113 Matching Annotations
  1. Last 7 days
  2. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Functional genomics reveals key gene families and molecular pathways for extreme cold survival in the khapra beetle
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    pmc.ncbi.nlm.nih.gov/articles/PMC13032687/
  3. Mar 2026
  4. www.sciencedirect.com www.sciencedirect.com
    Stepwise evolutionary transitions in Cladophorales plastid genomes reveal origins of hairpin chromosomes
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    sciencedirect.com/science/article/pii/S0960982226002253
  5. www.biorxiv.org www.biorxiv.org
    First draft genome of the decaploid species, Ludwigia grandiflora subsp. hexapetala, validated through gene expression
    1
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    biorxiv.org/content/10.64898/2026.03.09.710498v1
  6. Feb 2026
  7. 54.241.53.176 54.241.53.176
    1-s2.0-S2589004226004207-main-html.html
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    54.241.53.176/ad05980a773f1e695ab7862f56b8e4bb340a3857/1-s2.0-S2589004226004207-main-html.html
  8. Aug 2025
  9. www.science.org www.science.org
    The Australian dingo is an early offshoot of modern breed dogs
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    science.org/doi/10.1126/sciadv.abm5944
  10. Apr 2025
  11. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The molecular basis of octocoral calcification revealed by genome and skeletal proteome analyses
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    pmc.ncbi.nlm.nih.gov/articles/PMC11959691/
  12. Mar 2025
  13. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Long-read metagenomic sequencing negates inferred loss of cytosine methylation in Myxosporea (Cnidaria: Myxozoa)
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    pmc.ncbi.nlm.nih.gov/articles/PMC11905887/
  14. Feb 2025
  15. www.sciencedirect.com www.sciencedirect.com
    The endogenous antigen-specific CD8+ T cell repertoire is composed of unbiased and biased clonotypes with differential fate commitments
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    sciencedirect.com/science/article/pii/S1074761325000688
  16. Jan 2025
  17. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Diaci v3.0: chromosome-level assembly, de novo transcriptome, and manual annotation of Diaphorina citri, insect vector of Huanglongbing
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11659978/
  18. Sep 2024
  19. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Whole-genome sequencing of the invasive golden apple snail Pomacea canaliculata from Asia reveals rapid expansion and adaptive evolution
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    ncbi.nlm.nih.gov/pmc/articles/PMC11417965/
  20. Jul 2024
  21. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Innovative approach for high-throughput exploiting sex-specific markers in Japanese parrotfish Oplegnathus fasciatus
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    ncbi.nlm.nih.gov/pmc/articles/PMC11258905/
  22. May 2024
  23. www.sciencedirect.com www.sciencedirect.com
    Reciprocal conversion between annual and polycarpic perennial flowering behavior in the Brassicaceae
    3
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    sciencedirect.com/science/article/pii/S0092867424004732
  24. Feb 2024
  25. www.sciencedirect.com www.sciencedirect.com
    CAG repeat expansions create splicing acceptor sites and produce aberrant repeat-containing RNAs
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    sciencedirect.com/science/article/pii/S1097276524000078
  26. Dec 2023
  27. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Stenotrophomonas goyi sp. nov., a novel bacterium associated with the alga Chlamydomonas reinhardtii
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10682605/
  28. Nov 2023
  29. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Evaluating long-read de novo assembly tools for eukaryotic genomes: insights and considerations
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    ncbi.nlm.nih.gov/pmc/articles/PMC10673639/
  30. Oct 2023
  31. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The chromosome-level genome of Chinese praying mantis Tenodera sinensis (Mantodea: Mantidae) reveals its biology as a predator
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10600911/
  32. www.cell.com www.cell.com
    An integrated systems-biology approach reveals differences in formate metabolism in the genus Methanothermobacter
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    cell.com/iscience/abstract/S2589-0042(23)02093-X
  33. Sep 2023
  34. www.sciencedirect.com www.sciencedirect.com
    Distinct pathways of adaptive evolution in Cryptococcus neoformans reveal a mutation in adenylyl cyclase with trade-offs for pathogenicity
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    sciencedirect.com/science/article/pii/S096098222301134X
  35. Aug 2023
  36. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Haplogenome assembly reveals structural variation in Eucalyptus interspecific hybrids
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    ncbi.nlm.nih.gov/pmc/articles/PMC10460159/
  37. Jul 2023
  38. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic analyses provide insights into the evolution and salinity adaptation of halophyte Tamarix chinensis
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10370455/
  39. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A new haplotype-resolved turkey genome to enable turkey genetics and genomics research
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10360393/
  40. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The Australasian dingo archetype: de novo chromosome-length genome assembly, DNA methylome, and cranial morphology
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10353722/
  41. Apr 2023
  42. academic.oup.com academic.oup.com
    GEN-ERA toolbox: unified and reproducible workflows for research in microbial genomics
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad022/7111624
  43. Mar 2023
  44. academic.oup.com academic.oup.com
    Resequencing of a Pekin duck breeding population provides insights into the genomic response to short-term artificial selection
    2
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad016/7086661
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the roundjaw bonefish (Albula glossodonta), a vulnerable circumtropical sportfish
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10038134/
  46. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A highly contiguous, scaffold-level nuclear genome assembly for the fever tree (Cinchona pubescens Vahl) as a novel resource for Rubiaceae research
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10027117/
  47. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    SMARTdenovo: a de novo assembler using long noisy reads
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    ncbi.nlm.nih.gov/pmc/articles/PMC9632051/
  48. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Improvements in the sequencing and assembly of plant genomes
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    ncbi.nlm.nih.gov/pmc/articles/PMC9631998/
  49. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level assembly of the common vetch (Vicia sativa) reference genome
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650280/
  50. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality draft genome for Melaleuca alternifolia (tea tree): a new platform for evolutionary genomics of myrtaceous terpene-rich species
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650293/
  51. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Optimizing experimental design for genome sequencing and assembly with Oxford Nanopore Technologies
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650304/
  52. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genome of a giant (trevally): Caranx ignobilis
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    ncbi.nlm.nih.gov/pmc/articles/PMC9694125/
  53. Feb 2023
  54. www.biorxiv.org www.biorxiv.org
    The Australasian dingo archetype: De novo chromosome-length genome assembly, DNA methylome, and cranial morphology
    1
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    biorxiv.org/content/10.1101/2023.01.26.525801v1
  55. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of goose provides insight into the adaptation and growth of local goose breeds
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad003/7025323
  56. www.mdpi.com www.mdpi.com
    Genome Assembly and Comparative Analysis of the Egg Parasitoid Wasp Trichogramma dendrolimi Shed Light on the Composition and Evolution of Olfactory Receptors and Venoms
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    mdpi.com/2075-4450/14/2/144
  57. Jan 2023
  58. www.nature.com www.nature.com
    A chromosome-level genome assembly of Plantago ovata
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    nature.com/articles/s41598-022-25078-5
  59. Dec 2022
  60. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Near-chromosomal de novo assembly of Bengal tiger genome reveals genetic hallmarks of apex predation
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    ncbi.nlm.nih.gov/pmc/articles/PMC9795480/
  61. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A Chromosome-level assembly of the Japanese eel genome, insights into gene duplication and chromosomal reorganization
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    ncbi.nlm.nih.gov/pmc/articles/PMC9730501/
  62. Nov 2022
  63. academic.oup.com academic.oup.com
    High-quality genome assembles from key Hawaiian coral species
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac098/6815755
  64. Oct 2022
  65. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly for the Aldabra giant tortoise enables insights into the genetic health of a threatened population
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9553416/
  66. Jul 2022
  67. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level genome of the booklouse, Liposcelis brunnea, provides insight into louse evolution and environmental stress adaptation
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9295366/
  68. Jun 2022
  69. www.nature.com www.nature.com
    The first long-read nuclear genome assembly of Oryza australiensis, a wild rice from northern Australia
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    nature.com/articles/s41598-022-14893-5
  70. academic.oup.com academic.oup.com
    A chromosome-level genome assembly of Artocarpus nanchuanensis (Moraceae), an extremely endangered fruit tree
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac042/6608506
  71. May 2022
  72. f1000research.com f1000research.com
    F1000Research Article: The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms.
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    f1000research.com/articles/11-530
  73. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The Australian dingo is an early offshoot of modern breed dogs
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    ncbi.nlm.nih.gov/pmc/articles/PMC9032958/
  74. Apr 2022
  75. www.science.org www.science.org
    The Australian dingo is an early offshoot of modern breed dogs
    1
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    science.org/doi/10.1126/sciadv.abm5944
  76. www.sciencedirect.com www.sciencedirect.com
    A chromosome-level genome of the human blood fluke Schistosoma japonicum identifies the genomic basis of host-switching
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    sciencedirect.com/science/article/pii/S2211124722003904
  77. Mar 2022
  78. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    KOREF_S1: phased, parental trio-binned Korean reference genome using long reads and Hi-C sequencing methods
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    ncbi.nlm.nih.gov/pmc/articles/PMC8952264/
  79. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly, annotation, and phylogenomics of the gooseneck barnacle Pollicipes pollicipes
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8917513/
  80. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    High-quality assembly of the reference genome for scarlet sage, Salvia splendens, an economically important ornamental plant
    1
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    ncbi.nlm.nih.gov/labs/pmc/articles/PMC6030905/
  81. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Fully resolved assembly of Cryptosporidium parvum
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    ncbi.nlm.nih.gov/pmc/articles/PMC8848321/
  82. Feb 2022
  83. academic.oup.com academic.oup.com
    An improved ovine reference genome assembly to facilitate in-depth functional annotation of the sheep genome
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giab096/6521876
  84. Nov 2021
  85. academic.oup.com academic.oup.com
    De novo screening of disease-resistant genes from the chromosome-level genome of rare minnow using CRISPR-cas9 random mutation
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    academic.oup.com/gigascience/article/10/11/giab075/6431779
  86. Oct 2021
  87. academic.oup.com academic.oup.com
    Chromosome-level genome assemblies of Channa argus and Channa maculata and comparative analysis of their temperature adaptability
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    academic.oup.com/gigascience/article/10/10/giab070/6407244
  88. Sep 2021
  89. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Uniparental nuclear inheritance following bisexual mating in fungi
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    ncbi.nlm.nih.gov/pmc/articles/PMC8412948/
  90. Aug 2021
  91. academic.oup.com academic.oup.com
    Untitled document
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    academic.oup.com/gigascience/article/8/4/giz027/5426569
  92. academic.oup.com academic.oup.com
    Untitled document
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    academic.oup.com/gigascience/article/7/7/giy068/5040257
  93. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
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    ncbi.nlm.nih.gov/pmc/articles/PMC6324554/
  94. academic.oup.com academic.oup.com
    Untitled document
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    academic.oup.com/gigascience/article/8/4/giz033/5429686
  95. Jul 2021
  96. onlinelibrary.wiley.com onlinelibrary.wiley.com
    De Novo Assembly of a Chromosome‐Level Reference Genome of Red Spotted Grouper (Epinephelus akaara) Using Nanopore Sequencing and Hi‐C
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    onlinelibrary.wiley.com/doi/10.1111/1755-0998.13064
  97. Apr 2021
  98. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of the hard-shelled mussel Mytilus coruscus, a widely distributed species from the temperate areas of East Asia
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    academic.oup.com/gigascience/article/10/4/giab024/6247647
  99. academic.oup.com academic.oup.com
    A chromosome-level reference genome of the hazelnut, Corylus heterophylla Fisch
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    academic.oup.com/gigascience/article/10/4/giab027/6237163
  100. academic.oup.com academic.oup.com
    A chromosome-level genome assembly for the Pacific oyster Crassostrea gigas
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    academic.oup.com/gigascience/article/10/3/giab020/6187865
  101. Mar 2021
  102. academic.oup.com academic.oup.com
    Chromosome-level genome assemblies of the malaria vectors Anopheles coluzzii and Anopheles arabiensis
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    academic.oup.com/gigascience/article/10/3/giab017/6170950
  103. academic.oup.com academic.oup.com
    Genome sequence and genetic diversity analysis of an under-domesticated orphan crop, white fonio (Digitaria exilis)
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    academic.oup.com/gigascience/article/10/3/giab013/6168810
  104. academic.oup.com academic.oup.com
    Accurate Haplotype-Resolved Assembly Reveals The Origin Of Structural Variants For Human Trios
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    academic.oup.com/bioinformatics/advance-article/doi/10.1093/bioinformatics/btab068/6128392
  105. Feb 2021
  106. academic.oup.com academic.oup.com
    The draft genome sequence of the grove snail Cepaea nemoralis
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    academic.oup.com/g3journal/article-abstract/11/2/jkaa071/6080775
  107. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Evaluating the genome and resistome of extensively drug-resistant Klebsiella pneumoniae using native DNA and RNA Nanopore sequencing
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    ncbi.nlm.nih.gov/pmc/articles/PMC6998412/
  108. academic.oup.com academic.oup.com
    Genomic diversity affects the accuracy of bacterial single-nucleotide polymorphism–calling pipelines
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    academic.oup.com/gigascience/article/9/2/giaa007/5728470
  109. Jan 2021
  110. academic.oup.com academic.oup.com
    Comparison of long-read methods for sequencing and assembly of a plant genome
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    academic.oup.com/gigascience/article/9/12/giaa146/6042729
  111. Dec 2020
  112. academic.oup.com academic.oup.com
    Genome sequencing of deep-sea hydrothermal vent snails reveals adaptions to extreme environments
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    academic.oup.com/gigascience/article/9/12/giaa139/6034786
  113. academic.oup.com academic.oup.com
    High-quality chromosome-level genome assembly and full-length transcriptome analysis of the pharaoh ant Monomorium pharaonis
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    academic.oup.com/gigascience/article/9/12/giaa143/6034789
  114. academic.oup.com academic.oup.com
    Comparison of the two up-to-date sequencing technologies for genome assembly: HiFi reads of Pacific Biosciences Sequel II system and ultralong reads of Oxford Nanopore
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    academic.oup.com/gigascience/article/9/12/giaa123/6034784
  115. Sep 2020
  116. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Long-read only assembly of Drechmeria coniospora genomes reveals widespread chromosome plasticity and illustrates the limitations of current nanopore methods
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    pubmed.ncbi.nlm.nih.gov/32947622/
  117. academic.oup.com academic.oup.com
    Chromosomal-level assembly of Juglans sigillata genome using Nanopore, BioNano, and Hi-C analysis
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    academic.oup.com/gigascience/article/9/2/giaa006/5758190
  118. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Draft Genome of the Asian Buffalo Leech Hirudinaria manillensis
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    ncbi.nlm.nih.gov/pmc/articles/PMC6977106/
  119. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A haplotype-resolved, de novo genome assembly for the wood tiger moth (Arctia plantaginis) through trio binning
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    ncbi.nlm.nih.gov/pmc/articles/PMC7433188/
  120. academic.oup.com academic.oup.com
    Generation of a chromosome-scale genome assembly of the insect-repellent terpenoid-producing Lamiaceae species, Callicarpa americana
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    academic.oup.com/gigascience/article/9/9/giaa093/5902285
  121. academic.oup.com academic.oup.com
    TGS-GapCloser: A fast and accurate gap closer for large genomes with low coverage of error-prone long reads
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    academic.oup.com/gigascience/article/9/9/giaa094/5902284
  122. academic.oup.com academic.oup.com
    Canfam_GSD: De novo chromosome-length genome assembly of the German Shepherd Dog (Canis lupus familiaris) using a combination of long reads, optical mapping, and Hi-C
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    academic.oup.com/gigascience/article/9/4/giaa027/5813919
  123. academic.oup.com academic.oup.com
    De novo assembly of the cattle reference genome with single-molecule sequencing
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    academic.oup.com/gigascience/article/9/3/giaa021/5810242
  124. academic.oup.com academic.oup.com
    Chromosome-level genome assembly and annotation of the loquat ( Eriobotrya japonica ) genome
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    academic.oup.com/gigascience/article/9/3/giaa015/5788433
  125. Jan 2020
  126. www.sciencedirect.com www.sciencedirect.com
    A Species-Wide Inventory of NLR Genes and Alleles in Arabidopsis thaliana
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