73 Matching Annotations
  1. May 2024
  2. www.cell.com www.cell.com
    Variant-to-function analysis of the childhood obesity chr12q13 locus implicates rs7132908 as a causal variant within the 3′ UTR of FAIM2
    1
    1. scibot 02 May 2024
      RRID:SCR_014966

      DOI: 10.1016/j.xgen.2024.100556

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    cell.com/cell-genomics/fulltext/S2666-979X(24)00122-8
  3. Mar 2024
  4. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    D-2-HG Inhibits IDH1mut Glioma Growth via FTO Inhibition and Resultant m6A Hypermethylation
    1
    1. scibot 27 Mar 2024
      RRID:SCR_014966

      DOI: 10.1158/2767-9764.CRC-23-0271

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    ncbi.nlm.nih.gov/pmc/articles/PMC10959073/
  5. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome-scale requirements for dynein-based transport revealed by a high-content arrayed CRISPR screen
    1
    1. scibot 09 Mar 2024
      RRID:SCR_014966

      DOI: 10.1083/jcb.202306048

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    ncbi.nlm.nih.gov/pmc/articles/PMC10916854/
  6. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    De novo and histologically transformed small cell lung cancer is sensitive to lurbinectedin treatment through the modulation of EMT and NOTCH signaling pathways
    1
    1. scibot 03 Mar 2024
      RRID:SCR_014966

      DOI: 10.1158/1078-0432.CCR-23-0471

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    ncbi.nlm.nih.gov/pmc/articles/PMC10901109/
  7. Feb 2024
  8. aacrjournals.org aacrjournals.org
    p53R245W mutation fuels cancer initiation and metastases in NASH-driven liver tumorigenesis
    1
    1. scibot 27 Feb 2024
      RRID:SCR_014966

      DOI: 10.1158/2767-9764.CRC-23-0218

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    aacrjournals.org/cancerrescommun/article/3/12/2640/732161/p53R245W-Mutation-Fuels-Cancer-Initiation-and
  9. www.biorxiv.org www.biorxiv.org
    A Mutation-driven oncofetal regression fuels phenotypic plasticity in colorectal cancer
    1
    1. scibot 09 Feb 2024
      RRID:SCR_014966

      DOI: 10.1101/2023.12.10.570854

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    biorxiv.org/content/10.1101/2023.12.10.570854v1
  10. www.nature.com www.nature.com
    A clinically applicable connectivity signature for glioblastoma includes the tumor network driver CHI3L1
    1
    1. scibot 08 Feb 2024
      RRID:SCR_014966

      DOI: 10.1038/s41467-024-45067-8

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    nature.com/articles/s41467-024-45067-8
  11. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome-wide p63-target gene analyses reveal TAp63/NRF2-dependent oxidative stress responses
    1
    1. scibot 03 Feb 2024
      RRID:SCR_014966

      DOI: 10.1158/2767-9764.CRC-23-0358

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    ncbi.nlm.nih.gov/pmc/articles/PMC10832605/
  12. Jan 2024
  13. www.nature.com www.nature.com
    A new genomic framework to categorize pediatric acute myeloid leukemia
    1
    1. scibot 18 Jan 2024
      RRID:SCR_014966

      DOI: 10.1038/s41588-023-01640-3

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    nature.com/articles/s41588-023-01640-3
  14. www.sciencedirect.com www.sciencedirect.com
    Integrative analysis of neuroblastoma by single-cell RNA sequencing identifies the NECTIN2-TIGIT axis as a target for immunotherapy
    2
    1. scibot 11 Jan 2024
      RRID:SCR_014966

      DOI: 10.1016/j.ccell.2023.12.008

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    2. scibot 11 Jan 2024
      RRID:SCR_014966

      DOI: 10.1016/j.ccell.2023.12.008

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    sciencedirect.com/science/article/pii/S1535610823004361
  15. aacrjournals.org aacrjournals.org
    p53R245W mutation fuels cancer initiation and metastases in NASH-driven liver tumorigenesis
    1
    1. scibot 06 Jan 2024
      RRID:SCR_014966

      DOI: 10.1158/2767-9764.CRC-23-0218

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    aacrjournals.org/cancerrescommun/article/3/12/2640/732161/p53R245W-Mutation-Fuels-Cancer-Initiation-and
  16. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Targeting DNA Repair and Survival Signaling in Diffuse Intrinsic Pontine Gliomas to Prevent Tumor Recurrence
    1
    1. scibot 05 Jan 2024
      RRID:SCR_014966

      DOI: 10.1158/1535-7163.MCT-23-0026

      Resource: GENCODE (RRID:SCR_014966)

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    ncbi.nlm.nih.gov/pmc/articles/PMC10762335/
  17. Nov 2023
  18. dx.doi.org dx.doi.org
    Population-specific Mutation Patterns in Breast Tumors from African American, European American, and Kenyan Patients
    1
    1. scibot 10 Nov 2023
      RRID:SCR_014966

      DOI: 10.1158/2767-9764.CRC-23-0165

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    dx.doi.org/10.1158/2767-9764.CRC-23-0165
  19. www.sciencedirect.com www.sciencedirect.com
    Tissue-specific and tissue-agnostic effects of genome sequence variation modulating blood pressure
    1
    1. scibot 03 Nov 2023
      RRID:SCR_014966

      DOI: 10.1016/j.celrep.2023.113351

      Resource: GENCODE (RRID:SCR_014966)

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    sciencedirect.com/science/article/pii/S2211124723013633
  20. Oct 2023
  21. www.sciencedirect.com www.sciencedirect.com
    Transcriptomic and proteomic profiling reveals distinct pathogenic features of peripheral non-classical monocytes in systemic lupus erythematosus
    1
    1. scibot 06 Oct 2023
      RRID:SCR_014966

      DOI: 10.1016/j.clim.2023.109765

      Resource: GENCODE (RRID:SCR_014966)

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    sciencedirect.com/science/article/pii/S1521661623005284
  22. Sep 2023
  23. www.sciencedirect.com www.sciencedirect.com
    Single-cell multi-omics defines the cell-type-specific impact of splicing aberrations in human hematopoietic clonal outgrowths
    1
    1. scibot 29 Sep 2023
      RRID:SCR_014966

      DOI: 10.1016/j.stem.2023.07.012

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    sciencedirect.com/science/article/pii/S1934590923002576
  24. Aug 2023
  25. www.biorxiv.org www.biorxiv.org
    Variant-to-function analysis of the childhood obesity chr12q13 locus implicates rs7132908 as a causal variant within the 3’ UTR of FAIM2
    1
    1. scibot 27 Aug 2023
      RRID:SCR_014966

      DOI: 10.1101/2023.08.21.553157

      Resource: GENCODE (RRID:SCR_014966)

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    biorxiv.org/content/10.1101/2023.08.21.553157v1
  26. Jul 2023
  27. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A network-based approach reveals long non-coding RNAs associated with disease activity in lupus nephritis: key pathways for flare and potential biomarkers to be used as liquid biopsies
    1
    1. scibot 21 Jul 2023
      SCR_014966

      DOI: 10.3389/fimmu.2023.1203848

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    ncbi.nlm.nih.gov/pmc/articles/PMC10355154/
  28. Jun 2023
  29. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    DAB2IP Is a Bifunctional Tumor Suppressor That Regulates Wild-Type RAS and Inflammatory Cascades in KRAS Mutant Colon Cancer
    1
    1. scibot 07 Jun 2023
      RRID:SCR_014966

      DOI: 10.1158/0008-5472.CAN-22-0370

      Resource: GENCODE (RRID:SCR_014966)

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    ncbi.nlm.nih.gov/pmc/articles/PMC10236151/
  30. May 2023
  31. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Adipose tissue plasticity in pheochromocytoma patients suggests a role of the splicing machinery in human adipose browning
    1
    1. scibot 27 May 2023
      RRID:SCR_01496

      DOI: 10.1016/j.isci.2023.106847

      Resource: GENCODE (RRID:SCR_014966)

      Curator: @evieth

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    ncbi.nlm.nih.gov/pmc/articles/PMC10209542/
  32. Mar 2023
  33. www.sciencedirect.com www.sciencedirect.com
    Nicotinamide riboside supplementation is not associated with altered methylation homeostasis in Parkinson’s disease
    1
    1. scibot 11 Mar 2023
      RRID:SCR_014966

      DOI: 10.1016/j.isci.2023.106278

      Resource: GENCODE (RRID:SCR_014966)

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    sciencedirect.com/science/article/pii/S2589004223003553
  34. Jan 2023
  35. www.sciencedirect.com www.sciencedirect.com
    Enrichment of oral-derived bacteria in inflamed colorectal tumors and distinct associations of Fusobacterium in the mesenchymal subtype
    1
    1. scibot 27 Jan 2023
      RRID:SCR_014966

      DOI: 10.1016/j.xcrm.2023.100920

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    sciencedirect.com/science/article/pii/S2666379123000058
  36. Dec 2022
  37. www.mdpi.com www.mdpi.com
    Pancreatic Islet Cells Response to IFNγ Relies on Their Spatial Location within an Islet
    1
    1. scibot 31 Dec 2022
      RRID:SCR_014966

      DOI: 10.3390/cells12010113

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    mdpi.com/2073-4409/12/1/113
  38. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Anti-cancer activity of ST101, a novel antagonist of CCAAT/enhancer binding protein β
    1
    1. scibot 16 Dec 2022
      RRID:SCR_014966

      DOI: 10.1158/1535-7163.MCT-21-0962

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    ncbi.nlm.nih.gov/pmc/articles/PMC9630826/
  39. 52.53.155.43 52.53.155.43
    ccr-22-1665-html.html
    1
    1. scibot 02 Dec 2022
      RRID:SCR_014966

      DOI: 10.1158/1078-0432.ccr-22-1665

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    52.53.155.43/515d4d4023662e50c93811fcbe9244577bb21db8/ccr-22-1665-html.html
  40. Oct 2022
  41. 52.53.155.43 52.53.155.43
    ccr-22-1665-html.html
    1
    1. scibot 27 Oct 2022
      RRID:SCR_014966

      DOI: 10.1158/1078-0432.ccr-22-1665

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    52.53.155.43/515d4d4023662e50c93811fcbe9244577bb21db8/ccr-22-1665-html.html
  42. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Human WDR5 promotes breast cancer growth and metastasis via KMT2-independent translation regulation
    1
    1. scibot 25 Oct 2022
      RRID:SCR_014966

      DOI: 10.7554/eLife.78163

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    ncbi.nlm.nih.gov/pmc/articles/PMC9584608/
  43. Sep 2022
  44. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Intracellular cholesterol pools regulate oncogenic signaling and epigenetic circuitries in Early T-cell Precursor Acute Lymphoblastic Leukemia
    1
    1. scibot 02 Sep 2022
      RRID:SCR_014966

      DOI: 10.1158/2159-8290.CD-21-0551

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    ncbi.nlm.nih.gov/pmc/articles/PMC8904296/
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Integrative RNA-omics discovers GNAS alternative splicing as a phenotypic driver of splicing factor-mutant neoplasms
    1
    1. scibot 02 Sep 2022
      RRID:SCR_01496

      DOI: 10.1158/2159-8290.CD-21-0508

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      RRIDCUR:Incorrect RRID:SCR_014966 RRIDCUR:Unresolved
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    ncbi.nlm.nih.gov/pmc/articles/PMC8904276/
  46. Jun 2022
  47. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comprehensive surfaceome profiling to identify and validate novel cell-surface targets in osteosarcoma
    1
    1. scibot 15 Jun 2022
      RRID:SCR_014966

      DOI: 10.1158/1535-7163.MCT-21-0836

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    ncbi.nlm.nih.gov/pmc/articles/PMC9167717/
  48. www.nature.com www.nature.com
    Ptpn1 deletion protects oval cells against lipoapoptosis by favoring lipid droplet formation and dynamics
    1
    1. scibot 14 Jun 2022
      RRID:SCR_014966

      DOI: 10.1038/s41418-022-01023-x

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    nature.com/articles/s41418-022-01023-x
  49. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Global-run on sequencing identifies Gm11967 as an Akt-dependent long noncoding RNA involved in insulin sensitivity
    1
    1. scibot 07 Jun 2022
      RRID:SCR_014966

      DOI: 10.1016/j.isci.2022.104410

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    ncbi.nlm.nih.gov/pmc/articles/PMC9156944/
  50. May 2022
  51. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Leveraging Allele-Specific Expression for Therapeutic Response Gene Discovery in Glioblastoma
    1
    1. scibot 24 May 2022
      RRID:SCR_014966

      DOI: 10.1158/0008-5472.CAN-21-0810

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    ncbi.nlm.nih.gov/pmc/articles/PMC9122831/
  52. aacrjournals.org aacrjournals.org
    Differential gain-of-function activity of three p53 hotspot mutants in vivo
    1
    1. scibot 19 May 2022
      RRID:SCR_014966

      DOI: 10.1158/0008-5472.CAN-21-3376

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    aacrjournals.org/cancerres/article/82/10/1926/696328/Differential-Gain-of-Function-Activity-of-Three
  53. www.biorxiv.org www.biorxiv.org
    An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types
    1
    1. scibot 14 May 2022
      RRID:SCR_014966

      DOI: 10.1101/2020.02.29.970558

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    biorxiv.org/content/10.1101/2020.02.29.970558v2
  54. Apr 2022
  55. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The need to reassess single-cell RNA sequencing datasets: the importance of biological sample processing
    1
    1. scibot 12 Apr 2022
      RRID:SCR_014966

      DOI: 10.12688/f1000research.54864.2

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    ncbi.nlm.nih.gov/pmc/articles/PMC8984215/
  56. aacrjournals.org aacrjournals.org
    CIC-mediated modulation of MAPK signaling opposes receptor tyrosine kinase inhibitor response in kinase-addicted sarcoma
    1
    1. scibot 05 Apr 2022
      RRID:SCR_014966

      DOI: 10.1158/0008-5472.CAN-21-1397

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    aacrjournals.org/cancerres/article/82/6/1110/682069/CIC-Mediated-Modulation-of-MAPK-Signaling-Opposes
  57. Dec 2021
  58. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Deconvolution of Bulk Gene Expression Profiles with Single-Cell Transcriptomics to Develop a Cell Type Composition-Based Prognostic Model for Acute Myeloid Leukemia
    1
    1. scibot 04 Dec 2021
      RRID:SCR_014966

      DOI: 10.3389/fcell.2021.762260

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    ncbi.nlm.nih.gov/pmc/articles/PMC8633313/
  59. Nov 2021
  60. www.sciencedirect.com www.sciencedirect.com
    Multi-tumor analysis of cancer-stroma interactomes of patient-derived xenografts unveils the unique homeostatic process in renal cell carcinomas
    1
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  61. Oct 2021
  62. www.nature.com www.nature.com
    An atlas of gene regulatory elements in adult mouse cerebrum
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      DOI: 10.1038/s41586-021-03604-1

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  63. onlinelibrary.wiley.com onlinelibrary.wiley.com
    TPRG1-AS1 induces RBM24 expression and inhibits liver cancer progression by sponging miR-4691-5p and miR-3659
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      DOI: 10.1111/liv.15026

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  64. bpspubs.onlinelibrary.wiley.com bpspubs.onlinelibrary.wiley.com
    A Role for Translational Regulation by S6 Kinase and a Downstream Target in Inflammatory Pain
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  65. www.nature.com www.nature.com
    Comparative cellular analysis of motor cortex in human, marmoset and mouse
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  66. www.nature.com www.nature.com
    A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex
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  67. Sep 2021
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    Transcriptional control of brain tumor stem cells by a carbohydrate binding protein
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  69. Aug 2021
  70. 52.53.155.43 52.53.155.43
    F1000Research Article: The need to reassess single-cell RNA sequencing datasets: more is not always better.
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  72. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The COVIDome Explorer researcher portal
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  74. Jul 2021
  75. www.mdpi.com www.mdpi.com
    Profiling of RNAs from Human Islet-Derived Exosomes in a Model of Type 1 Diabetes
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  76. www.sciencedirect.com www.sciencedirect.com
    Maternal cecal microbiota transfer rescues early-life antibiotic-induced enhancement of type 1 diabetes in mice
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      DOI: 10.1016/j.chom.2021.06.014

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  77. Jun 2021
  78. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Novel role of ASH1L histone methyltransferase in anaplastic thyroid carcinoma
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  79. Mar 2021
  80. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Seroconversion stages COVID19 into distinct pathophysiological states
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  81. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Serial transplantation unmasks galectin-9 contribution to tumor immune escape in the MB49 murine model
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      DOI: 10.1038/s41598-021-84270-1

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  82. academic.oup.com academic.oup.com
    Germline EGFR variants are over-represented in adolescents and young adults (AYA) with adrenocortical carcinoma
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      DOI: 10.1093/hmg/ddaa268

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  83. Feb 2021
  84. www.biorxiv.org www.biorxiv.org
    An Atlas of Gene Regulatory Elements in Adult Mouse Cerebrum
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      DOI: 10.1101/2020.05.10.087585

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  85. Oct 2020
  86. www.sciencedirect.com www.sciencedirect.com
    Purification of pancreatic endocrine subsets reveals increased iron metabolism in beta-cells
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      DOI: 10.1016/j.molmet.2020.101060

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  87. Sep 2020
  88. elifesciences.org elifesciences.org
    EDF1 coordinates cellular responses to ribosome collisions
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      DOI: 10.7554/eLife.58828

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  89. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level de novo assembly of the pig-tailed macaque genome using linked-read sequencing and HiC proximity scaffolding
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      DOI: 10.1093/gigascience/giaa069

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    Genetic Variation in Type 1 Diabetes Reconfigures the 3D Chromatin Organization of T Cells and Alters Gene Expression
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      DOI: 10.1016/j.immuni.2020.01.003

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  91. Jan 2020
  92. www.sciencedirect.com www.sciencedirect.com
    Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks
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      DOI: 10.1016/j.cell.2019.07.015

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    Active and Repressed Chromatin Domains Exhibit Distinct Nucleosome Segregation during DNA Replication
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      DOI: 10.1016/j.cell.2019.10.009

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      DOI: 10.1016/j.celrep.2019.01.041

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  95. Nov 2018
  96. www.sciencedirect.com www.sciencedirect.com
    LC3-Associated Phagocytosis in Myeloid Cells Promotes Tumor Immune Tolerance
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      Gencode

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  98. www.jneurosci.org www.jneurosci.org
    Palladin Is a Neuron-Specific Translational Target of mTOR Signaling That Regulates Axon Morphogenesis
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  99. www.sciencedirect.com www.sciencedirect.com
    Lineage-Determining Transcription Factor TCF-1 Initiates the Epigenetic Identity of T Cells
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  100. www.cell.com www.cell.com
    The Immune Landscape of Cancer
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    cell.com/immunity/references/S1074-7613(18)30121-3
  101. www.sciencedirect.com www.sciencedirect.com
    The Dynamic Landscape of Open Chromatin during Human Cortical Neurogenesis
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  102. Nov 2017
  103. www.sciencedirect.com www.sciencedirect.com
    Fast, Quantitative and Variant Enabled Mapping of Peptides to Genomes
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  104. www.sciencedirect.com www.sciencedirect.com
    Nucleus-Translocated ACSS2 Promotes Gene Transcription for Lysosomal Biogenesis and Autophagy
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      GENCODE19

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