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  1. Last 7 days
  2. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Single cell long read whole genome sequencing reveals somatic transposon activity in human brain
    1
    1. scibot 21 Dec 2024
      RRID:SCR_014966

      DOI: 10.1101/2024.11.11.24317113

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    pmc.ncbi.nlm.nih.gov/articles/PMC11601780/
  3. Dec 2024
  4. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    H4K20me3-Mediated Repression of Inflammatory Genes is a Characteristic and Targetable Vulnerability of Persister Cancer Cells
    1
    1. scibot 13 Dec 2024
      RRID:SCR_014966

      DOI: 10.1158/0008-5472.CAN-24-0529

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    pmc.ncbi.nlm.nih.gov/articles/PMC7617193/
  5. Nov 2024
  6. 52.53.155.43 52.53.155.43
    can-24-0886-html.html
    1
    1. scibot 07 Nov 2024
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      DOI: 10.1158/0008-5472.can-24-0886

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    52.53.155.43/656f4a916577efff373ec46750afc04546654778/can-24-0886-html.html
  7. 52.53.155.43 52.53.155.43
    can-24-0529-html.html
    1
    1. scibot 07 Nov 2024
      RRID:SCR_014966

      DOI: 10.1158/0008-5472.can-24-0529

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    52.53.155.43/4faeafb6ce934469a644c8bc705adf42bb41b860/can-24-0529-html.html
  8. Oct 2024
  9. aacrjournals.org aacrjournals.org
    RNA sequencing and Immunohistochemistry Reveal ZFN7 as a Stronger Marker of Survival than Molecular Subtypes in G-CIMP–negative Glioblastoma
    1
    1. scibot 02 Oct 2024
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      DOI: 10.1158/1078-0432.CCR-20-2141

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    aacrjournals.org/clincancerres/article/27/2/645/83327/RNA-sequencing-and-Immunohistochemistry-Reveal
  10. aacrjournals.org aacrjournals.org
    Glioblastoma TCGA Mesenchymal and IGS 23 Tumors are Identifiable by IHC and have an Immune-phenotype Indicating a Potential Benefit from Immunotherapy
    1
    1. scibot 02 Oct 2024
      RRID:SCR_014966

      DOI: 10.1158/1078-0432.CCR-20-2171

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    aacrjournals.org/clincancerres/article/26/24/6600/82892/Glioblastoma-TCGA-Mesenchymal-and-IGS-23-Tumors
  11. Sep 2024
  12. www.biorxiv.org www.biorxiv.org
    Metastatic tumor cells in bone marrow differ from paired neuroblastoma tumor and contain subsets with therapy-resistant characteristics
    1
    1. scibot 29 Sep 2024
      RRID:SCR_014966

      DOI: 10.1101/2024.09.13.612231

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    biorxiv.org/content/10.1101/2024.09.13.612231v1
  13. www.biorxiv.org www.biorxiv.org
    A Comprehensive Proteogenomic and Spatial Analysis of Innate and Acquired Resistance of Metastatic Melanoma to Immune Checkpoint Blockade Therapies
    1
    1. scibot 29 Sep 2024
      RRID:SCR_014966

      DOI: 10.1101/2024.09.12.612675

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    biorxiv.org/content/10.1101/2024.09.12.612675v1
  14. Aug 2024
  15. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    p53R172H and p53R245W Hotspot Mutations Drive Distinct Transcriptomes in Mouse Mammary Tumors Through a Convergent Transcriptional Mediator
    1
    1. scibot 21 Aug 2024
      RRID:SCR_014966

      DOI: 10.1158/2767-9764.CRC-24-0128

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    ncbi.nlm.nih.gov/pmc/articles/PMC11310746/
  16. Jul 2024
  17. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    ZNF397 Deficiency Triggers TET2-Driven Lineage Plasticity and AR-Targeted Therapy Resistance in Prostate Cancer
    2
    1. scibot 31 Jul 2024
      RRID:SCR_014966

      DOI: 10.1158/2159-8290.CD-23-0539

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    2. scibot 31 Jul 2024
      RRID:SCR_014966

      DOI: 10.1158/2159-8290.CD-23-0539

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    ncbi.nlm.nih.gov/pmc/articles/PMC11285331/
  18. 52.53.155.43 52.53.155.43
    1-s2.0-S2212877824001212-main-html.html
    1
    1. scibot 16 Jul 2024
      SCR_014966

      DOI: 10.1016/j.molmet.2024.101990

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    52.53.155.43/a88bea44594ac6859240fe779dec92f3f0638e9b/1-s2.0-S2212877824001212-main-html.html
  19. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Multicellular, IVT-derived, unmodified human transcriptome for nanopore-direct RNA analysis
    1
    1. scibot 07 Jul 2024
      RRID:SCR_014966

      DOI: 10.46471/gigabyte.129

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    ncbi.nlm.nih.gov/pmc/articles/PMC11221353/
  20. May 2024
  21. www.cell.com www.cell.com
    Variant-to-function analysis of the childhood obesity chr12q13 locus implicates rs7132908 as a causal variant within the 3′ UTR of FAIM2
    1
    1. scibot 02 May 2024
      RRID:SCR_014966

      DOI: 10.1016/j.xgen.2024.100556

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    cell.com/cell-genomics/fulltext/S2666-979X(24)00122-8
  22. Mar 2024
  23. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    D-2-HG Inhibits IDH1mut Glioma Growth via FTO Inhibition and Resultant m6A Hypermethylation
    1
    1. scibot 27 Mar 2024
      RRID:SCR_014966

      DOI: 10.1158/2767-9764.CRC-23-0271

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    ncbi.nlm.nih.gov/pmc/articles/PMC10959073/
  24. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome-scale requirements for dynein-based transport revealed by a high-content arrayed CRISPR screen
    1
    1. scibot 09 Mar 2024
      RRID:SCR_014966

      DOI: 10.1083/jcb.202306048

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    ncbi.nlm.nih.gov/pmc/articles/PMC10916854/
  25. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    De novo and histologically transformed small cell lung cancer is sensitive to lurbinectedin treatment through the modulation of EMT and NOTCH signaling pathways
    1
    1. scibot 03 Mar 2024
      RRID:SCR_014966

      DOI: 10.1158/1078-0432.CCR-23-0471

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    ncbi.nlm.nih.gov/pmc/articles/PMC10901109/
  26. Feb 2024
  27. aacrjournals.org aacrjournals.org
    p53R245W mutation fuels cancer initiation and metastases in NASH-driven liver tumorigenesis
    1
    1. scibot 27 Feb 2024
      RRID:SCR_014966

      DOI: 10.1158/2767-9764.CRC-23-0218

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    aacrjournals.org/cancerrescommun/article/3/12/2640/732161/p53R245W-Mutation-Fuels-Cancer-Initiation-and
  28. www.biorxiv.org www.biorxiv.org
    A Mutation-driven oncofetal regression fuels phenotypic plasticity in colorectal cancer
    1
    1. scibot 09 Feb 2024
      RRID:SCR_014966

      DOI: 10.1101/2023.12.10.570854

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    biorxiv.org/content/10.1101/2023.12.10.570854v1
  29. www.nature.com www.nature.com
    A clinically applicable connectivity signature for glioblastoma includes the tumor network driver CHI3L1
    1
    1. scibot 08 Feb 2024
      RRID:SCR_014966

      DOI: 10.1038/s41467-024-45067-8

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    nature.com/articles/s41467-024-45067-8
  30. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome-wide p63-target gene analyses reveal TAp63/NRF2-dependent oxidative stress responses
    1
    1. scibot 03 Feb 2024
      RRID:SCR_014966

      DOI: 10.1158/2767-9764.CRC-23-0358

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    ncbi.nlm.nih.gov/pmc/articles/PMC10832605/
  31. Jan 2024
  32. www.nature.com www.nature.com
    A new genomic framework to categorize pediatric acute myeloid leukemia
    1
    1. scibot 18 Jan 2024
      RRID:SCR_014966

      DOI: 10.1038/s41588-023-01640-3

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    nature.com/articles/s41588-023-01640-3
  33. www.sciencedirect.com www.sciencedirect.com
    Integrative analysis of neuroblastoma by single-cell RNA sequencing identifies the NECTIN2-TIGIT axis as a target for immunotherapy
    2
    1. scibot 11 Jan 2024
      RRID:SCR_014966

      DOI: 10.1016/j.ccell.2023.12.008

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    2. scibot 11 Jan 2024
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      DOI: 10.1016/j.ccell.2023.12.008

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    sciencedirect.com/science/article/pii/S1535610823004361
  34. aacrjournals.org aacrjournals.org
    p53R245W mutation fuels cancer initiation and metastases in NASH-driven liver tumorigenesis
    1
    1. scibot 06 Jan 2024
      RRID:SCR_014966

      DOI: 10.1158/2767-9764.CRC-23-0218

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    aacrjournals.org/cancerrescommun/article/3/12/2640/732161/p53R245W-Mutation-Fuels-Cancer-Initiation-and
  35. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Targeting DNA Repair and Survival Signaling in Diffuse Intrinsic Pontine Gliomas to Prevent Tumor Recurrence
    1
    1. scibot 05 Jan 2024
      RRID:SCR_014966

      DOI: 10.1158/1535-7163.MCT-23-0026

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    ncbi.nlm.nih.gov/pmc/articles/PMC10762335/
  36. Nov 2023
  37. dx.doi.org dx.doi.org
    Population-specific Mutation Patterns in Breast Tumors from African American, European American, and Kenyan Patients
    1
    1. scibot 10 Nov 2023
      RRID:SCR_014966

      DOI: 10.1158/2767-9764.CRC-23-0165

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    dx.doi.org/10.1158/2767-9764.CRC-23-0165
  38. www.sciencedirect.com www.sciencedirect.com
    Tissue-specific and tissue-agnostic effects of genome sequence variation modulating blood pressure
    1
    1. scibot 03 Nov 2023
      RRID:SCR_014966

      DOI: 10.1016/j.celrep.2023.113351

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    sciencedirect.com/science/article/pii/S2211124723013633
  39. Oct 2023
  40. www.sciencedirect.com www.sciencedirect.com
    Transcriptomic and proteomic profiling reveals distinct pathogenic features of peripheral non-classical monocytes in systemic lupus erythematosus
    1
    1. scibot 06 Oct 2023
      RRID:SCR_014966

      DOI: 10.1016/j.clim.2023.109765

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    sciencedirect.com/science/article/pii/S1521661623005284
  41. Sep 2023
  42. www.sciencedirect.com www.sciencedirect.com
    Single-cell multi-omics defines the cell-type-specific impact of splicing aberrations in human hematopoietic clonal outgrowths
    1
    1. scibot 29 Sep 2023
      RRID:SCR_014966

      DOI: 10.1016/j.stem.2023.07.012

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    sciencedirect.com/science/article/pii/S1934590923002576
  43. Aug 2023
  44. www.biorxiv.org www.biorxiv.org
    Variant-to-function analysis of the childhood obesity chr12q13 locus implicates rs7132908 as a causal variant within the 3’ UTR of FAIM2
    1
    1. scibot 27 Aug 2023
      RRID:SCR_014966

      DOI: 10.1101/2023.08.21.553157

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    biorxiv.org/content/10.1101/2023.08.21.553157v1
  45. Jul 2023
  46. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A network-based approach reveals long non-coding RNAs associated with disease activity in lupus nephritis: key pathways for flare and potential biomarkers to be used as liquid biopsies
    1
    1. scibot 21 Jul 2023
      SCR_014966

      DOI: 10.3389/fimmu.2023.1203848

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    ncbi.nlm.nih.gov/pmc/articles/PMC10355154/
  47. Jun 2023
  48. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    DAB2IP Is a Bifunctional Tumor Suppressor That Regulates Wild-Type RAS and Inflammatory Cascades in KRAS Mutant Colon Cancer
    1
    1. scibot 07 Jun 2023
      RRID:SCR_014966

      DOI: 10.1158/0008-5472.CAN-22-0370

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    ncbi.nlm.nih.gov/pmc/articles/PMC10236151/
  49. May 2023
  50. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Adipose tissue plasticity in pheochromocytoma patients suggests a role of the splicing machinery in human adipose browning
    1
    1. scibot 27 May 2023
      RRID:SCR_01496

      DOI: 10.1016/j.isci.2023.106847

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    ncbi.nlm.nih.gov/pmc/articles/PMC10209542/
  51. Mar 2023
  52. www.sciencedirect.com www.sciencedirect.com
    Nicotinamide riboside supplementation is not associated with altered methylation homeostasis in Parkinson’s disease
    1
    1. scibot 11 Mar 2023
      RRID:SCR_014966

      DOI: 10.1016/j.isci.2023.106278

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    sciencedirect.com/science/article/pii/S2589004223003553
  53. Jan 2023
  54. www.sciencedirect.com www.sciencedirect.com
    Enrichment of oral-derived bacteria in inflamed colorectal tumors and distinct associations of Fusobacterium in the mesenchymal subtype
    1
    1. scibot 27 Jan 2023
      RRID:SCR_014966

      DOI: 10.1016/j.xcrm.2023.100920

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    sciencedirect.com/science/article/pii/S2666379123000058
  55. Dec 2022
  56. www.mdpi.com www.mdpi.com
    Pancreatic Islet Cells Response to IFNγ Relies on Their Spatial Location within an Islet
    1
    1. scibot 31 Dec 2022
      RRID:SCR_014966

      DOI: 10.3390/cells12010113

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    mdpi.com/2073-4409/12/1/113
  57. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Anti-cancer activity of ST101, a novel antagonist of CCAAT/enhancer binding protein β
    1
    1. scibot 16 Dec 2022
      RRID:SCR_014966

      DOI: 10.1158/1535-7163.MCT-21-0962

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    ncbi.nlm.nih.gov/pmc/articles/PMC9630826/
  58. 52.53.155.43 52.53.155.43
    ccr-22-1665-html.html
    1
    1. scibot 02 Dec 2022
      RRID:SCR_014966

      DOI: 10.1158/1078-0432.ccr-22-1665

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    52.53.155.43/515d4d4023662e50c93811fcbe9244577bb21db8/ccr-22-1665-html.html
  59. Oct 2022
  60. 52.53.155.43 52.53.155.43
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    Human WDR5 promotes breast cancer growth and metastasis via KMT2-independent translation regulation
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  62. Sep 2022
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    Intracellular cholesterol pools regulate oncogenic signaling and epigenetic circuitries in Early T-cell Precursor Acute Lymphoblastic Leukemia
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    Integrative RNA-omics discovers GNAS alternative splicing as a phenotypic driver of splicing factor-mutant neoplasms
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  65. Jun 2022
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    Comprehensive surfaceome profiling to identify and validate novel cell-surface targets in osteosarcoma
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    Ptpn1 deletion protects oval cells against lipoapoptosis by favoring lipid droplet formation and dynamics
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  69. May 2022
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    Differential gain-of-function activity of three p53 hotspot mutants in vivo
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    An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types
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  73. Apr 2022
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    The need to reassess single-cell RNA sequencing datasets: the importance of biological sample processing
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    CIC-mediated modulation of MAPK signaling opposes receptor tyrosine kinase inhibitor response in kinase-addicted sarcoma
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  76. Dec 2021
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    Deconvolution of Bulk Gene Expression Profiles with Single-Cell Transcriptomics to Develop a Cell Type Composition-Based Prognostic Model for Acute Myeloid Leukemia
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  78. Nov 2021
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    Multi-tumor analysis of cancer-stroma interactomes of patient-derived xenografts unveils the unique homeostatic process in renal cell carcinomas
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  80. Oct 2021
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    An atlas of gene regulatory elements in adult mouse cerebrum
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    TPRG1-AS1 induces RBM24 expression and inhibits liver cancer progression by sponging miR-4691-5p and miR-3659
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    A Role for Translational Regulation by S6 Kinase and a Downstream Target in Inflammatory Pain
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    Comparative cellular analysis of motor cortex in human, marmoset and mouse
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    A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex
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  86. Sep 2021
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    Transcriptional control of brain tumor stem cells by a carbohydrate binding protein
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  88. Aug 2021
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    F1000Research Article: The need to reassess single-cell RNA sequencing datasets: more is not always better.
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  93. Jul 2021
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    Profiling of RNAs from Human Islet-Derived Exosomes in a Model of Type 1 Diabetes
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    Maternal cecal microbiota transfer rescues early-life antibiotic-induced enhancement of type 1 diabetes in mice
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  96. Jun 2021
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    Novel role of ASH1L histone methyltransferase in anaplastic thyroid carcinoma
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  98. Mar 2021
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    Serial transplantation unmasks galectin-9 contribution to tumor immune escape in the MB49 murine model
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    Germline EGFR variants are over-represented in adolescents and young adults (AYA) with adrenocortical carcinoma
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  102. Feb 2021
  103. www.biorxiv.org www.biorxiv.org
    An Atlas of Gene Regulatory Elements in Adult Mouse Cerebrum
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  104. Oct 2020
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    Purification of pancreatic endocrine subsets reveals increased iron metabolism in beta-cells
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  106. Sep 2020
  107. elifesciences.org elifesciences.org
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    Chromosome-level de novo assembly of the pig-tailed macaque genome using linked-read sequencing and HiC proximity scaffolding
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    Genetic Variation in Type 1 Diabetes Reconfigures the 3D Chromatin Organization of T Cells and Alters Gene Expression
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  110. Jan 2020
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    Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks
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    Active and Repressed Chromatin Domains Exhibit Distinct Nucleosome Segregation during DNA Replication
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  114. Nov 2018
  115. www.sciencedirect.com www.sciencedirect.com
    LC3-Associated Phagocytosis in Myeloid Cells Promotes Tumor Immune Tolerance
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  117. www.jneurosci.org www.jneurosci.org
    Palladin Is a Neuron-Specific Translational Target of mTOR Signaling That Regulates Axon Morphogenesis
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      RRID:SCR_014966

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  118. www.sciencedirect.com www.sciencedirect.com
    Lineage-Determining Transcription Factor TCF-1 Initiates the Epigenetic Identity of T Cells
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    sciencedirect.com/science/article/pii/S1074761318300335
  119. www.cell.com www.cell.com
    The Immune Landscape of Cancer
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    1. scibot 05 Nov 2018
      RRID:SCR_014966

      Curator: @evieth

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    cell.com/immunity/references/S1074-7613(18)30121-3
  120. www.sciencedirect.com www.sciencedirect.com
    The Dynamic Landscape of Open Chromatin during Human Cortical Neurogenesis
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    1. scibot 05 Nov 2018
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  121. Nov 2017
  122. www.sciencedirect.com www.sciencedirect.com
    Fast, Quantitative and Variant Enabled Mapping of Peptides to Genomes
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    1. scibot 08 Nov 2017
      RRID:SCR_014966

      Curator: @Jmenke

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    sciencedirect.com/science/article/pii/S2405471217303332
  123. www.sciencedirect.com www.sciencedirect.com
    Nucleus-Translocated ACSS2 Promotes Gene Transcription for Lysosomal Biogenesis and Autophagy
    1
    1. scibot 08 Nov 2017
      GENCODE19

      Curator: @Zeljana_Babic

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