90 Matching Annotations
  1. Last 7 days
  2. www.biorxiv.org www.biorxiv.org
    A de novo reference genome of the golden jackal, Canis aureus
    1
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    biorxiv.org/content/10.1101/2025.10.09.681322v2
  3. Oct 2025
  4. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The complete genome assembly of Astragalus membranaceus: enabling more accurate genetic research
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12486382/
  5. Sep 2025
  6. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A telomere-to-telomere genome assembly of koi carp (Cyprinus carpio) using long reads and Hi-C technology
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12395963/
  7. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A comprehensive water buffalo pangenome reveals extensive structural variation linked to population-specific signatures of selection
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12398277/
  8. Aug 2025
  9. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A near telomere-to-telomere phased genome assembly and annotation for the Australian central bearded dragon Pogona vitticeps
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12360841/
  10. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Telomere-to-telomere African wild rice (Oryza longistaminata) reference genome reveals segmental and structural variation
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12360840/
  11. Jul 2025
  12. academic.oup.com academic.oup.com
    Telomere-to-telomere chromosome-scale genome assemblies of black and golden koi carp variants support construction of an ancient karyotype of Cypriniformes
    1
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giaf073/8213833
  13. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The telomere-to-telomere gap-free reference genome and taxonomic reassessment of Siniperca roulei
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12263216/
  14. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A telomere-to-telomere gapless genome reveals SlPRR1 control of circadian rhythm and photoperiodic flowering in tomato
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12218202/
  15. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The genome of Hippophae salicifolia provides new insights into the sexual differentiation of sea buckthorn
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12218201/
  16. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The telomere-to-telomere gapless genome of grass carp provides insights for genetic improvement
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12204074/
  17. Jun 2025
  18. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of the lemon sole, Microstomus kitt (Pleuronectiformes: Pleuronectidae)
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12135936/
  19. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Chromosome-level reference genome for the medically important Arabian horned viper (Cerastes gasperettii)
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12143202/
  20. May 2025
  21. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A near telomere-to-telomere genome assembly of the Jinhua pig: enabling more accurate genetic research
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12080228/
  22. dx.doi.org dx.doi.org
    Telomere-to-telomere genome of common bean (Phaseolus vulgaris L., YP4)
    1
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    dx.doi.org/10.1093/gigascience/giaf001
  23. Apr 2025
  24. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Genome assembly and annotation of Acropora pulchra from Mo’orea French Polynesia
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11985253/
  25. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Phased high-quality genome of the gymnosperm Himalayan Yew assists in paclitaxel pathway exploration
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11970372/
  26. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Telomere-to-telomere genome assembly of Electrophorus electricus provides insights into the evolution of electric eels
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11959694/
  27. Mar 2025
  28. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Genomic and transcriptomic analyses of Heteropoda venatoria reveal the expansion of P450 family for starvation resistance in spiders
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11927401/
  29. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A telomere-to-telomere phased genome of an octoploid strawberry reveals a receptor kinase conferring anthracnose resistance
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11899574/
  30. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The assembly and annotation of two teinturier grapevine varieties, Dakapo and Rubired
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11891882/
  31. Feb 2025
  32. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The telomere-to-telomere genome of flowering cherry (Prunus campanulata) reveals genomic evolution of the subgenus Cerasus
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11843098/
  33. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Enhancing inbreeding estimation and global conservation insights through chromosome-level assemblies of the Chinese and Malayan pangolin
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11825179/
  34. Jan 2025
  35. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Genomes reveal pervasive distant hybridization in nature among cyprinid fishes
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11779505/
  36. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A chromosome-level, haplotype-resolved genome assembly and annotation for the Eurasian minnow (Leuciscidae: Phoxinus phoxinus) provide evidence of haplotype diversity
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11775470/
  37. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Telomere-to-telomere genome and resequencing of 254 individuals reveal evolution, genomic footprints in Asian icefish, Protosalanx chinensis
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11707609/
  38. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Polyploid genome assembly of Cardamine chenopodiifolia
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11693932/
  39. Dec 2024
  40. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Near telomere-to-telomere genome assembly of Mongolian cattle: implications for population genetic variation and beef quality
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11653892/
  41. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The chromosome-level genome assembly of an endangered herb Bergenia scopulosa provides insights into local adaptation and genomic vulnerability under climate change
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11604060/
  42. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The telomere-to-telomere (T2T) genome provides insights into the evolution of specialized centromere sequences in sandalwood
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11633456/
  43. dx.doi.org dx.doi.org
    A first look at the genome structure of hexaploid “Mitcham” peppermint (Mentha × piperita L.)
    1
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    dx.doi.org/10.1093/g3journal/jkae195
  44. Nov 2024
  45. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Chromosome-level genome assembly and annotation of the crested gecko, Correlophus ciliatus, a lizard incapable of tail regeneration
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11558660/
  46. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Advancing apple genetics research: Malus coronaria and Malus ioensis genomes and a gene family-based pangenome of native North American apples
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11489038/
  47. Sep 2024
  48. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    High-speed whole-genome sequencing of a Whippet: Rapid chromosome-level assembly and annotation of an extremely fast dog’s genome
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11418881/
  49. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A reference genome, mitochondrial genome and associated transcriptomes for the critically endangered swift parrot ( Lathamus discolor)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11411239/
  50. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Telomere-to-telomere gap-free genome assembly of the endangered Yangtze finless porpoise and East Asian finless porpoise
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11403816/
  51. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Disentangling river and swamp buffalo genetic diversity: initial insights from the 1000 Buffalo Genomes Project
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11382405/
  52. Aug 2024
  53. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genomes of 5 underutilized Papilionoideae crops provide insights into root nodulation and disease resistance
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11348429/
  54. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A trade-off in evolution: the adaptive landscape of spiders without venom glands
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11299198/
  55. Jul 2024
  56. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosomal-level genome assembly and single-nucleotide polymorphism sites of black-faced spoonbill Platalea minor
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11273517/
  57. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    De-novo long-read genome assembly and annotation of the luna moth (Actias luna) fully resolves repeat-rich silk genes
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11258402/
  58. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Exploring the cobia (Rachycentron canadum) genome: unveiling putative male heterogametic regions and identification of sex-specific markers
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11240236/
  59. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Gapless genome assembly and epigenetic profiles reveal gene regulation of whole-genome triplication in lettuce
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    ncbi.nlm.nih.gov/pmc/articles/PMC11238431/
  60. Jun 2024
  61. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genomes of Dahlia pinnata, Cosmos bipinnatus, and Bidens alba in tribe Coreopsideae provide insights into polyploid evolution and inulin biosynthesis
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11170221/
  62. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The telomere-to-telomere (T2T) genome of Peucedanum praeruptorum Dunn provides insights into the genome evolution and coumarin biosynthesis
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11152176/
  63. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic decoding of Theobroma grandiflorum (cupuassu) at chromosomal scale: evolutionary insights for horticultural innovation
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11152179/
  64. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A long-read draft assembly of the Chinese mantis (Mantodea: Mantidae: Tenodera sinensis) genome reveals patterns of ion channel gain and loss across Arthropoda
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11152070/
  65. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A haplotype-resolved chromosome-level assembly and annotation of European hazelnut (C. avellana cv. Jefferson) provides insight into mechanisms of eastern filbert blight resistance
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11152071/
  66. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the rare and endangered Grantham’s camellia, Camellia granthamiana
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    ncbi.nlm.nih.gov/pmc/articles/PMC11131091/
  67. May 2024
  68. www.sciencedirect.com www.sciencedirect.com
    Reciprocal conversion between annual and polycarpic perennial flowering behavior in the Brassicaceae
    3
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    sciencedirect.com/science/article/pii/S0092867424004732
  69. www.biorxiv.org www.biorxiv.org
    A first look at the genome structure of hexaploid ‘Black Mitcham’ peppermint (Mentha piperita L.)
    2
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    biorxiv.org/content/10.1101/2024.03.15.585188v1
  70. www.biorxiv.org www.biorxiv.org
    Advancing apple genetics research: Malus coronaria and Malus ioensis genomes and a gene family-based pangenome of native North American apples
    1
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    biorxiv.org/content/10.1101/2024.05.13.593769v1
  71. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosomal-level genome assembly of the long-spined sea urchin Diadema setosum (Leske, 1778)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11066563/
  72. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosomal-level genome assembly of golden birdwing Troides aeacus (Felder & Felder, 1860)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11068028/
  73. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of the common chiton, Liolophura japonica (Lischke, 1873)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11068029/
  74. Mar 2024
  75. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A reference genome of Commelinales provides insights into the commelinids evolution and global spread of water hyacinth (Pontederia crassipes)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10938897/
  76. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome of the poultry shaft louse Menopon gallinae provides insight into the host-switching and adaptive evolution of parasitic lice
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10904027/
  77. Feb 2024
  78. dx.doi.org dx.doi.org
    Long read genome assembly of Automeris io (Lepidoptera: Saturniidae) an emerging model for the evolution of deimatic displays
    1
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    dx.doi.org/10.1093/g3journal/jkad292
  79. Jan 2024
  80. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptation
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10764150/
  81. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level phased genome assembly of ‘Antonovka’ identified candidate apple scab resistance genes highly homologous to HcrVf2 and HcrVf1 on linkage group 1
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10755186/
  82. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Evolutionary genomics of three agricultural pest moths reveals rapid evolution of host adaptation and immune-related genes
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10759296/
  83. Dec 2023
  84. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality pseudo-phased genome for Melaleuca quinquenervia shows allelic diversity of NLR-type resistance genes
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10720953/
  85. www.biorxiv.org www.biorxiv.org
    A long-read draft assembly of the Chinese mantis (Mantodea: Mantidae: Tenodera sinensis) genome reveals patterns of ion channel gain and loss across Arthropoda
    1
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    biorxiv.org/content/10.1101/2023.11.15.567226v1
  86. Oct 2023
  87. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level assembly supports genome-wide investigation of the DMRT gene family in the golden mussel (Limnoperna fortunei)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10541798/
  88. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level reference genome of tetraploid Isoetes sinensis provides insights into evolution and adaption of lycophytes
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10541799/
  89. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Construction and analysis of the chromosome-level haplotype-resolved genomes of two Crassostrea oyster congeners: Crassostrea angulata and Crassostrea gigas
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10546077/
  90. Sep 2023
  91. www.biorxiv.org www.biorxiv.org
    A haplotype-resolved chromosome-level assembly and annotation of European hazelnut (C. avellana cv. Jefferson) provides insight into mechanisms of eastern filbert blight resistance
    1
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    biorxiv.org/content/10.1101/2023.09.21.558899v1
  92. Jul 2023
  93. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Identification of sex chromosomes and primary sex ratio in the small hive beetle, a worldwide parasite of honey bees
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10367126/
  94. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the hybrid grapevine Vitis ‘Chambourcin’
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10318349/
  95. May 2023
  96. academic.oup.com academic.oup.com
    A high-quality, long-read genome assembly of the whitelined sphinx moth (Lepidoptera: Sphingidae: Hyles lineata) shows highly conserved melanin synthesis pathway genes
    1
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    academic.oup.com/g3journal/advance-article/doi/10.1093/g3journal/jkad090/7147210
  97. Mar 2023
  98. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Improvements to the Gulf pipefish Syngnathus scovelli genome
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10038202/
  99. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A phased, chromosome-scale genome of ‘Honeycrisp’ apple (Malus domestica)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9693968/
  100. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Improvements in the sequencing and assembly of plant genomes
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9631998/
  101. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A genome assembly of the Atlantic chub mackerel (Scomber colias): a valuable teleost fishing resource
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650269/
  102. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Long-read HiFi sequencing correctly assembles repetitive heavy fibroin silk genes in new moth and caddisfly genomes
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9693786/
  103. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level genome assembly and annotation of the maize elite breeding line Dan340
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9694154/
  104. Feb 2023
  105. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of Musa beccarii shows extensive chromosomal rearrangements and genome expansion during evolution of Musaceae genomes
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9941839/
  106. www.sciencedirect.com www.sciencedirect.com
    A chromosome-level genome assembly of Ostrea denselamellosa provides initial insights into its evolution
    1
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    sciencedirect.com/science/article/pii/S0888754323000265
  107. Nov 2022
  108. academic.oup.com academic.oup.com
    Capparis spinosa var. herbacea genome provides the first genomic instrument for a diversity and evolution study of the Capparaceae family
    1
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac106/6780308
  109. Oct 2022
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    Chromosome-level genome assembly for the Aldabra giant tortoise enables insights into the genetic health of a threatened population
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    ncbi.nlm.nih.gov/pmc/articles/PMC9553416/
  111. Jul 2022
  112. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level assembly and annotation of the blue catfish Ictalurus furcatus, an aquaculture species for hybrid catfish reproduction, epigenetics, and heterosis studies
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    ncbi.nlm.nih.gov/pmc/articles/PMC9270728/
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    Manchurian Walnut Genome: Insights into Juglone and Lipid Biosynthesis
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac057/6619298
  114. Jun 2022
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    Genomes and demographic histories of the endangered Bretschneidera sinensis (Akaniaceae)
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac050/6608505
  116. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genetic polyploid phasing from low-depth progeny samples
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    ncbi.nlm.nih.gov/pmc/articles/PMC9184567/
  117. Apr 2022
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    Chromosome-level genome of the globe skimmer dragonfly (Pantala flavescens)
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    ncbi.nlm.nih.gov/pmc/articles/PMC8978299/
  119. Mar 2022
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    The haplotype-resolved chromosome pairs of a heterozygous diploid African cassava cultivar reveal novel pan-genome and allele-specific transcriptome features
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    ncbi.nlm.nih.gov/pmc/articles/PMC8952263/
  121. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    KOREF_S1: phased, parental trio-binned Korean reference genome using long reads and Hi-C sequencing methods
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    ncbi.nlm.nih.gov/pmc/articles/PMC8952264/