162 Matching Annotations
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    Unveiling the temporal impact: Exploring dynamic changes in the paediatric solid tumour immune microenvironment through time
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    biorxiv.org/content/10.1101/2025.10.07.680325v1
  3. Sep 2025
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    Common mycorrhizal networks facilitate plant disease resistance by altering rhizosphere microbiome assembly
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    sciencedirect.com/science/article/pii/S1931312825003427
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    2025.09.03.674035v1.full-html.html
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  6. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A telomere-to-telomere genome assembly of koi carp (Cyprinus carpio) using long reads and Hi-C technology
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    pmc.ncbi.nlm.nih.gov/articles/PMC12395963/
  7. Aug 2025
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    A unified cell atlas of vascular plants reveals cell-type foundational genes and accelerates gene discovery
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    Functional Role of Small Extrachromosomal Circular DNA in Colorectal Cancer
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    biorxiv.org/content/10.1101/2025.08.01.668183v1
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    Whole genome sequencing and assembly of the house sparrow, Passer domesticus
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    pmc.ncbi.nlm.nih.gov/articles/PMC12308067/
  11. Jul 2025
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    Identifying genetic variations in emm89 Streptococcus pyogenes associated with severe invasive infections
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    Protocol to distinguish pre-mRNA from mRNA in RNA-protein interaction studies
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    sciencedirect.com/science/article/pii/S2666166725003739
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    FMRP-dependent translational control negatively regulates adapter protein complex 2-mediated endocytosis
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    Predictive modeling of oocyte maternal mRNA features of five mammalian species reveals potential shared and species-restricted regulators during maturation
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    52.53.155.43/38993d52fb0f592456a9c76c00b488b279a4abc8/schall-latham-2023-predictive-modeling-of-oocyte-maternal-mrna-features-for-five-mammalian-species-reveals-potential-html.html
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    The pyrethroid insecticide deltamethrin disrupts neuropeptide and monoamine signaling pathways in the gastrointestinal tract
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    dx.doi.org/10.1093/toxsci/kfaf076
  17. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A telomere-to-telomere gapless genome reveals SlPRR1 control of circadian rhythm and photoperiodic flowering in tomato
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    pmc.ncbi.nlm.nih.gov/articles/PMC12218202/
  18. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The genome of Hippophae salicifolia provides new insights into the sexual differentiation of sea buckthorn
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  19. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Distinct adaptation and epidemiological success of different genotypes within Salmonella enterica serovar Dublin
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  20. Jun 2025
  21. rupress.org rupress.org
    Gut dysbiosis from high-salt diet promotes glioma via propionate-mediated TGF-β activation
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    Low-Glucose Culture Conditions Bias Neuronal Energetics Towards Oxidative Phosphorylation
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    Chromosome-Level genome assembly and transcriptome analysis of the ural owl, Strix uralensis Pallas, 1771
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    Identification of key genes regulating brown adipose tissue thermogenesis in goat kids (Capra hircus) by using weighted gene co-expression network analysis
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    Spatial–Temporal Diversity of Extrachromosomal DNA Shapes Urothelial Carcinoma Evolution and the Tumor Immune Microenvironment
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    Chromosome-level genome assembly of Pinus massoniana provides insights into conifer adaptive evolution
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  28. May 2025
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    Immunohistochemical and molecular evolutionary features of jejunoileal adenocarcinoma unveiled through comparative analysis with colorectal adenocarcinoma
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    M6Allele: a toolkit for detection of allele-specific RNA N6-methyladenosine modifications
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  31. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Efficiently constructing complete genomes with CycloneSEQ to fill gaps in bacterial draft assemblies
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  32. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Repeatome diversity in sea anemone genomics (Cnidaria: Actiniaria) based on the Actiniaria-REPlib library
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  33. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A near telomere-to-telomere genome assembly of the Jinhua pig: enabling more accurate genetic research
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    Telomere-to-telomere genome of common bean (Phaseolus vulgaris L., YP4)
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    dx.doi.org/10.1093/gigascience/giaf001
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    MCRS1 sensitizes T cell–dependent immunotherapy by augmenting MHC-I expression in solid tumors
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    Immunosequencing identifies signatures of T cell responses for early detection of nasopharyngeal carcinoma
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  37. Apr 2025
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    Metabolite-dependent m6A methylation driven by mechanotransduction-metabolism-epitranscriptomics axis promotes bone development and regeneration
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    Ultrasensitive Detection and Monitoring of Circulating Tumor DNA Using Structural Variants in Early-Stage Breast Cancer
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    pmc.ncbi.nlm.nih.gov/articles/PMC11994999/
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    Genome assembly and annotation of Acropora pulchra from Mo’orea French Polynesia
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    Constructing a draft Indian cattle pangenome using short-read sequencing
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    Interleukin-33 (IL-33) promotes DNA damage-resistance in lung cancer
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    Non-invasive multi-cancer detection using DNA hypomethylation of LINE-1 retrotransposons
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    Does hybridisation with an invasive species threaten Europe’s most endangered reptile? Genomic assessment of Aeolian lizards on Vulcano Island
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  47. Mar 2025
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    Characteristics and filtering of low-frequency artificial short deletion variations based on nanopore sequencing
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  50. link.springer.com link.springer.com
    Microbial dysbiosis with tryptophan metabolites alteration in lower respiratory tract is associated with clinical responses to anti-PD-1 immunotherapy in advanced non-small cell lung cancer
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    link.springer.com/article/10.1007/s00262-025-03996-3
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    Multiomics analysis provides insights into musk secretion in muskrat and musk deer
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    Outer radial glia promotes white matter regeneration after neonatal brain injury
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  53. Feb 2025
  54. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Genomic evidence for hybridization and introgression between blue peafowl and endangered green peafowl and molecular foundation of leucistic plumage of blue peafowl
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    The telomere-to-telomere genome of flowering cherry (Prunus campanulata) reveals genomic evolution of the subgenus Cerasus
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    Effect of MisMatch repair deficiency on metastasis occurrence in a syngeneic mouse model
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    RBM43 controls PGC1α translation and a PGC1α-STING signaling axis
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    Multiomics Profiling Distinguishes Sebaceous Carcinoma from Benign Sebaceous Neoplasms and Provides Insight into the Genetic Evolution of Sebaceous Carcinogenesis
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    KLF3 impacts insulin sensitivity and glucose uptake in skeletal muscle
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    journals.physiology.org/doi/10.1152/ajpcell.00085.2024
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    KLF3 impacts insulin sensitivity and glucose uptake in skeletal muscle
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    The nisin O cluster: species dissemination, candidate leader peptide proteases and the role of regulatory systems
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  64. jasbsci.biomedcentral.com jasbsci.biomedcentral.com
    Advancing the Indian cattle pangenome: characterizing non-reference sequences in Bos indicus
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  65. Jan 2025
  66. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Genomes reveal pervasive distant hybridization in nature among cyprinid fishes
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    Cytoplasmic mRNA decay controlling inflammatory gene expression is determined by pre-mRNA fate decision
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    Spatial and Single-Cell Analyses Reveal Heterogeneity of DNAM-1 Receptor–Ligand Interactions That Instructs Intratumoral γδT-cell Activity
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    A practical distribution pattern of α-SMA-positive carcinoma associated fibroblasts indicates poor prognosis of patients with pancreatic ductal adenocarcinoma
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    Efficacy of CBP/p300 Dual Inhibitors against De-repression of KREMEN2 in cBAF-Deficient Cancers
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  71. Dec 2024
  72. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The chromosome-level genome assembly of an endangered herb Bergenia scopulosa provides insights into local adaptation and genomic vulnerability under climate change
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    Control of 3′ splice site selection by the yeast splicing factor Fyv6
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    Development and validation of the utLIFE-PC algorithm for noninvasive detection of prostate cancer in urine: A prospective, observational study
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    The phosphatase PP1 sustains global transcription by promoting RNA polymerase II pause release
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  76. Nov 2024
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    Modeling early phenotypes of Parkinson’s disease by age-induced midbrain-striatum assembloids
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    ISWI chromatin remodeling complexes recruit NSD2 and H3K36me2 in pericentromeric heterochromatin
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  79. Sep 2024
  80. academic.oup.com academic.oup.com
    Genomic insights into endangerment and conservation of the garlic-fruit tree (Malania oleifera), a plant species with extremely small populations
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giae070/7765447
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    Whole-genome sequencing of the invasive golden apple snail Pomacea canaliculata from Asia reveals rapid expansion and adaptive evolution
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    Genome-wide DNA methylation sequencing reveals the involvement of ferroptosis in hepatotoxicity induced by dietary exposure to food-grade titanium dioxide
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  83. Aug 2024
  84. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The Lactate Receptor GPR81 is a Mechanism of Leukemia-Associated Macrophage Polarization in the Bone Marrow Microenvironment
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    Mitochondrial serine catabolism safeguards maintenance of the hematopoietic stem cell pool in homeostasis and injury
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  86. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Released bacterial ATP shapes local and systemic inflammation during abdominal sepsis
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    A trade-off in evolution: the adaptive landscape of spiders without venom glands
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  88. Jul 2024
  89. www.biorxiv.org www.biorxiv.org
    Advancing the Indian Cattle Pangenome: Characterizing Non-Reference Sequences in Bos indicus
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    biorxiv.org/content/10.1101/2024.07.18.604025v1
  90. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The Pgb1 locus controls glycogen aggregation in astrocytes of the aged hippocampus without impacting cognitive function
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    ncbi.nlm.nih.gov/pmc/articles/PMC10690248/
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    A ghost moth olfactory prototype of the lepidopteran sex communication
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    ncbi.nlm.nih.gov/pmc/articles/PMC11258902/
  92. www.science.org www.science.org
    The annotation of GBA1 has been concealed by its protein-coding pseudogene GBAP1
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    science.org/doi/10.1126/sciadv.adk1296
  93. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Gapless genome assembly and epigenetic profiles reveal gene regulation of whole-genome triplication in lettuce
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    ncbi.nlm.nih.gov/pmc/articles/PMC11238431/
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    The annotation of GBA1 has been concealed by its protein-coding pseudogene GBAP1
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  95. Jun 2024
  96. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    LRTK: a platform agnostic toolkit for linked-read analysis of both human genome and metagenome
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    Neoadjuvant sintilimab plus chemotherapy in EGFR-mutant NSCLC: Phase 2 trial interim results (NEOTIDE/CTONG2104)
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    Mechanisms of hepatic steatosis in chickens: integrated analysis of the host genome, molecular phenomics and gut microbiome
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  99. May 2024
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    Reciprocal conversion between annual and polycarpic perennial flowering behavior in the Brassicaceae
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  103. Mar 2024
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    PUS1 regulates erythropoiesis via tRNA pseudouridylation and cytoplasmic translation
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  105. Jan 2024
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    Near chromosome-level and highly repetitive genome assembly of the snake pipefish Entelurus aequoreus (Syngnathiformes: Syngnathidae)
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  108. Nov 2023
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    Genomic and transcriptomic characterization of delta SARS-CoV-2 infection in free-ranging white-tailed deer (Odocoileus virginianus)
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    Age-induced midbrain-striatum assembloids model early phenotypes of Parkinson’s disease
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  112. Oct 2023
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    Molecular and functional characterization of the Drosophila melanogaster conserved smORFome
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  114. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The chromosome-level genome of Chinese praying mantis Tenodera sinensis (Mantodea: Mantidae) reveals its biology as a predator
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    The first genome sequence of Anopheles squamous from Macha, Zambia
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    Individualized tumor-informed circulating tumor DNA analysis for postoperative monitoring of non-small cell lung cancer
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    Acquisition of Neural Fate by Combination of BMP Blockade and Chromatin Modification
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  118. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Construction and analysis of the chromosome-level haplotype-resolved genomes of two Crassostrea oyster congeners: Crassostrea angulata and Crassostrea gigas
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  119. Sep 2023
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    Variation in the CENP-A sequence association landscape across diverse inbred mouse strains
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    Integration of eQTL and machine learning to dissect causal genes with pleiotropic effects in genetic regulation networks of seed cotton yield
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  122. Aug 2023
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    Genome resequencing reveals independent domestication and breeding improvement of naked oat
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  124. Jul 2023
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    The stability of the myelinating oligodendrocyte transcriptome is regulated by the nuclear lamina
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    Identification of sex chromosomes and primary sex ratio in the small hive beetle, a worldwide parasite of honey bees
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  128. Jun 2023
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    The maturation and aging trajectory of Marchantia polymorpha at single-cell resolution
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    Inhibition of high-fat diet-induced inflammatory responses in adipose tissue by SF1-expressing neurons of the ventromedial hypothalamus
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  131. May 2023
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    KMT2D Deficiency Promotes Myeloid Leukemias which Is Vulnerable to Ribosome Biogenesis Inhibition
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  133. Apr 2023
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    INTAC endonuclease and phosphatase modules differentially regulate transcription by RNA polymerase II
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    Molecular mechanisms underlying hematophagia revealed by comparative analyses of leech genomes
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  136. academic.oup.com academic.oup.com
    GEN-ERA toolbox: unified and reproducible workflows for research in microbial genomics
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    A chromosome-scale high-contiguity genome assembly of the cheetah (Acinonyx jubatus)
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  138. Mar 2023
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    Metagenomic analysis of coastal Kenya female Aedes aegypti mosquito ...
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  140. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Atria: an ultra-fast and accurate trimmer for adapter and quality trimming
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    Neuronal identity defines α-synuclein and tau toxicity
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  142. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    ViReMa: a virus recombination mapper of next-generation sequencing data characterizes diverse recombinant viral nucleic acids
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  143. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genome of the mustard hill coral, Porites astreoides
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  144. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Long-read assemblies reveal structural diversity in genomes of organelles – an example with Acacia pycnantha
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  145. Feb 2023
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    Comprehensive genomic profiling of upper tract urothelial carcinoma and urothelial carcinoma of the bladder identifies distinct molecular characterizations with potential implications for targeted therapy & immunotherapy
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    A chromosome-level genome assembly of Ostrea denselamellosa provides initial insights into its evolution
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  148. Jan 2023
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    Human Papillomavirus 42 Drives Digital Papillary Adenocarcinoma and Elicits a Germ Cell–like Program Conserved in HPV-Positive Cancers
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  150. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome-level genome assembly of Dastarcus helophoroides provides insights into CYP450 genes expression upon insecticide exposure
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  151. Dec 2022
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    Chromosomal-level genome and multi-omics dataset provides new insights into leaf pigmentation in Acer palmatum
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    Relative infectivity of the SARS-CoV-2 Omicron variant in human alveolar cells
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  154. Nov 2022
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    Necessity of integrated genomic analysis to establish a designed knock-in mouse from CRISPR-Cas9-induced mutants
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  156. academic.oup.com academic.oup.com
    Capparis spinosa var. herbacea genome provides the first genomic instrument for a diversity and evolution study of the Capparaceae family
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  157. Oct 2022
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    Human PSCs determine the competency of cerebral organoid differentiation via FGF signaling and epigenetic mechanisms
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  159. Aug 2022
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    Npas3 deficiency impairs cortical astrogenesis and induces autistic-like behaviors
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    The sage genome provides insight into the evolutionary dynamics of diterpene biosynthesis gene cluster in plants
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  162. Jul 2022
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    A chromosome-scale genome assembly of the okapi (Okapia johnstoni)
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    Spatiotemporal genomic analysis reveals distinct molecular features in recurrent stage I non-small cell lung cancers
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    A chromosome-level genome assembly and intestinal transcriptome of Trypoxylus dichotomus (Coleoptera: Scarabaeidae) to understand its lignocellulose digestion ability
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  166. May 2022
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    A chromosome-level reference genome of Ensete glaucum gives insight into diversity and chromosomal and repetitive sequence evolution in the Musaceae
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  168. Apr 2022
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    A chromosome-level genome of the human blood fluke Schistosoma japonicum identifies the genomic basis of host-switching
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  170. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome of the globe skimmer dragonfly (Pantala flavescens)
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  171. Mar 2022
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    Chromosome-length genome assembly and linkage map of a critically endangered Australian bird: the helmeted honeyeater
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  173. Jan 2022
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    Dynamic chromatin state profiling reveals regulatory roles of auxin and cytokinin in shoot regeneration
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  175. Nov 2021
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  177. Oct 2021
  178. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Genome assembly of the Chinese maize elite inbred line RP125 and its EMS mutant collection provide new resources for maize genetics research and crop improvement
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  179. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Tiled-ClickSeq for targeted sequencing of complete coronavirus genomes with simultaneous capture of RNA recombination and minority variants
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  180. Aug 2021
  181. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome‐level assembly of Southern catfish (Silurus meridionalis) provides insights into visual adaptation to the nocturnal and benthic lifestyles
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  182. Jul 2021
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    Genomic evidence of neo-sex chromosomes in the eastern yellow robin
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  184. May 2021
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    Dynamic profiles and transcriptional preferences of histone modifications during spermiogenesis
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    A single-cell analysis of the Arabidopsis vegetative shoot apex
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  187. onlinelibrary.wiley.com onlinelibrary.wiley.com
    How to characterize a strain? Clonal heterogeneity in industrial Saccharomyces influences both phenotypes and heterogeneity in phenotypes
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    Chromatin Accessibility Dynamics and a Hierarchical Transcriptional Regulatory Network Structure for Plant Somatic Embryogenesis
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  189. Mar 2021
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    Chromosome-level genome assemblies of the malaria vectors Anopheles coluzzii and Anopheles arabiensis
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  191. Jan 2021
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    Protocol for assaying chromatin accessibility using ATAC-seq in plants
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  193. academic.oup.com academic.oup.com
    Comparison of long-read methods for sequencing and assembly of a plant genome
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  194. Nov 2020
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    Root-Secreted Coumarins and the Microbiota Interact to Improve Iron Nutrition in Arabidopsis
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  196. Sep 2020
  197. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of the female western mosquitofish ( Gambusia affinis )
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    Chromosome-level genome assembly of Aldrichina grahami , a forensically important blowfly
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  199. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome‐level genome assembly of a cyprinid fish Onychostoma macrolepis by integration of Nanopore Sequencing, Bionano and Hi‐C technology
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  200. Jan 2020
  201. www.sciencedirect.com www.sciencedirect.com
    GCNA Interacts with Spartan and Topoisomerase II to Regulate Genome Stability
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  202. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Whole-genome sequencing and analysis of the Chinese herbal plant Gelsemium elegans
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  203. academic.oup.com academic.oup.com
    De novo genome assembly of the endangered Acer yangbiense , a plant species with extremely small populations endemic to Yunnan Province, China
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