36 Matching Annotations
  1. Last 7 days
  2. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Construction and analysis of telomere-to-telomere genomes for 2 sweet oranges: Longhuihong and Newhall (Citrus sinensis)
    1
    1. scibot 21 Dec 2024
      RRID:SCR_018171

      DOI: 10.1093/gigascience/giae084

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    pmc.ncbi.nlm.nih.gov/articles/PMC11590112/
  3. Nov 2024
  4. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Advancing apple genetics research: Malus coronaria and Malus ioensis genomes and a gene family-based pangenome of native North American apples
    1
    1. scibot 07 Nov 2024
      RRID:SCR_018171

      DOI: 10.1093/dnares/dsae026

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    pmc.ncbi.nlm.nih.gov/articles/PMC11489038/
  5. Sep 2024
  6. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Telomere-to-telomere gap-free genome assembly of the endangered Yangtze finless porpoise and East Asian finless porpoise
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    1. scibot 18 Sep 2024
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      DOI: 10.1093/gigascience/giae067

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    ncbi.nlm.nih.gov/pmc/articles/PMC11403816/
  7. Jul 2024
  8. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Gapless genome assembly and epigenetic profiles reveal gene regulation of whole-genome triplication in lettuce
    1
    1. scibot 14 Jul 2024
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    ncbi.nlm.nih.gov/pmc/articles/PMC11238431/
  9. Jun 2024
  10. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Exploring the role of polymorphic interspecies structural variants in reproductive isolation and adaptive divergence in Eucalyptus
    1
    1. scibot 22 Jun 2024
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      DOI: 10.1093/gigascience/giae029

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    ncbi.nlm.nih.gov/pmc/articles/PMC11170218/
  11. May 2024
  12. www.biorxiv.org www.biorxiv.org
    Advancing apple genetics research: Malus coronaria and Malus ioensis genomes and a gene family-based pangenome of native North American apples
    1
    1. scibot 23 May 2024
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      DOI: 10.1101/2024.05.13.593769

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    biorxiv.org/content/10.1101/2024.05.13.593769v1
  13. Feb 2024
  14. dx.doi.org dx.doi.org
    Long read genome assembly of Automeris io (Lepidoptera: Saturniidae) an emerging model for the evolution of deimatic displays
    1
    1. scibot 08 Feb 2024
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      DOI: 10.1093/g3journal/jkad292

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    dx.doi.org/10.1093/g3journal/jkad292
  15. Jan 2024
  16. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level phased genome assembly of ‘Antonovka’ identified candidate apple scab resistance genes highly homologous to HcrVf2 and HcrVf1 on linkage group 1
    1
    1. scibot 05 Jan 2024
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      DOI: 10.1093/g3journal/jkad253

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    ncbi.nlm.nih.gov/pmc/articles/PMC10755186/
  17. Sep 2023
  18. www.sciencedirect.com www.sciencedirect.com
    Characterization of the male-specific region containing the candidate sex-determining gene in Amur catfish (Silurus asotus) using third-generation- and pool-sequencing data
    1
    1. scibot 27 Sep 2023
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      DOI: 10.1016/j.ijbiomac.2023.125908

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    sciencedirect.com/science/article/pii/S0141813023028039
  19. Aug 2023
  20. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-scale assembly of the yellow mealworm genome
    1
    1. scibot 31 Aug 2023
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      DOI: 10.12688/openreseurope.13987.3

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    ncbi.nlm.nih.gov/pmc/articles/PMC10445852/
  21. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Haplogenome assembly reveals structural variation in Eucalyptus interspecific hybrids
    1
    1. scibot 29 Aug 2023
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      DOI: 10.1093/gigascience/giad064

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    ncbi.nlm.nih.gov/pmc/articles/PMC10460159/
  22. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome and recombination map of the male buffalo
    1
    1. scibot 26 Aug 2023
      RRID:SCR_018171

      DOI: 10.1093/gigascience/giad063

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    ncbi.nlm.nih.gov/pmc/articles/PMC10433102/
  23. Jul 2023
  24. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A new haplotype-resolved turkey genome to enable turkey genetics and genomics research
    1
    1. scibot 25 Jul 2023
      RRID:SCR_018171

      DOI: 10.1093/gigascience/giad051

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    ncbi.nlm.nih.gov/pmc/articles/PMC10360393/
  25. Apr 2023
  26. link.springer.com link.springer.com
    MRF: a tool to overcome the barrier of inconsistent genome annotations and perform comparative genomics studies for the largest animal DNA virus
    1
    1. scibot 20 Apr 2023
      RRID:SCR_018171

      DOI: 10.1186/s12985-023-02035-w

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    link.springer.com/article/10.1186/s12985-023-02035-w
  27. Mar 2023
  28. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the deep-sea coral Lophelia pertusa
    1
    1. scibot 22 Mar 2023
      RRID:SCR_018171

      DOI: 10.46471/gigabyte.78

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    ncbi.nlm.nih.gov/pmc/articles/PMC10022433/
  29. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    De novo chromosome-length assembly of the mule deer (Odocoileus hemionus) genome
    1
    1. scibot 02 Mar 2023
      RRID:SCR_018171

      DOI: 10.46471/gigabyte.34

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650288/
  30. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A phased, chromosome-scale genome of ‘Honeycrisp’ apple (Malus domestica)
    1
    1. scibot 02 Mar 2023
      RRID:SCR_018171

      DOI: 10.46471/gigabyte.69

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    ncbi.nlm.nih.gov/pmc/articles/PMC9693968/
  31. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The first Antechinus reference genome provides a resource for investigating the genetic basis of semelparity and age-related neuropathologies
    1
    1. scibot 02 Mar 2023
      RRID:SCR_018171

      DOI: 10.46471/gigabyte.7

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    ncbi.nlm.nih.gov/pmc/articles/PMC9631953/
  32. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level assembly of the common vetch (Vicia sativa) reference genome
    1
    1. scibot 02 Mar 2023
      RRID:SCR_018171

      DOI: 10.46471/gigabyte.38

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650280/
  33. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality draft genome for Melaleuca alternifolia (tea tree): a new platform for evolutionary genomics of myrtaceous terpene-rich species
    1
    1. scibot 02 Mar 2023
      RRID:SCR_018171

      DOI: 10.46471/gigabyte.28

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650293/
  34. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level genome assembly and annotation of the maize elite breeding line Dan340
    1
    1. scibot 02 Mar 2023
      RRID:SCR_018171

      DOI: 10.46471/gigabyte.63

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    ncbi.nlm.nih.gov/pmc/articles/PMC9694154/
  35. Sep 2022
  36. academic.oup.com academic.oup.com
    Identification of candidate sex‐specific genomic regions in male and female Asian arowana genomes
    1
    1. scibot 16 Sep 2022
      RRID:SCR_018171

      DOI: 10.1093/gigascience/giac085

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac085/6700067
  37. Jul 2022
  38. academic.oup.com academic.oup.com
    Manchurian Walnut Genome: Insights into Juglone and Lipid Biosynthesis
    1
    1. scibot 06 Jul 2022
      RRID:SCR_018171

      DOI: 10.1093/gigascience/giac057

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac057/6619298
  39. Jun 2022
  40. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Construction of a new chromosome-scale, long-read reference genome assembly for the Syrian hamster, Mesocricetus auratus
    1
    1. scibot 09 Jun 2022
      RRID:SCR_018171

      DOI: 10.1093/gigascience/giac039

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    ncbi.nlm.nih.gov/pmc/articles/PMC9155146/
  41. May 2022
  42. gigabytejournal.com gigabytejournal.com
    LT1, an ONT long-read-based assembly scaffolded with Hi-C data and polished with short reads
    1
    1. scibot 10 May 2022
      RRID:SCR_018171

      DOI: 10.46471/gigabyte.51

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    gigabytejournal.com/articles/51
  43. Apr 2022
  44. www.sciencedirect.com www.sciencedirect.com
    A chromosome-level genome of the human blood fluke Schistosoma japonicum identifies the genomic basis of host-switching
    1
    1. scibot 07 Apr 2022
      RRID:SCR_018171

      DOI: 10.1016/j.celrep.2022.110638

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    sciencedirect.com/science/article/pii/S2211124722003904
  45. Mar 2022
  46. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The haplotype-resolved chromosome pairs of a heterozygous diploid African cassava cultivar reveal novel pan-genome and allele-specific transcriptome features
    1
    1. scibot 31 Mar 2022
      RRID:SCR_018171

      DOI: 10.1093/gigascience/giac028

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    ncbi.nlm.nih.gov/pmc/articles/PMC8952263/
  47. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    KOREF_S1: phased, parental trio-binned Korean reference genome using long reads and Hi-C sequencing methods
    1
    1. scibot 31 Mar 2022
      RRID:SCR_018171

      DOI: 10.1093/gigascience/giac022

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    ncbi.nlm.nih.gov/pmc/articles/PMC8952264/
  48. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Fully resolved assembly of Cryptosporidium parvum
    1
    1. scibot 04 Mar 2022
      RRID:SCR_018171

      DOI: 10.1093/gigascience/giac010

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    ncbi.nlm.nih.gov/pmc/articles/PMC8848321/
  49. Jan 2022
  50. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Highly diverged lineages of Saccharomyces paradoxus in temperate to subtropical climate zones in China
    1
    1. scibot 12 Jan 2022
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      DOI: 10.1002/yea.3688

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    onlinelibrary.wiley.com/doi/10.1002/yea.3688
  51. Jul 2021
  52. www.mdpi.com www.mdpi.com
    Genome of the Southern Giant Petrel Assembled Using Third-Generation DNA Sequencing and Linked Reads Reveals Evolutionary Traits of Southern Avian
    1
    1. scibot 16 Jul 2021
      RRID:SCR_018171

      DOI: 10.3390/ani11072046

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    mdpi.com/2076-2615/11/7/2046
  53. Feb 2021
  54. academic.oup.com academic.oup.com
    The draft genome sequence of the grove snail Cepaea nemoralis
    1
    1. scibot 28 Feb 2021
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      DOI: 10.1093/g3journal/jkaa071

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    academic.oup.com/g3journal/article-abstract/11/2/jkaa071/6080775
  55. Dec 2020
  56. academic.oup.com academic.oup.com
    Long-read assembly of the Brassica napus reference genome Darmor-bzh
    1
    1. scibot 19 Dec 2020
      RRID:SCR_018171

      DOI: 10.1093/gigascience/giaa137

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    academic.oup.com/gigascience/article/9/12/giaa137/6034787
  57. Sep 2020
  58. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Long-read only assembly of Drechmeria coniospora genomes reveals widespread chromosome plasticity and illustrates the limitations of current nanopore methods
    1
    1. scibot 25 Sep 2020
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      DOI: 10.1093/gigascience/giaa099

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    pubmed.ncbi.nlm.nih.gov/32947622/
  59. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A haplotype-resolved, de novo genome assembly for the wood tiger moth (Arctia plantaginis) through trio binning
    1
    1. scibot 23 Sep 2020
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      DOI: 10.1093/gigascience/giaa088

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    ncbi.nlm.nih.gov/pmc/articles/PMC7433188/
  60. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of the female western mosquitofish ( Gambusia affinis )
    1
    1. scibot 10 Sep 2020
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      DOI: 10.1093/gigascience/giaa092

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    academic.oup.com/gigascience/article/9/8/giaa092/5897807