silico evaluation targeting their prevention

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Integrative identification of the pathogenic role of a novel G6PD missense mutation c.697G>C

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ncbi.nlm.nih.gov/pmc/articles/PMC7940930/
Feb 2021
bpspubs.onlinelibrary.wiley.com bpspubs.onlinelibrary.wiley.com

Arctigenin protects against depression by inhibiting microglial activation and neuroinflammation via HMGB1/TLR4/NF‐κB and TNF‐α/TNFR1/NF‐κB pathways

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1. scibot 26 Feb 2021
  
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  RRID:SCR_012820
  
  DOI: 10.1111/bph.15261
  
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bpspubs.onlinelibrary.wiley.com/doi/10.1111/bph.15261
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Adeno-associated virus-binding antibodies detected in cats living in the Northeastern United States lack neutralizing activity

1
1. scibot 25 Feb 2021
  
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  RRID:SCR_012820
  
  DOI: 10.1038/s41598-020-66596-4
  
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europepmc.org/article/MED/32572045
Nov 2020
onlinelibrary.wiley.com onlinelibrary.wiley.com

Conformational stability of the bacterial adhesin, FimH, with an inactivating mutation

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1. scibot 20 Nov 2020
  
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  RRID:SCR_012820
  
  DOI: 10.1002/prot.26013
  
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onlinelibrary.wiley.com/doi/10.1002/prot.26013
Oct 2020
link.springer.com link.springer.com

Molecular analysis of a fibrin-degrading enzyme from Bacillus subtilis K2 isolated from the Indonesian soybean-based fermented food moromi

1
1. scibot 30 Oct 2020
  
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  RRID:SCR_012820
  
  DOI: 10.1007/s11033-020-05898-2
  
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link.springer.com/article/10.1007/s11033-020-05898-2
Sep 2020
elifesciences.org elifesciences.org

Structure of RNA polymerase bound to ribosomal 30S subunit

1
1. scibot 26 Sep 2020
  
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  RRID:SCR_012820
  
  DOI: 10.7554/eLife.28560
  
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Genetic variation regulates opioid-induced respiratory depression in mice

1
1. scibot 17 Sep 2020
  
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  DOI: 10.1038/s41598-020-71804-2
  
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Adeno-associated virus-binding antibodies detected in cats living in the Northeastern United States lack neutralizing activity

1
1. scibot 06 Sep 2020
  
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  RRID:SCR_012820
  
  DOI: 10.1038/s41598-020-66596-4
  
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europepmc.org/article/MED/32572045
Jan 2020
elifesciences.org elifesciences.org

The role of structural pleiotropy and regulatory evolution in the retention of heteromers of paralogs

1
1. scibot 13 Jan 2020
  
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  RRID:SCR_012820
  
  DOI: 10.7554/eLife.46754
  
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elifesciences.org/articles/46754
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The high genetic barrier of EFdA/MK-8591 stems from strong interactions with the active site of drug-resistant HIV-1 reverse transcriptase

1
1. scibot 13 Jan 2020
  
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  RRID:SCR_012820
  
  DOI: 10.1016/j.chembiol.2018.07.014
  
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ncbi.nlm.nih.gov/pmc/articles/PMC6261781/
academic.oup.com academic.oup.com

Foundry: a message-oriented, horizontally scalable ETL system for scientific data integration and enhancement

2
1. scibot 13 Jan 2020
  
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  RRID:SCR_012820
  
  DOI: 10.1093/database/bay130
  
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2. scibot 13 Jan 2020
  
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  RRID:SCR_012820
  
  DOI: 10.1093/database/bay130
  
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academic.oup.com/database/article/doi/10.1093/database/bay130/5255189
Apr 2019
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Solution and crystal structures of a C-terminal fragment of the neuronal isoform of the polypyrimidine tract binding protein (nPTB)

2
1. scibot 05 Apr 2019
  
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  nif-0000-00135
  
  Curator: @gabimpine
  
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2. scibot 05 Apr 2019
  
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  nif-0000-00135
  
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ncbi.nlm.nih.gov/pmc/articles/PMC3961105
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Discovery of new protein families and functions: new challenges in functional metagenomics for biotechnologies and microbial ecology

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1. scibot 05 Apr 2019
  
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  nif-0000-00135
  
  Curator: @jcabotaj
  
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ncbi.nlm.nih.gov/pmc/articles/PMC4456863/
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Evidence from molecular dynamics simulations of conformational preorganization in the ribonuclease H active site

1
1. scibot 05 Apr 2019
  
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  nif-0000-00135
  
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ncbi.nlm.nih.gov/pmc/articles/PMC4032109
Nov 2018
onlinelibrary.wiley.com onlinelibrary.wiley.com

Untitled document

1
1. scibot 05 Nov 2018
  
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  Curator: @Jmenke
  
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onlinelibrary.wiley.com/doi/full/10.1111/jnc.14322
europepmc.org europepmc.org

Untitled document

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1. scibot 05 Nov 2018
  
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europepmc.org/articles/PMC5644950/
Nov 2017
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Untitled document

1
1. scibot 08 Nov 2017
  
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ncbi.nlm.nih.gov/pmc/articles/PMC5655137/
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Untitled document

1
1. scibot 08 Nov 2017
  
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ncbi.nlm.nih.gov/pmc/articles/PMC5644950/
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Single-protein detection in crowded molecular environments in cryo-EM images

1
1. scibot 08 Nov 2017
  
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  SCR_012820
  
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ncbi.nlm.nih.gov/pmc/articles/PMC5453696/
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Structural basis of protein translocation by the Vps4-Vta1 AAA ATPase

1
1. scibot 08 Nov 2017
  
  in Public
  
  SCR_012820
  
  Curator: @kaitlinsung
  
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ncbi.nlm.nih.gov/pmc/articles/PMC5413351/
elifesciences.org elifesciences.org

Mechanism of ribosome rescue by ArfA and RF2

1
1. scibot 08 Nov 2017
  
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  SCR_012820
  
  Curator: @kaitlinsung
  
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elifesciences.org/content/6/e23687
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Region 4 of Rhizobium etli Primary Sigma Factor (SigA) Confers Transcriptional Laxity in Escherichia coli

1
1. scibot 08 Nov 2017
  
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  SCR_012820
  
  Curator: @chewbeccax
  
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ncbi.nlm.nih.gov/pmc/articles/PMC4943231/
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Origin of a folded repeat protein from an intrinsically disordered ancestor

1
1. scibot 08 Nov 2017
  
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  SCR_012820
  
  Curator: @gabimpine
  
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ncbi.nlm.nih.gov/pmc/articles/PMC5074805/
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Pangenome and immuno-proteomics analysis of Acinetobacter baumannii strains revealed the core peptide vaccine targets

1
1. scibot 08 Nov 2017
  
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ncbi.nlm.nih.gov/pmc/articles/PMC5025611/

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