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Jun 2026
www.biorxiv.org www.biorxiv.org

Conserved Cell Type Signatures Across the Brainstem and Spinal Cord in the Mouse Central Nervous System

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1. scibot 16 Jun 2026
  
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  DOI: 10.64898/2026.06.09.728039
  
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biorxiv.org/content/10.64898/2026.06.09.728039v1
Apr 2026
www.biorxiv.org www.biorxiv.org

A Community Standard Multispecies Cell Atlas of the Basal Ganglia

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1. scibot 25 Apr 2026
  
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  DOI: 10.64898/2026.04.14.717814
  
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2. scibot 23 Apr 2026
  
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  DOI: 10.64898/2026.04.14.717814
  
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biorxiv.org/content/10.64898/2026.04.14.717814v1
arxiv.org arxiv.org

2510.17064v3.pdf

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1. scibot 03 Apr 2026
  
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  DOI: 10.48550/arXiv.2510.17064
  
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arxiv.org/pdf/2510.17064
link.springer.com link.springer.com

Cross-expression meta-analysis of mouse brain slices reveals coordinated gene expression across spatially adjacent cells

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1. scibot 03 Apr 2026
  
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  (https:/doi.brainimagelibrary.org/doi/10.35077/act-bag
  
  DOI: 10.1186/s13059-025-03747-8
  
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link.springer.com/article/10.1186/s13059-025-03747-8
Feb 2026
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Relational Database-Based Resource-Provenance Visualization Engine: with an application to BICAN data

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1. scibot 21 Feb 2026
  
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  RRID:SCR_017272
  
  DOI: 10.3390/jpm13060991. [DOI] [PMC free article] [PubMed] [Google Scholar]
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12919532/
Dec 2025
www.biorxiv.org www.biorxiv.org

Multiscale Spatial Transcriptomic Atlas of Human Basal Ganglia Cell-Type and Cellular Community Organization

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1. scibot 16 Dec 2025
  
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  RRID:SCR_017272
  
  DOI: 10.64898/2025.12.02.691876
  
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biorxiv.org/content/10.64898/2025.12.02.691876v1
Nov 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Transcriptomic and spatial organization of telencephalic GABAergic neurons

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1. scibot 08 Nov 2025
  
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  RRID:SCR_017272
  
  DOI: 10.1038/s41586-025-09296-1
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12589142/
Jun 2025
www.cell.com www.cell.com

Exploring brain circuits, one cell type—or more— at a time

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1. scibot 26 Jun 2025
  
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  RRID:SCR_017272
  
  DOI: 10.1016/j.neuron.2025.05.001
  
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cell.com/neuron/abstract/S0896-6273(25)00348-4
Nov 2024
www.nature.com www.nature.com

The Brain Image Library: A Community-Contributed Microscopy Resource for Neuroscientists

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1. scibot 14 Nov 2024
  
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  RRID:SCR_017272
  
  DOI: 10.1038/s41597-024-03761-8
  
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nature.com/articles/s41597-024-03761-8
Aug 2024
www.nature.com www.nature.com

Cellular anatomy of the mouse primary motor cortex

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1. scibot 02 Aug 2024
  
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  https://www.brainimagelibrary.org/
  
  DOI: 10.1038/s41586-021-03970-w
  
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nature.com/articles/s41586-021-03970-w
academic.oup.com academic.oup.com

Image enhancement to leverage the 3D morphological reconstruction of single-cell neurons

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1. scibot 02 Aug 2024
  
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  https://www.brainimagelibrary.org
  
  DOI: 10.1093/bioinformatics/btab638
  
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academic.oup.com/bioinformatics/article-abstract/38/2/503/6369506
Jul 2024
elifesciences.org elifesciences.org

Origin of wiring specificity in an olfactory map revealed by neuron type–specific, time-lapse imaging of dendrite targeting

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1. scibot 24 Jul 2024
  
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  DOI https://doi.org/10.35077/g.933.
  
  DOI: 10.7554/eLife.85521
  
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elifesciences.org/articles/85521
Apr 2024
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Somatotopic organization among parallel sensory pathways that promote a grooming sequence in Drosophila

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1. scibot 20 Apr 2024
  
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  RRID:SCR_017272
  
  DOI: 10.7554/eLife.87602
  
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ncbi.nlm.nih.gov/pmc/articles/PMC11026096/
Feb 2024
www.biorxiv.org www.biorxiv.org

The Brain Image Library: A Community-Contributed Microscopy Resource for Neuroscientists

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1. scibot 15 Feb 2024
  
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  RRID:SCR_017272
  
  DOI: 10.1101/2023.12.22.573024
  
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biorxiv.org/content/10.1101/2023.12.22.573024v2
Jan 2024
www.biorxiv.org www.biorxiv.org

The Brain Image Library: A Community-Contributed Microscopy Resource for Neuroscientists

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1. scibot 23 Jan 2024
  
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  RRID:SCR_017272
  
  DOI: 10.1101/2023.12.22.573024
  
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biorxiv.org/content/10.1101/2023.12.22.573024v2
Sep 2023
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Full-Spectrum Neuronal Diversity and Stereotypy through Whole Brain Morphometry

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1. scibot 16 Sep 2023
  
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  BIL
  
  DOI: 10.21203/rs.3.rs-3146034/v1
  
  Resource: Brain Image Library (RRID:SCR_017272)
  
  Curator: @bandrow
  
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ncbi.nlm.nih.gov/pmc/articles/PMC10402258/
Jul 2023
journals.plos.org journals.plos.org

A guide to the BRAIN Initiative Cell Census Network data ecosystem

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1. scibot 04 Jul 2023
  
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  RRID:SCR_017272
  
  DOI: 10.1371/journal.pbio.3002133
  
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journals.plos.org/plosbiology/article
Feb 2023
www.biorxiv.org www.biorxiv.org

The BRAIN Initiative Cell Census Network Data Ecosystem: A User’s Guide

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1. scibot 09 Feb 2023
  
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  RRID:SCR_017272
  
  DOI: 10.1101/2022.10.26.513573
  
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biorxiv.org/content/10.1101/2022.10.26.513573v1
Jul 2022
elifesciences.org elifesciences.org

Analysis of rod/cone gap junctions from the reconstruction of mouse photoreceptor terminals

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1. scibot 09 Jul 2022
  
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  brainimagelibrary
  
  DOI: 10.7554/eLife.73039
  
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elifesciences.org/articles/73039
May 2022
onlinelibrary.wiley.com onlinelibrary.wiley.com

The spectrum of data sharing policies in neuroimaging data repositories

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1. scibot 28 May 2022
  
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  (brainimagelibrary.org)
  
  DOI: 10.1002/hbm.25803
  
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onlinelibrary.wiley.com/doi/full/10.1002/hbm.25803
Apr 2022
link.springer.com link.springer.com

Farewell, Neuroinformatics!

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1. scibot 13 Apr 2022
  
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  https://www.brainimagelibrary.org/
  
  DOI: 10.1007/s12021-021-09552-5
  
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link.springer.com/article/10.1007/s12021-021-09552-5
Oct 2021
www.nature.com www.nature.com

A multimodal cell census and atlas of the mammalian primary motor cortex

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1. scibot 21 Oct 2021
  
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  SCR_017272
  
  DOI: 10.1038/s41586-021-03950-0
  
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nature.com/articles/s41586-021-03950-0
Jun 2021
www.nature.com www.nature.com

Phenotypic variation of transcriptomic cell types in mouse motor cortex

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1. scibot 05 Jun 2021
  
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  https://download.brainimagelibrary.org
  
  DOI: 10.1038/s41586-020-2907-3
  
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nature.com/articles/s41586-020-2907-3