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59 Matching Annotations

Jan 2026
54.241.53.176 54.241.53.176

1-s2.0-S2589004225028810-main-html.html

1
1. scibot 06 Jan 2026
  
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  RRID:SCR_018536
  
  DOI: 10.1016/j.isci.2025.114620
  
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54.241.53.176/9ca975ee2e159cfb42ad711da196f8f6afd560ee/1-s2.0-S2589004225028810-main-html.html
Dec 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Path2Omics Enhances Transcriptomic and Methylation Prediction Accuracy from Tumor Histopathology

1
1. scibot 19 Dec 2025
  
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  RRID:SCR_018536
  
  DOI: 10.1158/0008-5472.CAN-25-4350
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12704547/
www.sciencedirect.com:5037 www.sciencedirect.com:5037

Digital twins for in vivo metabolic flux estimations in patients with brain cancer

1
1. scibot 04 Dec 2025
  
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  RRID:SCR_018536
  
  DOI: 10.1016/j.cmet.2025.10.022
  
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sciencedirect.com:5037/science/article/pii/S1550413125004826
Nov 2025
www.sciencedirect.com:5037 www.sciencedirect.com:5037

Protein model building for intermediate-resolution cryo-EM maps by integrating evolutionary and experimental information

1
1. scibot 29 Nov 2025
  
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  RRID:SCR_018536
  
  DOI: 10.1016/j.str.2025.11.004
  
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sciencedirect.com:5037/science/article/pii/S0969212625004381
Sep 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Deep learning algorithms from histopathological images... : International Journal of Surgery

1
1. scibot 20 Sep 2025
  
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  RRID:SCR_018536
  
  DOI: 10.1097/JS9.0000000000002667
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12430884/
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Orexin population activity precisely reflects net body movement across behavioral and metabolic states

1
1. scibot 07 Sep 2025
  
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  RRID:SCR_018536
  
  DOI: 10.7554/eLife.103738
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12393882/
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

GPSai: A Clinically Validated AI Tool for Tissue of Origin Prediction During Routine Tumor Profiling

1
1. scibot 05 Sep 2025
  
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  RRID:SCR_018536
  
  DOI: 10.1158/2767-9764.CRC-25-0171
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12399951/
Aug 2025
www.sciencedirect.com www.sciencedirect.com

AI-driven multimodal algorithm predicts immunotherapy and targeted therapy outcomes in clear cell renal cell carcinoma

1
1. scibot 20 Aug 2025
  
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  RRID:SCR_018536
  
  DOI: 10.1016/j.xcrm.2025.102299
  
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sciencedirect.com/science/article/pii/S2666379125003726
Jul 2025
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SeaMoon: From protein language models to continuous structural heterogeneity

1
1. scibot 19 Jul 2025
  
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  RRID:SCR_018536
  
  DOI: 10.1016/j.str.2025.06.010
  
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sciencedirect.com/science/article/pii/S0969212625002448
www.nature.com www.nature.com

Practical intelligent diagnostic algorithm for wearable 12-lead ECG via self-supervised learning on large-scale dataset

1
1. scibot 17 Jul 2025
  
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  Pytorch
  
  DOI: 10.1038/s41467-023-39472-8
  
  Resource: PyTorch (RRID:SCR_018536)
  
  Curator: @areedewitt04
  
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nature.com/articles/s41467-023-39472-8
elifesciences.org elifesciences.org

CHROMAS: A Computational Pipeline to Track Chromatophores and Analyze their Dynamics

1
1. scibot 10 Jul 2025
  
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  PyTorch
  
  DOI: 10.7554/eLife.106509.1
  
  Resource: PyTorch (RRID:SCR_018536)
  
  Curator: @areedewitt04
  
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elifesciences.org/reviewed-preprints/106509v1
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

AI-assisted Diagnosis of Nonmelanoma Skin Cancer in Resource-Limited Settings

1
1. scibot 04 Jul 2025
  
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  SCR_018536)
  
  DOI: 10.1158/1055-9965.EPI-25-0132
  
  Resource: PyTorch (RRID:SCR_018536)
  
  Curator: @sonofthor
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12209823/
Jun 2025
www.sciencedirect.com www.sciencedirect.com

Enhancing 3D dopamine transporter imaging as a biomarker for Parkinson’s disease via self-supervised learning with diffusion models

1
1. scibot 28 Jun 2025
  
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  RRID:SCR_018536
  
  DOI: 10.1016/j.xcrm.2025.102207
  
  Resource: PyTorch (RRID:SCR_018536)
  
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sciencedirect.com/science/article/pii/S2666379125002800
www.sciencedirect.com www.sciencedirect.com

Functional assessment of all ATM SNVs using prime editing and deep learning

1
1. scibot 28 Jun 2025
  
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  RRID:SCR_018536
  
  DOI: 10.1016/j.cell.2025.05.046
  
  Resource: PyTorch (RRID:SCR_018536)
  
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sciencedirect.com/science/article/pii/S0092867425006348
www.scienceopen.com www.scienceopen.com

A Computer Vision-Enabled Smart Healthcare and Assistive Technology Framework for Urban Digital Environments to Support Elderly Individuals and People with Disabilities

1
1. scibot 25 Jun 2025
  
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  RRID:SCR_018536
  
  DOI: 10.57197/JDR-2025-0620
  
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scienceopen.com/hosted-document
elifesciences.org elifesciences.org

Exploring the repository of de novo designed bifunctional antimicrobial peptides through deep learning

1
1. scibot 11 Jun 2025
  
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  PyTorch
  
  DOI: 10.7554/eLife.97330.2
  
  Resource: PyTorch (RRID:SCR_018536)
  
  Curator: @areedewitt04
  
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elifesciences.org/reviewed-preprints/97330v2
May 2025
www.sciencedirect.com www.sciencedirect.com

MMRNet: Ensemble deep learning models for predicting mismatch repair deficiency in endometrial cancer from histopathological images

1
1. scibot 19 May 2025
  
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  RRID:SCR_018536
  
  DOI: 10.1016/j.xcrm.2025.102099
  
  Resource: PyTorch (RRID:SCR_018536)
  
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sciencedirect.com/science/article/pii/S2666379125001727
elifesciences.org elifesciences.org

Exploring the repository of de novo-designed bifunctional antimicrobial peptides through deep learning

1
1. scibot 17 May 2025
  
  in Public
  
  PyTorch
  
  DOI: 10.7554/eLife.97330
  
  Resource: PyTorch (RRID:SCR_018536)
  
  Curator: @areedewitt04
  
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elifesciences.org/articles/97330
Feb 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Artificial intelligence algorithm for preoperative prediction of FIGO stage in ovarian cancer based on clinical features integrated 18F-FDG PET/CT metabolic and radiomics features

1
1. scibot 26 Feb 2025
  
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  RRID:SCR_018110
  
  DOI: 10.1007/s00432-025-06134-9
  
  Resource: None
  
  Curator: @evieth
  
  SciCrunch record: RRID:SCR_018536
  
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  RRID:SCR_018536 RRIDCUR:Unresolved
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pmc.ncbi.nlm.nih.gov/articles/PMC11842498/
www.cell.com www.cell.com

Slow cortical dynamics generate context processing and novelty detection

1
1. scibot 14 Feb 2025
  
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  RRID:SCR_018536
  
  DOI: 10.1016/j.neuron.2025.01.011
  
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cell.com/neuron/abstract/S0896-6273(25)00037-6
Sep 2024
www.sciencedirect.com www.sciencedirect.com

Spatial and Temporal Attention Embedded Spatial Temporal Graph Convolutional Networks for Skeleton Based Gait Recognition with Multiple IMUs

1
1. scibot 25 Sep 2024
  
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  RRID:SCR_018536
  
  DOI: 10.1016/j.isci.2024.110646
  
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sciencedirect.com/science/article/pii/S2589004224018716
www.sciencedirect.com www.sciencedirect.com

Reconstruction of patient-specific confounders in AI-based radiologic image interpretation using generative pretraining

1
1. scibot 06 Sep 2024
  
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  RRID:SCR_018536
  
  DOI: 10.1016/j.xcrm.2024.101713
  
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sciencedirect.com/science/article/pii/S2666379124004348
Jul 2024
www.sciencedirect.com www.sciencedirect.com

Machine learning on longitudinal multi-modal data enables the understanding and prognosis of Alzheimer’s disease progression

1
1. scibot 19 Jul 2024
  
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  RRID:SCR_018536
  
  DOI: 10.1016/j.isci.2024.110263
  
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sciencedirect.com/science/article/pii/S2589004224014883
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Machine Learning Inspired Nanowire Classification Method based on Nanowire Array Scanning Electron Microscope Images

1
1. scibot 04 Jul 2024
  
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  RRID:SCR_018536
  
  DOI: 10.12688/openreseurope.16696.2
  
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ncbi.nlm.nih.gov/pmc/articles/PMC11217720/
Jun 2024
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Deep-Learning Model for Tumor-Type Prediction Using Targeted Clinical Genomic Sequencing Data

2
1. scibot 07 Jun 2024
  
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  RRID:SCR_018536
  
  DOI: 10.1158/2159-8290.CD-23-0996
  
  Resource: PyTorch (RRID:SCR_018536)
  
  Curator: @scibot
  
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2. scibot 07 Jun 2024
  
  in Public
  
  RRID:SCR_018536
  
  DOI: 10.1158/2159-8290.CD-23-0996
  
  Resource: PyTorch (RRID:SCR_018536)
  
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ncbi.nlm.nih.gov/pmc/articles/PMC11145170/
May 2024
www.cell.com www.cell.com

Analysis of 3D pathology samples using weakly supervised AI

1
1. scibot 10 May 2024
  
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  RRID:SCR_018536
  
  DOI: 10.1016/j.cell.2024.03.035
  
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cell.com/cell/fulltext/S0092-8674(24)00351-9
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

VitTCR: A deep learning method for peptide recognition prediction

1
1. scibot 09 May 2024
  
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  RRID:SCR_018536
  
  DOI: 10.1016/j.isci.2024.109770
  
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ncbi.nlm.nih.gov/pmc/articles/PMC11070698/
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

An open-source natural language processing toolkit to support software development: addressing automatic bug detection, code summarisation and code search

1
1. scibot 01 May 2024
  
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  RRID:SCR_018536
  
  DOI: 10.12688/openreseurope.14507.2
  
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ncbi.nlm.nih.gov/pmc/articles/PMC11036033/
Apr 2024
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Large-scale genomic survey with deep learning-based method reveals strain-level phage specificity determinants

1
1. scibot 24 Apr 2024
  
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  RRID:SCR_018536
  
  DOI: 10.1093/gigascience/giae017
  
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ncbi.nlm.nih.gov/pmc/articles/PMC11034027/
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Modeling non-genetic information dynamics in cells using reservoir computing

1
1. scibot 20 Apr 2024
  
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  RRID:SCR_018536
  
  DOI: 10.1016/j.isci.2024.109614
  
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ncbi.nlm.nih.gov/pmc/articles/PMC11022048/
Mar 2024
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Highly accurate diagnosis of pancreatic cancer by integrative modeling using gut microbiome and exposome data

1
1. scibot 09 Mar 2024
  
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  RRID:SCR_018536
  
  DOI: 10.1016/j.isci.2024.109294
  
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ncbi.nlm.nih.gov/pmc/articles/PMC10915599/
www.sciencedirect.com www.sciencedirect.com

Deep learning reveals what facial expressions mean to people in different cultures

3
1. scibot 07 Mar 2024
  
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  RRID:SCR_018536
  
  DOI: 10.1016/j.isci.2024.109175
  
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  Curator: @scibot
  
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  RRID:SCR_018536
2. scibot 07 Mar 2024
  
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  RRID:SCR_018536
  
  DOI: 10.1016/j.isci.2024.109175
  
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  Curator: @scibot
  
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3. scibot 06 Mar 2024
  
  in Public
  
  RRID:SCR_018536
  
  DOI: 10.1016/j.isci.2024.109175
  
  Resource: PyTorch (RRID:SCR_018536)
  
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sciencedirect.com/science/article/pii/S2589004224003961
Jan 2024
www.sciencedirect.com www.sciencedirect.com

Deep learning enhanced the diagnostic merit of serum glycome for multiple cancers

1
1. scibot 12 Jan 2024
  
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  RRID:SCR_018536
  
  DOI: 10.1016/j.isci.2023.108715
  
  Resource: PyTorch (RRID:SCR_018536)
  
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sciencedirect.com/science/article/pii/S258900422302792X
Dec 2023
www.sciencedirect.com www.sciencedirect.com

Automated graptolite identification at high taxonomic resolution using residual networks

1
1. scibot 21 Dec 2023
  
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  RRID:SCR_018536
  
  DOI: 10.1016/j.isci.2023.108549
  
  Resource: PyTorch (RRID:SCR_018536)
  
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sciencedirect.com/science/article/pii/S2589004223026263
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Cross-linking breast tumor transcriptomic states and tissue histology

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  DOI: 10.1016/j.xcrm.2023.101313
  
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Nov 2023
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Bodies in motion: Unraveling the distinct roles of motion and shape in dynamic body responses in the temporal cortex

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  DOI: 10.1016/j.celrep.2023.113438
  
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Imputation method for single-cell RNA-seq data using neural topic model

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  DOI: 10.1093/gigascience/giad098
  
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Sep 2023
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Deep Learning Model for Tumor Type Prediction using Targeted Clinical Genomic Sequencing Data

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  DOI: 10.1101/2023.09.08.23295131
  
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Aug 2023
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Deep learning for risk-based stratification of cognitively impaired individuals

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  DOI: 10.1016/j.isci.2023.107522
  
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Jul 2023
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Machine learning for cryosection pathology predicts the 2021 WHO classification of glioma

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  DOI: 10.1016/j.medj.2023.06.002
  
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Jun 2023
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Convolutional neural networks for real-time wood plank detection and defect segmentation

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  DOI: 10.12688/f1000research.131905.1
  
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Neuro-inspired continual anthropomorphic grasping

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  DOI: 10.1016/j.isci.2023.106735
  
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May 2023
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On the benefits of self-taught learning for brain decoding

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  DOI: 10.1093/gigascience/giad029
  
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Apr 2023
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Systematic comparison of multi-omics survival models reveals a widespread lack of noise resistance

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  DOI: 10.1016/j.crmeth.2023.100461
  
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Feb 2023
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Variability in training unlocks generalization in visual perceptual learning through invariant representations

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  DOI: 10.1016/j.cub.2023.01.011
  
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Dec 2022
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Scratch-AID, a deep learning-based system for automatic detection of mouse scratching behavior with high accuracy

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  DOI: 10.7554/eLife.84042
  
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Disease classification for whole-blood DNA methylation: Meta-analysis, missing values imputation, and XAI

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  DOI: 10.1093/gigascience/giac097
  
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Decoding social decisions from movement kinematics

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  DOI: 10.1016/j.isci.2022.105550
  
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Aug 2022
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A data-driven machine learning approach for brain-computer interfaces targeting lower limb neuroprosthetics

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  DOI: 10.3389/fnhum.2022.949224
  
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Automated quantification of cartilage quality for hip treatment decision support

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  DOI: 10.1007/s11548-022-02714-z
  
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Pan-cancer integrative histology-genomic analysis via multimodal deep learning

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  DOI: 10.1016/j.ccell.2022.07.004
  
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Feb 2022
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Orthogonal representations for robust context-dependent task performance in brains and neural networks

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  DOI: 10.1016/j.neuron.2022.01.005
  
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cell.com/neuron/fulltext/S0896-6273(22)00005-8
Sep 2021
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Brain hierarchy score: Which deep neural networks are hierarchically brain-like?

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  DOI: 10.1016/j.isci.2021.103013
  
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May 2021
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Deep learning super‐resolution electron microscopy based on deep residual attention network

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  DOI: 10.1002/ima.22588
  
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NeuroCrypt: Machine Learning Over Encrypted Distributed Neuroimaging Data

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  DOI: 10.1007/s12021-021-09525-8
  
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Neural state space alignment for magnitude generalization in humans and recurrent networks

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  DOI: 10.1016/j.neuron.2021.02.004
  
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