69 Matching Annotations
  1. Last 7 days
  2. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A Conserved Enhancer Locus in Extrachromosomal DNA and Homogeneously Staining Regions Activates MYC Transcription in Group 3 Medulloblastoma
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC13202998/
  3. Apr 2026
  4. www.sciencedirect.com www.sciencedirect.com
    Somatic cancer variants enriched in Alzheimer’s disease microglia-like cells drive inflammatory and proliferative states
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    sciencedirect.com/science/article/pii/S0092867426003417
  5. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Functional genomics reveals key gene families and molecular pathways for extreme cold survival in the khapra beetle
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC13032687/
  6. Mar 2026
  7. dx.doi.org dx.doi.org
    A Chromosome-Level Genome Assembly of the Snow Leopard, Panthera Uncia
    1
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    dx.doi.org/10.1093/jhered/esaf046
  8. Nov 2025
  9. www.sciencedirect.com www.sciencedirect.com
    Circadian PERIOD proteins regulate TC-DSB repair through anchoring to the nuclear envelope
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    sciencedirect.com/science/article/pii/S1097276525008688
  10. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Mapping of chromatin architecture and enhancer-promoter interactions in the cochlea
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12568336/
  11. Oct 2025
  12. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The complete genome assembly of Astragalus membranaceus: enabling more accurate genetic research
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12486382/
  13. Sep 2025
  14. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A telomere-to-telomere genome assembly of koi carp (Cyprinus carpio) using long reads and Hi-C technology
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12395963/
  15. Aug 2025
  16. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Telomere-to-telomere African wild rice (Oryza longistaminata) reference genome reveals segmental and structural variation
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12360840/
  17. Jul 2025
  18. dx.doi.org dx.doi.org
    Telomere-to-telomere chromosome-scale genome assemblies of black and golden koi carp variants support construction of an ancient karyotype of Cypriniformes
    1
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    dx.doi.org/10.1093/gigascience/giaf073
  19. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The genome of Hippophae salicifolia provides new insights into the sexual differentiation of sea buckthorn
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12218201/
  20. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The telomere-to-telomere gapless genome of grass carp provides insights for genetic improvement
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12204074/
  21. Jun 2025
  22. 52.53.155.43 52.53.155.43
    Chromosome-Level genome assembly and transcriptome analysis of the ural owl, Strix uralensis Pallas, 1771
    2
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    52.53.155.43/7dabfbbd9bff9fd118ed366d51d2c9d870afbb9e/PDF-html.html
  23. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of the lemon sole, Microstomus kitt (Pleuronectiformes: Pleuronectidae)
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12135936/
  24. May 2025
  25. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A near telomere-to-telomere genome assembly of the Jinhua pig: enabling more accurate genetic research
    2
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    pmc.ncbi.nlm.nih.gov/articles/PMC12080228/
  26. Apr 2025
  27. 52.53.155.43 52.53.155.43
    PDF-html.html
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    52.53.155.43/55258fb7cbb5129b8f6a80aa9ec7947c8b76a265/PDF-html.html
  28. Mar 2025
  29. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Hi-GDT: A Hi-C-based 3D gene domain analysis tool for analyzing local chromatin contacts in plants
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11927400/
  30. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A telomere-to-telomere phased genome of an octoploid strawberry reveals a receptor kinase conferring anthracnose resistance
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11899574/
  31. Feb 2025
  32. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The telomere-to-telomere genome of flowering cherry (Prunus campanulata) reveals genomic evolution of the subgenus Cerasus
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11843098/
  33. Jan 2025
  34. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A chromosome-scale genome assembly of the pioneer plant Stylosanthes angustifolia: insights into genome evolution and drought adaptation
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11758145/
  35. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Polyploid genome assembly of Cardamine chenopodiifolia
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11693932/
  36. Dec 2024
  37. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    De novo assembly and characterization of a highly degenerated ZW sex chromosome in the fish Megaleporinus macrocephalus
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11590113/
  38. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Construction and analysis of telomere-to-telomere genomes for 2 sweet oranges: Longhuihong and Newhall (Citrus sinensis)
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11590112/
  39. dx.doi.org dx.doi.org
    A first look at the genome structure of hexaploid “Mitcham” peppermint (Mentha × piperita L.)
    1
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    dx.doi.org/10.1093/g3journal/jkae195
  40. Nov 2024
  41. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Advancing apple genetics research: Malus coronaria and Malus ioensis genomes and a gene family-based pangenome of native North American apples
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11489038/
  42. Sep 2024
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assemblies of two littorinid marine snails indicate genetic basis of intertidal adaptation and ancient karyotype evolved from bilaterian ancestors
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11423352/
  44. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Disentangling river and swamp buffalo genetic diversity: initial insights from the 1000 Buffalo Genomes Project
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    ncbi.nlm.nih.gov/pmc/articles/PMC11382405/
  45. Aug 2024
  46. www.sciencedirect.com www.sciencedirect.com
    Members of an array of zinc-finger proteins specify distinct Hox chromatin boundaries
    1
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    sciencedirect.com/science/article/pii/S1097276524006610
  47. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A trade-off in evolution: the adaptive landscape of spiders without venom glands
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11299198/
  48. Jul 2024
  49. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Gapless genome assembly and epigenetic profiles reveal gene regulation of whole-genome triplication in lettuce
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    ncbi.nlm.nih.gov/pmc/articles/PMC11238431/
  50. Jun 2024
  51. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Exploring the role of polymorphic interspecies structural variants in reproductive isolation and adaptive divergence in Eucalyptus
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11170218/
  52. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genomes of Dahlia pinnata, Cosmos bipinnatus, and Bidens alba in tribe Coreopsideae provide insights into polyploid evolution and inulin biosynthesis
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11170221/
  53. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The telomere-to-telomere (T2T) genome of Peucedanum praeruptorum Dunn provides insights into the genome evolution and coumarin biosynthesis
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11152176/
  54. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A haplotype-resolved chromosome-level assembly and annotation of European hazelnut (C. avellana cv. Jefferson) provides insight into mechanisms of eastern filbert blight resistance
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11152071/
  55. May 2024
  56. www.sciencedirect.com www.sciencedirect.com
    Heterochromatic 3D genome organization is directed by HP1a- and H3K9-dependent and independent mechanisms
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    sciencedirect.com/science/article/pii/S1097276524003952
  57. www.biorxiv.org www.biorxiv.org
    A first look at the genome structure of hexaploid ‘Black Mitcham’ peppermint (Mentha piperita L.)
    2
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    biorxiv.org/content/10.1101/2024.03.15.585188v1
  58. www.biorxiv.org www.biorxiv.org
    Advancing apple genetics research: Malus coronaria and Malus ioensis genomes and a gene family-based pangenome of native North American apples
    1
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    biorxiv.org/content/10.1101/2024.05.13.593769v1
  59. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosomal-level genome assembly of the long-spined sea urchin Diadema setosum (Leske, 1778)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11066563/
  60. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of the common chiton, Liolophura japonica (Lischke, 1873)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11068029/
  61. Mar 2024
  62. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    An improved chromosome-level genome assembly of perennial ryegrass (Lolium perenne L.)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10940895/
  63. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome of the poultry shaft louse Menopon gallinae provides insight into the host-switching and adaptive evolution of parasitic lice
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10904027/
  64. Jan 2024
  65. dx.doi.org dx.doi.org
    The chromosome-scale genome of Magnolia sinica (Magnoliaceae) provides insights into the conservation of plant species with extremely small populations (PSESP)
    1
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    dx.doi.org/10.1093/gigascience/giad110
  66. Dec 2023
  67. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of the Pacific geoduck Panopea generosa reveals major inter- and intrachromosomal rearrangements and substantial expansion of the copine gene family
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10729735/
  68. Nov 2023
  69. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A reference assembly for the legume cover crop hairy vetch (Vicia villosa)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10659084/
  70. Oct 2023
  71. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The chromosome-level genome of Chinese praying mantis Tenodera sinensis (Mantodea: Mantidae) reveals its biology as a predator
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10600911/
  72. Sep 2023
  73. www.biorxiv.org www.biorxiv.org
    A haplotype-resolved chromosome-level assembly and annotation of European hazelnut (C. avellana cv. Jefferson) provides insight into mechanisms of eastern filbert blight resistance
    1
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    biorxiv.org/content/10.1101/2023.09.21.558899v1
  74. Jul 2023
  75. academic.oup.com academic.oup.com
    A new haplotype-resolved turkey genome to enable turkey genetics and genomics research
    1
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad051/7227510
  76. May 2023
  77. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of an Australian native grass species reveals a recent whole-genome duplication and biased gene retention of genes involved in stress response
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10176504/
  78. Apr 2023
  79. academic.oup.com academic.oup.com
    A chromosome-scale high-contiguity genome assembly of the cheetah (Acinonyx jubatus)
    1
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    academic.oup.com/jhered/advance-article/doi/10.1093/jhered/esad015/7069302
  80. Mar 2023
  81. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Improvements to the Gulf pipefish Syngnathus scovelli genome
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10038202/
  82. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    De novo chromosome-length assembly of the mule deer (Odocoileus hemionus) genome
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650288/
  83. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A phased, chromosome-scale genome of ‘Honeycrisp’ apple (Malus domestica)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9693968/
  84. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level assembly of the common vetch (Vicia sativa) reference genome
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650280/
  85. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level genome assembly and annotation of the maize elite breeding line Dan340
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9694154/
  86. Feb 2023
  87. www.sciencedirect.com www.sciencedirect.com
    A chromosome-level genome assembly of Ostrea denselamellosa provides initial insights into its evolution
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    sciencedirect.com/science/article/pii/S0888754323000265
  88. Jan 2023
  89. www.biorxiv.org www.biorxiv.org
    A chromosome-scale assembly for tetraploid sour cherry (Prunus cerasus L.) ‘Montmorency’ identifies three distinct ancestral Prunus genomes
    1
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    biorxiv.org/content/10.1101/2023.01.10.523438v1
  90. Dec 2022
  91. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A Chromosome-level assembly of the Japanese eel genome, insights into gene duplication and chromosomal reorganization
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9730501/
  92. Nov 2022
  93. academic.oup.com academic.oup.com
    The whole-genome assembly of an endangered Salicaceae species: Chosenia arbutifolia (Pall.) A. Skv
    1
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac109/6827246
  94. Sep 2022
  95. academic.oup.com academic.oup.com
    Comparative genome and evolution analyses of an endangered stony coral species Dendrophyllia cribrosa near Dokdo Islands in the East Sea
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    academic.oup.com/gbe/article/14/9/evac132/6677079
  96. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    STAG2 promotes the myelination transcriptional program in oligodendrocytes
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    ncbi.nlm.nih.gov/pmc/articles/PMC9439679/
  97. Jul 2022
  98. academic.oup.com academic.oup.com
    Chromosome-Level Genome Assembly of the Butter Clam Saxidomus purpuratus
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    academic.oup.com/gbe/article/14/7/evac106/6650251
  99. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level genome of the booklouse, Liposcelis brunnea, provides insight into louse evolution and environmental stress adaptation
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9295366/
  100. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of Plazaster borealis sheds light on the morphogenesis of multiarmed starfish and its regenerative capacity
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9270726/
  101. May 2022
  102. gigabytejournal.com gigabytejournal.com
    LT1, an ONT long-read-based assembly scaffolded with Hi-C data and polished with short reads
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    gigabytejournal.com/articles/51
  103. Mar 2022
  104. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    KOREF_S1: phased, parental trio-binned Korean reference genome using long reads and Hi-C sequencing methods
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8952264/
  105. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-length genome assembly and linkage map of a critically endangered Australian bird: the helmeted honeyeater
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8963300/