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54.241.53.176 54.241.53.176

The chloride cotransporter NKCC1 regulates self-renewal of hippocampal neural stem cells via the transcription factor Sox11

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1. scibot 20 Aug 2026
  
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  RRID:SCR_017048
  
  DOI: 10.1101/2025.07.01.662334
  
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54.241.53.176/cbca5a04bf326cfd5a60c6f7a0278a9ef23139a1/2025.07.01.662334.full-html.html
Jul 2026
elifesciences.org elifesciences.org

Flexible and high-throughput simultaneous profiling of gene expression and chromatin accessibility in single cells

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1. scibot 22 Jul 2026
  
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  DOI: 10.7554/eLife.110034
  
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elifesciences.org/articles/110034
May 2026
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Experimental and computational methods for allelic imbalance analysis from single-nucleus RNA-seq data

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1. scibot 21 May 2026
  
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  RRID:SCR_017048
  
  DOI: 10.1186/s13059-026-04062-6
  
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pmc.ncbi.nlm.nih.gov/articles/PMC13185290/
Apr 2026
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Single-Cell Lineage Tracing Uncovers Resistance Signatures and Sensitizing Strategies to FLT3 Inhibitors in Acute Myeloid Leukemia

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1. scibot 08 Apr 2026
  
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  RRID:SCR_017048
  
  DOI: 10.1158/0008-5472.CAN-24-3753
  
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pmc.ncbi.nlm.nih.gov/articles/PMC7618455/
Mar 2026
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DCPS modulates TDP-43-linked neurodegeneration through P-body-mediated RNA decay

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1. scibot 10 Mar 2026
  
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  RRID:SCR_017048
  
  DOI: 10.1016/j.neuron.2026.01.018
  
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sciencedirect.com/science/article/pii/S0896627326000449
Feb 2026
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Cytoplasmic mRNA decay by the antiviral nuclease RNase L promotes transcriptional repression

1
1. scibot 27 Feb 2026
  
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  DOI: 10.1016/j.celrep.2026.117028
  
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sciencedirect.com/science/article/pii/S2211124726001063
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Divergent tumor immunity determined by bacteria-cancer cell engagement

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1. scibot 05 Feb 2026
  
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  DOI: 10.1016/j.cell.2025.12.044
  
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sciencedirect.com/science/article/pii/S009286742501493X
Aug 2025
elifesciences.org elifesciences.org

Transcriptional dynamics uncover the role of BNIP3 in mitophagy during muscle remodeling in Drosophila

1
1. scibot 15 Aug 2025
  
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  RRID:SCR_017048
  
  DOI: 10.7554/eLife.105834
  
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elifesciences.org/articles/105834
Jul 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Modular DNA barcoding of nanobodies enables multiplexed in situ protein imaging and high-throughput biomolecule detection

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1. scibot 25 Jul 2025
  
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  RRID:SCR_017048
  
  DOI: 10.7554/eLife.105225
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12283080/
Apr 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Decoding m6Am by simultaneous transcription-start mapping and methylation quantification

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1. scibot 02 Apr 2025
  
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  DOI: 10.7554/eLife.104139
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11957539/
Feb 2025
aacrjournals.org aacrjournals.org

Clonal Lineage Tracing with Somatic Delivery of Recordable Barcodes Reveals Migration Histories of Metastatic Prostate Cancer

1
1. scibot 14 Feb 2025
  
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  RRID:SCR_017048
  
  DOI: 10.1158/2159-8290.CD-23-1332
  
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aacrjournals.org/cancerdiscovery/article/14/10/1990/748601/Clonal-Lineage-Tracing-with-Somatic-Delivery-of
Jan 2025
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Cytoplasmic mRNA decay controlling inflammatory gene expression is determined by pre-mRNA fate decision

1
1. scibot 28 Jan 2025
  
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  RRID:SCR_017048
  
  DOI: 10.1016/j.molcel.2025.01.001
  
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sciencedirect.com/science/article/pii/S1097276525000012
Dec 2024
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The phosphatase PP1 sustains global transcription by promoting RNA polymerase II pause release

1
1. scibot 02 Dec 2024
  
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  RRID:SCR_017048
  
  DOI: 10.1016/j.molcel.2024.10.046
  
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sciencedirect.com/science/article/pii/S1097276524008852
Aug 2024
www.biorxiv.org www.biorxiv.org

Experimental and Computational Methods for Allelic Imbalance Analysis from Single-Nucleus RNA-seq Data

1
1. scibot 23 Aug 2024
  
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  RRID:SCR_017048
  
  DOI: 10.1101/2024.08.13.607784
  
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biorxiv.org/content/10.1101/2024.08.13.607784v1
Jul 2024
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Analyzing embryo dormancy at single-cell resolution reveals dynamic transcriptional responses and activation of integrin-Yap/Taz prosurvival signaling

1
1. scibot 25 Jul 2024
  
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  RRID:SCR_017048
  
  DOI: 10.1016/j.stem.2024.06.015
  
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sciencedirect.com/science/article/pii/S1934590924002509
May 2024
www.cell.com www.cell.com

The CD8+ T cell tolerance checkpoint triggers a distinct differentiation state defined by protein translation defects

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1. scibot 23 May 2024
  
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  RRID:SCR_017048
  
  DOI: 10.1016/j.immuni.2024.04.026
  
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cell.com/immunity/fulltext/S1074-7613(24)00231-0
elifesciences.org elifesciences.org

Ribosome subunit attrition and activation of the p53–MDM4 axis dominate the response of MLL-rearranged cancer cells to WDR5 WIN site inhibition

1
1. scibot 03 May 2024
  
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  RRID:SCR_017048
  
  DOI: 10.7554/eLife.90683
  
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elifesciences.org/articles/90683
Apr 2024
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Detection of ac4C in human mRNA is preserved upon data reassessment

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1. scibot 20 Apr 2024
  
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  RRID:SCR_017048
  
  DOI: 10.1016/j.molcel.2024.03.018
  
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sciencedirect.com/science/article/pii/S1097276524002284
Mar 2024
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Patient derived tumoroids of high grade neuroendocrine neoplasms for more personalized therapies

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1. scibot 06 Mar 2024
  
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  RRID:SCR_017048
  
  DOI: 10.1038/s41698-024-00549-2
  
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ncbi.nlm.nih.gov/pmc/articles/PMC10907580/
Oct 2023
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

nf-core/clipseq - a robust Nextflow pipeline for comprehensive CLIP data analysis

1
1. scibot 14 Oct 2023
  
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  RRID:SCR_017048
  
  DOI: 10.12688/wellcomeopenres.19453.1
  
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ncbi.nlm.nih.gov/pmc/articles/PMC10565428/
Sep 2023
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Single-cell multi-omics defines the cell-type-specific impact of splicing aberrations in human hematopoietic clonal outgrowths

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1. scibot 29 Sep 2023
  
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  RRID:SCR_017048
  
  DOI: 10.1016/j.stem.2023.07.012
  
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sciencedirect.com/science/article/pii/S1934590923002576
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Influenza virus transcription and progeny production are poorly correlated in single cells

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1. scibot 09 Sep 2023
  
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  RRID:SCR_017048
  
  DOI: 10.7554/eLife.86852
  
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ncbi.nlm.nih.gov/pmc/articles/PMC10484525/
Jul 2023
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Title: TET1 Facilitates Specification of Early Human Lineages including Germ Cells

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1. scibot 15 Jul 2023
  
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  RRID:SCR_017048
  
  DOI: 10.1016/j.isci.2023.107191
  
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sciencedirect.com/science/article/pii/S2589004223012683
Jun 2023
www.nature.com www.nature.com

Extracellular vesicle-associated IGF2BP3 tunes Ewing sarcoma cell migration and affects PI3K/Akt pathway in neighboring cells

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1. scibot 27 Jun 2023
  
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  RRID:SCR_017048
  
  DOI: 10.1038/s41417-023-00637-8
  
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nature.com/articles/s41417-023-00637-8
Apr 2023
www.sciencedirect.com www.sciencedirect.com

INTAC endonuclease and phosphatase modules differentially regulate transcription by RNA polymerase II

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1. scibot 20 Apr 2023
  
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  RRID:SCR_017048
  
  DOI: 10.1016/j.molcel.2023.03.022
  
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sciencedirect.com/science/article/pii/S1097276523002125
Mar 2023
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A central chaperone-like role for 14-3-3 proteins in human cells

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1. scibot 17 Mar 2023
  
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  RRID:SCR_017048
  
  DOI: 10.1016/j.molcel.2023.02.018
  
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sciencedirect.com/science/article/pii/S1097276523001211
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A cell-type-specific alternative splicing regulator shapes synapse properties in a trans-synaptic manner

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1. scibot 02 Mar 2023
  
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  RRID:SCR_017048
  
  DOI: 10.1016/j.celrep.2023.112173
  
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sciencedirect.com/science/article/pii/S2211124723001845
Oct 2022
www.cell.com www.cell.com

Motor neurons use push-pull signals to direct vascular remodeling critical for their connectivity

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1. scibot 18 Oct 2022
  
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  SCR_017048
  
  DOI: 10.1016/j.neuron.2022.09.021
  
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cell.com/neuron/fulltext/S0896-6273(22)00860-1
Oct 2021
www.cell.com www.cell.com

Conserved heterodimeric GTPase Rbg1/Tma46 promotes efficient translation in eukaryotic cells

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1. scibot 27 Oct 2021
  
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  RRID:SCR_017048
  
  DOI: 10.1016/j.celrep.2021.109877
  
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cell.com/cell-reports/fulltext/S2211-1247(21)01347-4
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Tiled-ClickSeq for targeted sequencing of complete coronavirus genomes with simultaneous capture of RNA recombination and minority variants

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1. scibot 02 Oct 2021
  
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  DOI: 10.7554/eLife.68479
  
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ncbi.nlm.nih.gov/pmc/articles/PMC8478411/
Jul 2021
elifesciences.org elifesciences.org

Sustained expression of HeyL is critical for the proliferation of muscle stem cells in overloaded muscle

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1. scibot 30 Jul 2021
  
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  UMI-tools
  
  DOI: 10.7554/eLife.48284
  
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elifesciences.org/articles/48284