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Human papillomavirus integration induces oncogenic host gene fusions in oropharyngeal cancers

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1. scibot 10 Sep 2025
  
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  DOI: 10.1158/2159-8290.CD-24-1535
  
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aacrjournals.org/cancerdiscovery/article/15/9/1927/764362/Human-Papillomavirus-Integration-Induces-Oncogenic
Aug 2025
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2025.07.26.666977v1.full-html.html

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1. scibot 05 Aug 2025
  
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  DOI: 10.1101/2025.07.26.666977
  
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52.53.155.43/523aba7c04d08b4157ea984183976bbd000aa86d/2025.07.26.666977v1.full-html.html
Jul 2025
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Nitrogen metabolism profiling reveals cell state-specific pyrimidine synthesis pathway choice

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1. scibot 30 Jul 2025
  
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  DOI: 10.1101/2025.07.23.666448
  
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biorxiv.org/content/10.1101/2025.07.23.666448v1
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RUNX2 inhibition disrupts a PAX3::FOXO1-RUNX2 feed-forward loop and dismantles oncogenic gene programs in fusion-positive rhabdomyosarcoma

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1. scibot 30 Jul 2025
  
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  DOI: 10.1101/2025.07.21.665972
  
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biorxiv.org/content/10.1101/2025.07.21.665972v1
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preprints202506.1512.v1-html.html

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1. scibot 12 Jul 2025
  
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  DOI: 10.20944/preprints202506.1512.v1
  
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52.53.155.43/63aae321c6ca4d77185fdae3d055045141be5a7a/preprints202506.1512.v1-html.html
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MLKL activates the cGAS-STING pathway by releasing mitochondrial DNA upon necroptosis induction

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1. scibot 03 Jul 2025
  
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  DOI: 10.1016/j.molcel.2025.06.005
  
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sciencedirect.com/science/article/pii/S1097276525005052
Jun 2025
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Functional assessment of all ATM SNVs using prime editing and deep learning

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1. scibot 28 Jun 2025
  
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  DOI: 10.1016/j.cell.2025.05.046
  
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sciencedirect.com/science/article/pii/S0092867425006348
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Prolonged but finite antigen presentation promotes reversible defects of “helpless” memory CD8+ T cells

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1. scibot 26 Jun 2025
  
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  DOI: 10.1016/j.immuni.2025.05.025
  
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sciencedirect.com/science/article/pii/S1074761325002468
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PDZ-directed substrate recruitment is the primary determinant of specific 4E-BP1 dephosphorylation by PP1-Neurabin

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1. scibot 25 Jun 2025
  
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  DOI: 10.7554/eLife.103403
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12185105/
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Rice stripe virus NS3 uses the host signaling pathways to control pathogenicity

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1. scibot 03 Jun 2025
  
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  DOI: 10.1016/j.devcel.2025.04.023
  
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sciencedirect.com/science/article/pii/S1534580725002618
May 2025
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P4HB, a novel succinated protein, is essential for fumarate-induced cancer metastasis

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1. scibot 17 May 2025
  
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  DOI: 10.1016/j.ijbiomac.2025.143885
  
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sciencedirect.com/science/article/pii/S014181302504437X
Apr 2025
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Germline variants in patients from the Iranian hereditary colorectal cancer registry

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1. scibot 16 Apr 2025
  
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  DOI: 10.1186/s12935-025-03773-3
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11995590/
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Skin mycobiota-mediated antagonism against Staphylococcus aureus through a modified fatty acid

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1. scibot 15 Apr 2025
  
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  DOI: 10.1016/j.cub.2025.03.055
  
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sciencedirect.com/science/article/pii/S0960982225003719
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A Systemic Immunoinformatics Approach to Design Combinatorial Multiepitope Vaccine Candidates against Vector-borne Bacterial Infections Exploiting the Proteomes of the Causative Agent and Vector for Scrub typhus

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1. scibot 03 Apr 2025
  
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  DOI: 10.1016/j.microb.2025.100324
  
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sciencedirect.com/science/article/pii/S2950194625000925
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Genetically encoded reporters of actin filament organization in living cells and tissues

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1. scibot 03 Apr 2025
  
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  DOI: 10.1016/j.cell.2025.03.003
  
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sciencedirect.com/science/article/pii/S0092867425002764
Mar 2025
52.53.155.43 52.53.155.43

PDF-html.html

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1. scibot 23 Mar 2025
  
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  DOI: 10.1101/2025.03.19.643339
  
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52.53.155.43/62d1ab468ae2105585e292a77643013ab01db943/PDF-html.html
Jan 2025
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Cytoplasmic mRNA decay controlling inflammatory gene expression is determined by pre-mRNA fate decision

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1. scibot 28 Jan 2025
  
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  DOI: 10.1016/j.molcel.2025.01.001
  
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sciencedirect.com/science/article/pii/S1097276525000012
febs.onlinelibrary.wiley.com febs.onlinelibrary.wiley.com

CRISPR targeting of FOXL2 c.402C>G mutation reduces malignant phenotype in granulosa tumor cells and identifies anti-tumoral compounds

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1. scibot 11 Jan 2025
  
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  DOI: 10.1002/1878-0261.13799
  
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febs.onlinelibrary.wiley.com/doi/10.1002/1878-0261.13799
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Plural molecular and cellular mechanisms of pore domain KCNQ2 encephalopathy

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1. scibot 08 Jan 2025
  
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  DOI: 10.7554/eLife.91204
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11703504/
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Compartmentalized localization of perinuclear proteins within germ granules in C. elegans

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1. scibot 03 Jan 2025
  
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  DOI: 10.1016/j.devcel.2024.12.016
  
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sciencedirect.com/science/article/pii/S153458072400738X
Dec 2024
www.cell.com www.cell.com

Disrupted methionine cycle triggers muscle atrophy in cancer cachexia through epigenetic regulation of REDD1

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1. scibot 29 Dec 2024
  
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  DOI: 10.1016/j.cmet.2024.10.017
  
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cell.com/cell-metabolism/fulltext/S1550-4131(24)00413-3
52.53.155.43 52.53.155.43

1-s2.0-S2589004224028979-main-html.html

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1. scibot 24 Dec 2024
  
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  DOI: 10.1016/j.isci.2024.111670
  
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52.53.155.43/11ad092548aafa4bc20cfff012b010986c829798/1-s2.0-S2589004224028979-main-html.html
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Mutability and hypermutation antagonize immunoglobulin codon optimality

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1. scibot 21 Dec 2024
  
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  DOI: 10.1016/j.molcel.2024.11.033
  
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sciencedirect.com/science/article/pii/S1097276524009882
Nov 2024
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A tug-of-war between germ cell motility and intercellular bridges controls germline cyst formation in mice

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1. scibot 24 Nov 2024
  
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  DOI: 10.1016/j.cub.2024.10.062
  
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Evidence for an interaction of paracingulin with microtubules

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1. scibot 07 Nov 2024
  
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  DOI: 10.17912/micropub.biology.001341
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11513637/
Sep 2024
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Antibacterial action, proteolytic immunity, and in vivo activity of a Vibrio cholerae microcin

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1. scibot 11 Sep 2024
  
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  DOI: 10.1016/j.chom.2024.08.012
  
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sciencedirect.com/science/article/pii/S1931312824003196
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Targeting EGLN2/PHD1 protects motor neurons and normalizes the astrocytic interferon response

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1. scibot 10 Sep 2024
  
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  DOI: 10.1016/j.celrep.2024.114719
  
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sciencedirect.com/science/article/pii/S2211124724010702
Jul 2024
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The chemokine Cxcl14 regulates interneuron differentiation in layer I of the somatosensory cortex

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1. scibot 30 Jul 2024
  
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  DOI: 10.1016/j.celrep.2024.114531
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11373301/
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Biogenesis of lysosome-related organelles complex-2 is an evolutionarily ancient proto-coatomer complex

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1. scibot 27 Jul 2024
  
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  DOI: 10.1016/j.cub.2024.06.081
  
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sciencedirect.com/science/article/pii/S0960982224008996
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Group A streptococcus isolated in Guyana with reduced susceptibility to β-lactam antibiotics

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1. scibot 25 Jul 2024
  
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  DOI: 10.1099/acmi.0.000746.v3
  
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ncbi.nlm.nih.gov/pmc/articles/PMC11261736/
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Analyzing embryo dormancy at single-cell resolution reveals dynamic transcriptional responses and activation of integrin-Yap/Taz prosurvival signaling

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1. scibot 25 Jul 2024
  
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  DOI: 10.1016/j.stem.2024.06.015
  
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sciencedirect.com/science/article/pii/S1934590924002509
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Transfection of Babesia duncani: A Genetic Toolbox of this Pathogen to Advance Babesia Biology

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1. scibot 02 Jul 2024
  
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  DOI: 10.21769/BioProtoc.5016
  
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ncbi.nlm.nih.gov/pmc/articles/PMC11211078/
May 2024
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Insights from multi-omic modeling of neurodegeneration in xeroderma pigmentosum using an induced pluripotent stem cell system

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1. scibot 30 May 2024
  
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  DOI: 10.1016/j.celrep.2024.114243
  
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sciencedirect.com/science/article/pii/S2211124724005710
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Cell Competition Eliminates Aneuploid Human Pluripotent Stem Cells

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1. scibot 30 May 2024
  
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  DOI: 10.1101/2024.05.08.593217
  
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2. scibot 30 May 2024
  
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  DOI: 10.1101/2024.05.08.593217
  
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ncbi.nlm.nih.gov/pmc/articles/PMC11100710/
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Multi-repeat sequences identification using genome mining techniques for developing highly sensitive molecular diagnostic assay for the detection of Chlamydia trachomatis

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1. scibot 24 May 2024
  
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  DOI: 10.12688/openresafrica.14316.2
  
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The C-terminal disordered loop domain of Apc8 unlocks APC/C mitotic activation

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Interactions between pili affect the outcome of bacterial competition driven by the type VI secretion system

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Antigen-level resolution of commensal-specific B cell responses can be enabled by phage display screening coupled with B cell tetramers

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The SV40 virus enhancer functions as a somatic hypermutation-targeting element with potential oncogenic activity

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Variant-to-function analysis of the childhood obesity chr12q13 locus implicates rs7132908 as a causal variant within the 3′ UTR of FAIM2

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Long-term expandable mouse and human-induced nephron progenitor cells enable kidney organoid maturation and modeling of plasticity and disease

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ZP2 cleavage blocks polyspermy by modulating the architecture of the egg coat

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A simple method for rapid cloning of complete herpesvirus genomes

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Generation of immunocompetent somatic glioblastoma mouse models through in situ transformation of subventricular zone neural stem cells

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PNMA2 forms immunogenic non-enveloped virus-like capsids associated with paraneoplastic neurological syndrome

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Multi-repeat sequences identification using genome mining ...

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A GFP-expressing minigenome of a chrysovirus replicating in fungi

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Pirin Inhibits FAS-Mediated Apoptosis to Support Colorectal Cancer Survival

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A virus from Aspergillus cibarius with features of alpha- and betachrysoviruses

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Optogenetic manipulation of BMP signaling to drive chondrogenic differentiation of hPSCs

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RNF14-dependent atypical ubiquitylation promotes translation-coupled resolution of RNA-protein crosslinks

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Chimeric autoantibody receptor T cells deplete NMDA receptor-specific B cells

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Unedited allogeneic iNKT cells show extended persistence in MHC-mismatched canine recipients

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An expanded CRISPR–Cas9-assisted recombineering toolkit for engineering genetically intractable Pseudomonas aeruginosa isolates

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Direct recruitment of Mis18 to interphase spindle pole bodies promotes CENP-A chromatin assembly

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MARCH7-mediated ubiquitination decreases the solubility of ATG14 to inhibit autophagy

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Variant-to-function analysis of the childhood obesity chr12q13 locus implicates rs7132908 as a causal variant within the 3’ UTR of FAIM2

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An unconventional TOG domain is required for CLASP localization

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Paracingulin recruits CAMSAP3 to tight junctions and regulates microtubule and polarized epithelial organization

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Jun 2023
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PARK15/FBXO7 is dispensable for PINK1/Parkin mitophagy in iNeurons and HeLa cell systems

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Intermediate filament network perturbation in the C. elegans intestine causes systemic dysfunctions

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May 2023
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AKT activation because of PTEN loss upregulates xCT via GSK3β/NRF2, leading to inhibition of ferroptosis in PTEN-mutant tumor cells

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The RhoA-ROCK1/ROCK2 Pathway Exacerbates Inflammatory Signaling in Immortalized and Primary Microglia

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Directed differentiation of human iPSCs into mesenchymal lineages by optogenetic control of TGF-β signaling

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A conditional strategy for cell-type-specific labeling of endogenous excitatory synapses in Drosophila

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Glioblastoma cell fate is differentially regulated by the microenvironments of the tumor bulk and infiltrative margin

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Ubx5-Cdc48 assists the protease Wss1 at DNA-protein crosslink sites in yeast

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Mar 2023
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Oncogenic Merkel Cell Polyomavirus T Antigen Truncating Mutations are Mediated by APOBEC3 Activity in Merkel Cell Carcinoma

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Leaked genomic and mitochondrial DNA contribute to the host response to noroviruses in a STING-dependent manner

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High-efficiency pharmacogenetic ablation of oligodendrocyte progenitor cells in the adult mouse CNS

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Detecting RNA-protein proximity at DNA double-strand breaks using combined fluorescence in situ hybridization with proximity ligation assay

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The calcium-sensing receptor (CaSR) regulates zebrafish sensorimotor decision making via a genetically defined cluster of hindbrain neurons

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Unmyelinated sensory neurons use Neuregulin signals to promote myelination of interneurons in the CNS

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Rap1 controls epiblast morphogenesis in sync with the pluripotency states transition

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Establishment of centromere identity is dependent on nuclear spatial organization

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Active APPL1 sequestration by Plasmodium favors liver-stage development

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A naturally DNase-free CRISPR-Cas12c enzyme silences gene expression

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γ-secretase promotes Drosophila postsynaptic development through the cleavage of a Wnt receptor

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A versatile viral toolkit for functional discovery in the nervous system

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Brucella activates the host RIDD pathway to subvert BLOS1-directed immune defense

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An optimized 4C-seq protocol based on cistrome and epigenome data in the mouse RAW264.7 macrophage cell line

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Applying Exercise-mimetic Engineered Skeletal Muscle Model to Interrogate the Adaptive Response of Irisin to Mechanical Force

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Tumor-resident intracellular microbiota promotes metastatic colonization in breast cancer

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Force-generating apoptotic cells orchestrate avian neural tube bending

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Respiratory mucosal delivery of next-generation COVID-19 vaccine provides robust protection against both ancestral and variant strains of SARS-CoV-2

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SUMO orchestrates multiple alternative DNA-protein crosslink repair pathways

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F1000Research Article: Methods to measure calcitonin receptor activity, up-regulated in cell stress, apoptosis and autophagy.

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Optimized incorporation of an unnatural fluorescent amino acid affords measurement of conformational dynamics governing high-fidelity DNA replication

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Untitled document

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Structural basis for recruitment of the CHK1 DNA damage kinase by the CLASPIN scaffold protein

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Toxoplasma gondii secreted effectors co-opt host repressor complexes to inhibit necroptosis

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Phylogeny and abiotic conditions shape the diel floral emission patterns of desert Brassicaceae species

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BBLN-1 is essential for intermediate filament organization and apical membrane morphology

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Fine Mapping of Leaf Trichome Density Revealed a 747-kb Region on Chromosome 1 in Cold-Hardy Hybrid Wine Grape Populations

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Dyshomeostatic modulation of Ca2+-activated K+ channels in a human neuronal model of KCNQ2 encephalopathy

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Magnesium efflux from Drosophila Kenyon cells is critical for normal and diet-enhanced long-term memory

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Identification of SARS-CoV-2 spike mutations that attenuate monoclonal and serum antibody neutralization

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Cross-compartment signal propagation in the mitotic exit network

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CRISPR/Cas12a-Mediated Gene Editing in Geodia barretti Sponge Cell Culture

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Multiple Alternative Promoters and Alternative Splicing Enable Universal Transcription-Based Logic Computation in Mammalian Cells

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16p11.2 microdeletion imparts transcriptional alterations in human iPSC-derived models of early neural development

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Telomerase biogenesis requires a novel Mex67 function and a cytoplasmic association with the Sm7 complex

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Novel C1q receptor-mediated signaling controls neural stem cell behavior and neurorepair

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  RRID:SCR_015052
  
  DOI: 10.7554/eLife.55732
  
  Resource: SnapGene (RRID:SCR_015052)
  
  Curator: @evieth
  
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ncbi.nlm.nih.gov/pmc/articles/PMC7476762/
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Discovery of O-Linked Carbohydrate on HIV-1 Envelope and Its Role in Shielding against One Category of Broadly Neutralizing Antibodies

1
1. scibot 26 Sep 2020
  
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  RRID:SCR_015052
  
  DOI: 10.1016/j.celrep.2020.01.056
  
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sciencedirect.com/science/article/pii/S2211124720300814
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A microscopy-based kinetic analysis of yeast vacuolar protein sorting

1
1. scibot 25 Sep 2020
  
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  RRID:SCR_015052
  
  DOI: 10.7554/eLife.56844
  
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ncbi.nlm.nih.gov/pmc/articles/PMC7338053/
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c-Src Promotes Tumorigenesis and Tumor Progression by Activating PFKFB3

1
1. scibot 23 Sep 2020
  
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  RRID:SCR_015052
  
  DOI: 10.1016/j.celrep.2020.03.005
  
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sciencedirect.com/science/article/pii/S221112472030303X
elifesciences.org elifesciences.org

Feedback regulation of cytoneme-mediated transport shapes a tissue-specific FGF morphogen gradient

1
1. scibot 16 Sep 2020
  
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  RRID:SCR_015052
  
  DOI: 10.7554/eLife.38137
  
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elifesciences.org/articles/38137
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An alternatively spliced, non-signaling insulin receptor modulates insulin sensitivity via insulin peptide sequestration in C. elegans

1
1. scibot 14 Sep 2020
  
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  RRID:SCR_015052
  
  DOI: 10.7554/eLife.49917
  
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ncbi.nlm.nih.gov/pmc/articles/PMC7041946/
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CRISPR–Cas9, CRISPRi and CRISPR-BEST-mediated genetic manipulation in streptomycetes

1
1. scibot 11 Sep 2020
  
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  RRID:SCR_015052
  
  DOI: 10.1038/s41596-020-0339-z
  
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nature.com/articles/s41596-020-0339-z
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The role of Rif1 in telomere length regulation is separable from its role in origin firing

1
1. scibot 03 Sep 2020
  
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  RRID:SCR_015052
  
  DOI: 10.7554/eLife.58066
  
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ncbi.nlm.nih.gov/pmc/articles/PMC7371424/
Jan 2020
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The Aspartic Protease Ddi1 Contributes to DNA-Protein Crosslink Repair in Yeast

1
1. scibot 13 Jan 2020
  
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  RRID:SCR_015052
  
  DOI: 10.1016/j.molcel.2019.12.007
  
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sciencedirect.com/science/article/pii/S1097276519308986
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Phosphorylation-mediated interactions with TOPBP1 couple 53BP1 and 9-1-1 to control the G1 DNA damage checkpoint

1
1. scibot 13 Jan 2020
  
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  RRID:SCR_015052
  
  DOI: 10.7554/eLife.44353
  
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ncbi.nlm.nih.gov/pmc/articles/PMC6561707/
pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov

Phage integration alters the respiratory strategy of its host

1
1. scibot 13 Jan 2020
  
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  RRID:SCR_015052
  
  DOI: 10.7554/eLife.49081
  
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pubmed.ncbi.nlm.nih.gov/31650957/
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A Bacterial Expression Platform for Production of Therapeutic Proteins Containing Human-like O-Linked Glycans

1
1. scibot 13 Jan 2020
  
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  RRID:SCR_015052
  
  DOI: 10.1016/j.chembiol.2018.10.017
  
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  Curator: @Jmenke
  
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sciencedirect.com/science/article/pii/S2451945618303775
Nov 2018
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SIRT1 Activation Disrupts Maintenance of Myelodysplastic Syndrome Stem and Progenitor Cells by Restoring TET2 Function

1
1. scibot 05 Nov 2018
  
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  SnapGene
  
  Curator: @Jmenke
  
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sciencedirect.com/science/article/pii/S1934590918303850
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Developmental Coordination during Olfactory Circuit Remodeling in Drosophila

1
1. scibot 05 Nov 2018
  
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sciencedirect.com/science/article/pii/S0896627318306482
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The Energy-Coupling Factor Transporter Module EcfAA’T, a Novel Candidate for the Genetic Basis of Fatty Acid-Auxotrophic Small-Colony Variants of Staphylococcus aureus

1
1. scibot 05 Nov 2018
  
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ncbi.nlm.nih.gov/pmc/articles/PMC6102330/
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Biallelic Mutations in MYORG Cause Autosomal Recessive Primary Familial Brain Calcification

1
1. scibot 05 Nov 2018
  
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  SnapGene
  
  Curator: @Jmenke
  
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  (SnapGene, RRID:SCR_015052)
  
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elifesciences.org elifesciences.org

CRISPR/Cas9 and Active Genetics-based trans-species replacement of the endogenous Drosophila kni-L2 CRM reveals unexpected complexity

1
1. scibot 05 Nov 2018
  
  in Public
  
  RRID:SCR_015052
  
  Curator: @evieth
  
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elifesciences.org/articles/30281

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