63 Matching Annotations
  1. Last 7 days
  2. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Near telomere-to-telomere genome assembly of Mongolian cattle: implications for population genetic variation and beef quality
    1
    1. scibot 21 Dec 2024
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giae099

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    pmc.ncbi.nlm.nih.gov/articles/PMC11653892/
  3. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The chromosome-level genome assembly of an endangered herb Bergenia scopulosa provides insights into local adaptation and genomic vulnerability under climate change
    1
    1. scibot 21 Dec 2024
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giae091

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    pmc.ncbi.nlm.nih.gov/articles/PMC11604060/
  4. Dec 2024
  5. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The telomere-to-telomere (T2T) genome provides insights into the evolution of specialized centromere sequences in sandalwood
    1
    1. scibot 13 Dec 2024
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giae096

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    pmc.ncbi.nlm.nih.gov/articles/PMC11633456/
  6. dx.doi.org dx.doi.org
    A first look at the genome structure of hexaploid “Mitcham” peppermint (Mentha × piperita L.)
    1
    1. scibot 13 Dec 2024
      RRID:SCR_021069

      DOI: 10.1093/g3journal/jkae195

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    dx.doi.org/10.1093/g3journal/jkae195
  7. Nov 2024
  8. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Chromosome-level genome assembly and annotation of the crested gecko, Correlophus ciliatus, a lizard incapable of tail regeneration
    1
    1. scibot 17 Nov 2024
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      DOI: 10.46471/gigabyte.140

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    pmc.ncbi.nlm.nih.gov/articles/PMC11558660/
  9. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Advancing apple genetics research: Malus coronaria and Malus ioensis genomes and a gene family-based pangenome of native North American apples
    1
    1. scibot 07 Nov 2024
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      DOI: 10.1093/dnares/dsae026

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    pmc.ncbi.nlm.nih.gov/articles/PMC11489038/
  10. Sep 2024
  11. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    High-speed whole-genome sequencing of a Whippet: Rapid chromosome-level assembly and annotation of an extremely fast dog’s genome
    1
    1. scibot 26 Sep 2024
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      DOI: 10.46471/gigabyte.134

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    ncbi.nlm.nih.gov/pmc/articles/PMC11418881/
  12. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A reference genome, mitochondrial genome and associated transcriptomes for the critically endangered swift parrot ( Lathamus discolor)
    1
    1. scibot 25 Sep 2024
      RRID:SCR_021069

      DOI: 10.12688/f1000research.144352.2

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    ncbi.nlm.nih.gov/pmc/articles/PMC11411239/
  13. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Telomere-to-telomere gap-free genome assembly of the endangered Yangtze finless porpoise and East Asian finless porpoise
    1
    1. scibot 18 Sep 2024
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      DOI: 10.1093/gigascience/giae067

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    ncbi.nlm.nih.gov/pmc/articles/PMC11403816/
  14. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Disentangling river and swamp buffalo genetic diversity: initial insights from the 1000 Buffalo Genomes Project
    1
    1. scibot 12 Sep 2024
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      DOI: 10.1093/gigascience/giae053

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    ncbi.nlm.nih.gov/pmc/articles/PMC11382405/
  15. Aug 2024
  16. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genomes of 5 underutilized Papilionoideae crops provide insights into root nodulation and disease resistance
    1
    1. scibot 29 Aug 2024
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      DOI: 10.1093/gigascience/giae063

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    ncbi.nlm.nih.gov/pmc/articles/PMC11348429/
  17. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A trade-off in evolution: the adaptive landscape of spiders without venom glands
    1
    1. scibot 19 Aug 2024
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      DOI: 10.1093/gigascience/giae048

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    ncbi.nlm.nih.gov/pmc/articles/PMC11299198/
  18. Jul 2024
  19. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosomal-level genome assembly and single-nucleotide polymorphism sites of black-faced spoonbill Platalea minor
    1
    1. scibot 31 Jul 2024
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      DOI: 10.46471/gigabyte.130

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    ncbi.nlm.nih.gov/pmc/articles/PMC11273517/
  20. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    De-novo long-read genome assembly and annotation of the luna moth (Actias luna) fully resolves repeat-rich silk genes
    1
    1. scibot 24 Jul 2024
      RRID:SCR_021069

      DOI: 10.1093/gbe/evae148

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    ncbi.nlm.nih.gov/pmc/articles/PMC11258402/
  21. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Exploring the cobia (Rachycentron canadum) genome: unveiling putative male heterogametic regions and identification of sex-specific markers
    1
    1. scibot 17 Jul 2024
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giae034

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    ncbi.nlm.nih.gov/pmc/articles/PMC11240236/
  22. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Gapless genome assembly and epigenetic profiles reveal gene regulation of whole-genome triplication in lettuce
    1
    1. scibot 14 Jul 2024
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giae043

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    ncbi.nlm.nih.gov/pmc/articles/PMC11238431/
  23. Jun 2024
  24. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genomes of Dahlia pinnata, Cosmos bipinnatus, and Bidens alba in tribe Coreopsideae provide insights into polyploid evolution and inulin biosynthesis
    1
    1. scibot 22 Jun 2024
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giae032

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    ncbi.nlm.nih.gov/pmc/articles/PMC11170221/
  25. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The telomere-to-telomere (T2T) genome of Peucedanum praeruptorum Dunn provides insights into the genome evolution and coumarin biosynthesis
    1
    1. scibot 08 Jun 2024
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giae025

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    ncbi.nlm.nih.gov/pmc/articles/PMC11152176/
  26. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic decoding of Theobroma grandiflorum (cupuassu) at chromosomal scale: evolutionary insights for horticultural innovation
    1
    1. scibot 08 Jun 2024
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giae027

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    ncbi.nlm.nih.gov/pmc/articles/PMC11152179/
  27. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A long-read draft assembly of the Chinese mantis (Mantodea: Mantidae: Tenodera sinensis) genome reveals patterns of ion channel gain and loss across Arthropoda
    1
    1. scibot 08 Jun 2024
      RRID:SCR_021069

      DOI: 10.1093/g3journal/jkae062

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    ncbi.nlm.nih.gov/pmc/articles/PMC11152070/
  28. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A haplotype-resolved chromosome-level assembly and annotation of European hazelnut (C. avellana cv. Jefferson) provides insight into mechanisms of eastern filbert blight resistance
    1
    1. scibot 08 Jun 2024
      RRID:SCR_021069

      DOI: 10.1093/g3journal/jkae021

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    ncbi.nlm.nih.gov/pmc/articles/PMC11152071/
  29. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the rare and endangered Grantham’s camellia, Camellia granthamiana
    1
    1. scibot 02 Jun 2024
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      DOI: 10.46471/gigabyte.124

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    ncbi.nlm.nih.gov/pmc/articles/PMC11131091/
  30. May 2024
  31. www.sciencedirect.com www.sciencedirect.com
    Reciprocal conversion between annual and polycarpic perennial flowering behavior in the Brassicaceae
    3
    1. scibot 30 May 2024
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      DOI: 10.1016/j.cell.2024.04.047

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    2. scibot 30 May 2024
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      DOI: 10.1016/j.cell.2024.04.047

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    3. scibot 30 May 2024
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      DOI: 10.1016/j.cell.2024.04.047

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    sciencedirect.com/science/article/pii/S0092867424004732
  32. www.biorxiv.org www.biorxiv.org
    A first look at the genome structure of hexaploid ‘Black Mitcham’ peppermint (Mentha piperita L.)
    2
    1. scibot 29 May 2024
      RRID:SCR_0121069

      DOI: 10.1101/2024.03.15.585188

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    2. scibot 29 May 2024
      RRID:SCR_0121069

      DOI: 10.1101/2024.03.15.585188

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    biorxiv.org/content/10.1101/2024.03.15.585188v1
  33. www.biorxiv.org www.biorxiv.org
    Advancing apple genetics research: Malus coronaria and Malus ioensis genomes and a gene family-based pangenome of native North American apples
    1
    1. scibot 23 May 2024
      RRID:SCR_021069

      DOI: 10.1101/2024.05.13.593769

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    biorxiv.org/content/10.1101/2024.05.13.593769v1
  34. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosomal-level genome assembly of the long-spined sea urchin Diadema setosum (Leske, 1778)
    1
    1. scibot 08 May 2024
      RRID:SCR_021069

      DOI: 10.46471/gigabyte.121

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    ncbi.nlm.nih.gov/pmc/articles/PMC11066563/
  35. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosomal-level genome assembly of golden birdwing Troides aeacus (Felder & Felder, 1860)
    1
    1. scibot 08 May 2024
      RRID:SCR_021069

      DOI: 10.46471/gigabyte.122

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    ncbi.nlm.nih.gov/pmc/articles/PMC11068028/
  36. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of the common chiton, Liolophura japonica (Lischke, 1873)
    1
    1. scibot 08 May 2024
      RRID:SCR_021069

      DOI: 10.46471/gigabyte.123

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    ncbi.nlm.nih.gov/pmc/articles/PMC11068029/
  37. Mar 2024
  38. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A reference genome of Commelinales provides insights into the commelinids evolution and global spread of water hyacinth (Pontederia crassipes)
    1
    1. scibot 16 Mar 2024
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giae006

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    ncbi.nlm.nih.gov/pmc/articles/PMC10938897/
  39. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome of the poultry shaft louse Menopon gallinae provides insight into the host-switching and adaptive evolution of parasitic lice
    1
    1. scibot 03 Mar 2024
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giae004

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    ncbi.nlm.nih.gov/pmc/articles/PMC10904027/
  40. Feb 2024
  41. dx.doi.org dx.doi.org
    Long read genome assembly of Automeris io (Lepidoptera: Saturniidae) an emerging model for the evolution of deimatic displays
    1
    1. scibot 08 Feb 2024
      RRID:SCR_021069

      DOI: 10.1093/g3journal/jkad292

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    dx.doi.org/10.1093/g3journal/jkad292
  42. Jan 2024
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptation
    1
    1. scibot 05 Jan 2024
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giad107

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    ncbi.nlm.nih.gov/pmc/articles/PMC10764150/
  44. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level phased genome assembly of ‘Antonovka’ identified candidate apple scab resistance genes highly homologous to HcrVf2 and HcrVf1 on linkage group 1
    1
    1. scibot 05 Jan 2024
      RRID:SCR_021069

      DOI: 10.1093/g3journal/jkad253

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    ncbi.nlm.nih.gov/pmc/articles/PMC10755186/
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Evolutionary genomics of three agricultural pest moths reveals rapid evolution of host adaptation and immune-related genes
    1
    1. scibot 05 Jan 2024
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giad103

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    ncbi.nlm.nih.gov/pmc/articles/PMC10759296/
  46. Dec 2023
  47. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality pseudo-phased genome for Melaleuca quinquenervia shows allelic diversity of NLR-type resistance genes
    1
    1. scibot 16 Dec 2023
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giad102

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    ncbi.nlm.nih.gov/pmc/articles/PMC10720953/
  48. www.biorxiv.org www.biorxiv.org
    A long-read draft assembly of the Chinese mantis (Mantodea: Mantidae: Tenodera sinensis) genome reveals patterns of ion channel gain and loss across Arthropoda
    1
    1. scibot 01 Dec 2023
      RRID:SCR_021069

      DOI: 10.1101/2023.11.15.567226

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    biorxiv.org/content/10.1101/2023.11.15.567226v1
  49. Oct 2023
  50. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level assembly supports genome-wide investigation of the DMRT gene family in the golden mussel (Limnoperna fortunei)
    1
    1. scibot 05 Oct 2023
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      DOI: 10.1093/gigascience/giad072

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    ncbi.nlm.nih.gov/pmc/articles/PMC10541798/
  51. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level reference genome of tetraploid Isoetes sinensis provides insights into evolution and adaption of lycophytes
    1
    1. scibot 05 Oct 2023
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giad079

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    ncbi.nlm.nih.gov/pmc/articles/PMC10541799/
  52. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Construction and analysis of the chromosome-level haplotype-resolved genomes of two Crassostrea oyster congeners: Crassostrea angulata and Crassostrea gigas
    1
    1. scibot 05 Oct 2023
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giad077

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    ncbi.nlm.nih.gov/pmc/articles/PMC10546077/
  53. Sep 2023
  54. www.biorxiv.org www.biorxiv.org
    A haplotype-resolved chromosome-level assembly and annotation of European hazelnut (C. avellana cv. Jefferson) provides insight into mechanisms of eastern filbert blight resistance
    1
    1. scibot 30 Sep 2023
      RRID:SCR_021069

      DOI: 10.1101/2023.09.21.558899

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    biorxiv.org/content/10.1101/2023.09.21.558899v1
  55. Jul 2023
  56. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Identification of sex chromosomes and primary sex ratio in the small hive beetle, a worldwide parasite of honey bees
    1
    1. scibot 27 Jul 2023
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giad056

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    ncbi.nlm.nih.gov/pmc/articles/PMC10367126/
  57. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the hybrid grapevine Vitis ‘Chambourcin’
    1
    1. scibot 06 Jul 2023
      RRID:SCR_021069

      DOI: 10.46471/gigabyte.84

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    ncbi.nlm.nih.gov/pmc/articles/PMC10318349/
  58. May 2023
  59. academic.oup.com academic.oup.com
    A high-quality, long-read genome assembly of the whitelined sphinx moth (Lepidoptera: Sphingidae: Hyles lineata) shows highly conserved melanin synthesis pathway genes
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    1. scibot 06 May 2023
      RRID:SCR_021069

      DOI: 10.1093/g3journal/jkad090

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    academic.oup.com/g3journal/advance-article/doi/10.1093/g3journal/jkad090/7147210
  60. Mar 2023
  61. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Improvements to the Gulf pipefish Syngnathus scovelli genome
    1
    1. scibot 29 Mar 2023
      RRID:SCR_021069

      DOI: 10.46471/gigabyte.76

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    ncbi.nlm.nih.gov/pmc/articles/PMC10038202/
  62. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A phased, chromosome-scale genome of ‘Honeycrisp’ apple (Malus domestica)
    1
    1. scibot 02 Mar 2023
      RRID:SCR_021069

      DOI: 10.46471/gigabyte.69

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    ncbi.nlm.nih.gov/pmc/articles/PMC9693968/
  63. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Improvements in the sequencing and assembly of plant genomes
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    1. scibot 02 Mar 2023
      RRID:SCR_021069

      DOI: 10.46471/gigabyte.24

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    ncbi.nlm.nih.gov/pmc/articles/PMC9631998/
  64. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A genome assembly of the Atlantic chub mackerel (Scomber colias): a valuable teleost fishing resource
    1
    1. scibot 02 Mar 2023
      RRID:SCR_021069

      DOI: 10.46471/gigabyte.40

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650269/
  65. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Long-read HiFi sequencing correctly assembles repetitive heavy fibroin silk genes in new moth and caddisfly genomes
    1
    1. scibot 02 Mar 2023
      RRID:SCR_021069

      DOI: 10.46471/gigabyte.64

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    ncbi.nlm.nih.gov/pmc/articles/PMC9693786/
  66. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level genome assembly and annotation of the maize elite breeding line Dan340
    1
    1. scibot 02 Mar 2023
      RRID:SCR_021069

      DOI: 10.46471/gigabyte.63

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    ncbi.nlm.nih.gov/pmc/articles/PMC9694154/
  67. Feb 2023
  68. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of Musa beccarii shows extensive chromosomal rearrangements and genome expansion during evolution of Musaceae genomes
    1
    1. scibot 23 Feb 2023
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giad005

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    ncbi.nlm.nih.gov/pmc/articles/PMC9941839/
  69. www.sciencedirect.com www.sciencedirect.com
    A chromosome-level genome assembly of Ostrea denselamellosa provides initial insights into its evolution
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    1. scibot 16 Feb 2023
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      DOI: 10.1016/j.ygeno.2023.110582

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    sciencedirect.com/science/article/pii/S0888754323000265
  70. Nov 2022
  71. academic.oup.com academic.oup.com
    Capparis spinosa var. herbacea genome provides the first genomic instrument for a diversity and evolution study of the Capparaceae family
    1
    1. scibot 03 Nov 2022
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giac106

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac106/6780308
  72. Oct 2022
  73. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly for the Aldabra giant tortoise enables insights into the genetic health of a threatened population
    1
    1. scibot 26 Oct 2022
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giac090

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    ncbi.nlm.nih.gov/pmc/articles/PMC9553416/
  74. Jul 2022
  75. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level assembly and annotation of the blue catfish Ictalurus furcatus, an aquaculture species for hybrid catfish reproduction, epigenetics, and heterosis studies
    1
    1. scibot 14 Jul 2022
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giac070

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    ncbi.nlm.nih.gov/pmc/articles/PMC9270728/
  76. academic.oup.com academic.oup.com
    Manchurian Walnut Genome: Insights into Juglone and Lipid Biosynthesis
    1
    1. scibot 06 Jul 2022
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giac057

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac057/6619298
  77. Jun 2022
  78. academic.oup.com academic.oup.com
    Genomes and demographic histories of the endangered Bretschneidera sinensis (Akaniaceae)
    1
    1. scibot 17 Jun 2022
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giac050

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac050/6608505
  79. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genetic polyploid phasing from low-depth progeny samples
    1
    1. scibot 15 Jun 2022
      RRID:SCR_021069

      DOI: 10.1016/j.isci.2022.104461

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    ncbi.nlm.nih.gov/pmc/articles/PMC9184567/
  80. Apr 2022
  81. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome of the globe skimmer dragonfly (Pantala flavescens)
    1
    1. scibot 07 Apr 2022
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giac009

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    ncbi.nlm.nih.gov/pmc/articles/PMC8978299/
  82. Mar 2022
  83. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The haplotype-resolved chromosome pairs of a heterozygous diploid African cassava cultivar reveal novel pan-genome and allele-specific transcriptome features
    1
    1. scibot 31 Mar 2022
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giac028

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    ncbi.nlm.nih.gov/pmc/articles/PMC8952263/
  84. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    KOREF_S1: phased, parental trio-binned Korean reference genome using long reads and Hi-C sequencing methods
    1
    1. scibot 31 Mar 2022
      RRID:SCR_021069

      DOI: 10.1093/gigascience/giac022

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    ncbi.nlm.nih.gov/pmc/articles/PMC8952264/