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  3. Sep 2025
  4. www.sciencedirect.com www.sciencedirect.com
    Spatially patterned kidney assembloids recapitulate progenitor self-assembly and enable high-fidelity in vivo disease modeling
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    sciencedirect.com/science/article/pii/S1934590925003285
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    The Ubiquitin–Proteasome System is an Important Driver of EBV-Associated Nasopharyngeal Carcinoma Progression: A Meta-Analysis of Transcriptomics Data
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    biorxiv.org/content/10.1101/2025.08.30.673297v1
  6. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Spatial colocalization and molecular crosstalk of myofibroblastic CAFs and tumor cells shape lymph node metastasis in oral squamous cell carcinoma
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    pmc.ncbi.nlm.nih.gov/articles/PMC12410789/
  7. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    An antibody-toxin conjugate targeting CD47 linked to the bacterial toxin listeriolysin O for cancer immunotherapy
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    pmc.ncbi.nlm.nih.gov/articles/PMC11952976/
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    Plasma exosomes from individuals with type 2 diabetes drive breast cancer aggression in patient-derived organoids
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    pmc.ncbi.nlm.nih.gov/articles/PMC12381303/
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    An HIV fusion-inhibitory lipopeptide provides robust post-exposure prophylaxis and prevents viral reservoir seeding in macaques
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    sciencedirect.com/science/article/pii/S2211124725009994
  10. Jul 2025
  11. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Insights into human melanocyte development and characteristics through pluripotent stem cells combined with single-cell sequencing
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    pmc.ncbi.nlm.nih.gov/articles/PMC12245449/
  12. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Dissecting FAP+ Cell Diversity in Pancreatic Cancer Uncovers an Interferon-Response Subtype of Cancer-Associated Fibroblasts with Tumor-Restraining Properties
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    pmc.ncbi.nlm.nih.gov/articles/PMC12214878/
  13. Jun 2025
  14. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Spatial–Temporal Diversity of Extrachromosomal DNA Shapes Urothelial Carcinoma Evolution and the Tumor Immune Microenvironment
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    pmc.ncbi.nlm.nih.gov/articles/PMC12130809/
  15. elifesciences.org elifesciences.org
    Adventitial fibroblasts direct smooth muscle cell-state transition in pulmonary vascular disease
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    elifesciences.org/reviewed-preprints/98558v2
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    Distinct molecular patterns in R6/2 HD mouse brain: Insights from spatiotemporal transcriptomics
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    sciencedirect.com/science/article/pii/S0896627325003617
  17. May 2025
  18. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Intratumoral Fusobacterium nucleatum Recruits Tumor-Associated Neutrophils to Promote Gastric Cancer Progression and Immune Evasion
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    pmc.ncbi.nlm.nih.gov/articles/PMC12079103/
  19. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Epigenetic silencing of DNA sensing pathway by FOXM1 blocks stress ligand-dependent antitumor immunity and immune memory
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    pmc.ncbi.nlm.nih.gov/articles/PMC12037779/
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    Inhibition of autotaxin activity with IOA-289 decreases fibrosis in mouse E0771 breast tumors
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    onlinelibrary.wiley.com/doi/10.1002/ijc.35471
  21. Mar 2025
  22. 52.53.155.43 52.53.155.43
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    Comparative Single-Cell Transcriptomics of Human Neuroblastoma and Preclinical Models Reveals Conservation of an Adrenergic Cell State
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    pmc.ncbi.nlm.nih.gov/articles/PMC11907193/
  24. Feb 2025
  25. 52.53.155.43 52.53.155.43
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    Individualized patient tumor organoids faithfully preserve human brain tumor ecosystems and predict patient response to therapy
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    sciencedirect.com/science/article/pii/S1934590925000025
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    Myofibroblasts emerge during alveolar regeneration following influenza-virus-induced lung injury
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    sciencedirect.com/science/article/pii/S2211124725000191
  28. Jan 2025
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    Spatial transcriptomic analysis identifies epithelium-macrophage crosstalk in endometriotic lesions
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  30. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Neonatal Brain Injury Triggers Niche-Specific Changes to Cellular Biogeography
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    pmc.ncbi.nlm.nih.gov/articles/PMC11680506/
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    Phenotypic plasticity and increased infiltration of peripheral blood-derived TREM1+ mono-macrophages following radiotherapy in rectal cancer
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    sciencedirect.com/science/article/pii/S266637912400658X
  32. Dec 2024
  33. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Exploring the Role of Ccn3 in Type III Cell of Mice Taste Buds
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    onlinelibrary.wiley.com/doi/full/10.1111/jnc.16291
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    Microglial lipid phosphatase SHIP1 limits complement-mediated synaptic pruning in the healthy developing hippocampus
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  35. www.biorxiv.org www.biorxiv.org
    Combined inhibition of S100A4 and TIGIT suppresses late-stage breast cancer metastasis to the lung by activating T and NK cells
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    biorxiv.org/content/10.1101/2024.11.24.624743v1
  36. Nov 2024
  37. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Spatial Multiomics Reveals Intratumoral Immune Heterogeneity with Distinct Cytokine Networks in Lung Cancer Brain Metastases
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    pmc.ncbi.nlm.nih.gov/articles/PMC11539001/
  38. www.mdpi.com www.mdpi.com
    NF-ΚB Activation as a Key Driver in Chronic Lymphocytic Leukemia Evolution to Richter’s Syndrome: Unraveling the Influence of Immune Microenvironment Dynamics
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  39. Sep 2024
  40. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Reconstitution of the Multiple Myeloma Microenvironment Following Lymphodepletion with BCMA CAR-T Therapy
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  41. Aug 2024
  42. www.cell.com www.cell.com
    Single-cell dissection of the human blood-brain barrier and glioma blood-tumor barrier
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    cell.com/neuron/fulltext/S0896-6273(24)00571-3
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Functional Contribution and Clinical Implication of Cancer-Associated Fibroblasts in Glioblastoma
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    ncbi.nlm.nih.gov/pmc/articles/PMC10922678/
  44. Jul 2024
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Timing of whole genome duplication is associated with tumor-specific MHC-II depletion in serous ovarian cancer
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    ncbi.nlm.nih.gov/pmc/articles/PMC11258338/
  46. Jun 2024
  47. www.sciencedirect.com www.sciencedirect.com
    Nicotinamide metabolism face-off between macrophages and fibroblasts manipulates the microenvironment in gastric cancer
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  48. May 2024
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    Integrative molecular and spatial analysis reveals evolutionary dynamics and tumor-immune interplay of in situ and invasive acral melanoma
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    sciencedirect.com/science/article/pii/S1535610824001363
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    Tumor niche network-defined subtypes predict immunotherapy response of esophageal squamous cell cancer
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    ncbi.nlm.nih.gov/pmc/articles/PMC11089351/
  51. www.biorxiv.org www.biorxiv.org
    Psilocybin Promotes Cell-Type-Specific Changes in the Orbitofrontal Cortex Revealed by Single-Nucleus RNA-seq
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    biorxiv.org/content/10.1101/2024.01.07.573163v1
  52. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Thrombopoietin mimetic stimulates bone marrow vascular and stromal niches to mitigate acute radiation syndrome
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    ncbi.nlm.nih.gov/pmc/articles/PMC11057170/
  53. Apr 2024
  54. aacrjournals.org aacrjournals.org
    Single-cell transcriptomics reveals pre-existing COVID-19 vulnerability factors in lung cancer patients
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    aacrjournals.org/mcr/article/22/3/240/734706/Single-Cell-Transcriptomics-Reveals-Pre-existing
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    Spatial and temporal mapping of breast cancer lung metastases identify TREM2 macrophages as regulators of the metastatic boundary
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    aacrjournals.org/cancerdiscovery/article/13/12/2610/731625/Spatial-and-Temporal-Mapping-of-Breast-Cancer-Lung
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    Regulation of muscle hypertrophy through granulin: Relayed communication among mesenchymal progenitors, macrophages, and satellite cells
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  57. Feb 2024
  58. faseb.onlinelibrary.wiley.com faseb.onlinelibrary.wiley.com
    Multi-organ single-cell RNA sequencing in mice reveals early hyperglycemia responses that converge on fibroblast dysregulation
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    faseb.onlinelibrary.wiley.com/doi/10.1096/fj.202302003R
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    Comparative transcriptomic analysis of bovine mesenchymal stromal cells reveals tissue-source and species-specific differences
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    ncbi.nlm.nih.gov/pmc/articles/PMC10838956/
  60. Jan 2024
  61. www.sciencedirect.com www.sciencedirect.com
    Single-cell transcriptomics of the immune system in ME/CFS at baseline and following symptom provocation
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    sciencedirect.com/science/article/pii/S266637912300602X
  62. dx.doi.org dx.doi.org
    Vulture: cloud-enabled scalable mining of microbial reads in public scRNA-seq data
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    dx.doi.org/10.1093/gigascience/giad117
  63. www.sciencedirect.com www.sciencedirect.com
    Integrative analysis of neuroblastoma by single-cell RNA sequencing identifies the NECTIN2-TIGIT axis as a target for immunotherapy
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    sciencedirect.com/science/article/pii/S1535610823004361
  64. www.sciencedirect.com www.sciencedirect.com
    An exhausted-like microglial population accumulates in aged and APOE4 genotype Alzheimer’s brains
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    sciencedirect.com/science/article/pii/S1074761323005320
  65. Dec 2023
  66. www.sciencedirect.com www.sciencedirect.com
    Integrated multi-omics profiling to dissect the spatiotemporal evolution of metastatic hepatocellular carcinoma
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    sciencedirect.com/science/article/pii/S1535610823004014
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  68. Nov 2023
  69. www.sciencedirect.com www.sciencedirect.com
    Structured wound angiogenesis instructs mesenchymal barrier compartments in the regenerating nerve
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    sciencedirect.com/science/article/pii/S0896627323008061
  70. Oct 2023
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    Alpha-1 adrenergic signaling drives cardiac regeneration via extracellular matrix remodeling transcriptional program in zebrafish macrophages
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    sciencedirect.com/science/article/pii/S1534580723005130
  72. www.cell.com www.cell.com
    Single-cell transcriptome profiling reveals immune and stromal cell heterogeneity in primary Sjögren’s syndrome
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    cell.com/iscience/abstract/S2589-0042(23)02020-5
  73. Sep 2023
  74. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Spatially Distinct Otic Mesenchyme Cells show Molecular and Functional Heterogeneity Patterns Before Hearing Onset
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    ncbi.nlm.nih.gov/pmc/articles/PMC10502415/
  75. www.sciencedirect.com www.sciencedirect.com
    Single-cell profiling of murine bladder cancer identifies sex-specific transcriptional signatures with prognostic relevance
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    sciencedirect.com/science/article/pii/S2589004223017807
  76. Jul 2023
  77. www.sciencedirect.com www.sciencedirect.com
    Temporal transcriptome features identify early skeletal commitment during human epiphysis development at single-cell resolution
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    sciencedirect.com/science/article/pii/S2589004223012774
  78. Jun 2023
  79. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Single-cell RNA-seq uncovers novel metabolic functions of Schwann cells beyond myelination
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    onlinelibrary.wiley.com/doi/10.1111/jnc.15877
  80. Apr 2023
  81. www.biorxiv.org www.biorxiv.org
    Brain and blood single-cell transcriptomics in acute and subacute phases after experimental stroke
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    biorxiv.org/content/10.1101/2023.03.31.535150v1
  82. Mar 2023
  83. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Proliferative exhausted CD8+ T cells exacerbate long-lasting anti-tumor effects in human papillomavirus-positive head and neck squamous cell carcinoma
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    ncbi.nlm.nih.gov/pmc/articles/PMC9946444/
  84. Dec 2022
  85. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Single-cell RNA sequencing uncovers dynamic roadmap and cell-cell communication during buffalo spermatogenesis
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    ncbi.nlm.nih.gov/pmc/articles/PMC9793287/
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    Dental niche cells directly contribute to tooth reconstitution and morphogenesis
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    sciencedirect.com/science/article/pii/S2211124722016151
  87. Sep 2022
  88. www.sciencedirect.com www.sciencedirect.com
    Ensembles of endothelial and mural cells promote angiogenesis in prenatal human brain
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    sciencedirect.com/science/article/pii/S0092867422011266
  89. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Combined – whole blood and skin fibroblasts- transcriptomic analysis in Psoriatic Arthritis reveals molecular signatures of activity, resistance and early response to treatment
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    ncbi.nlm.nih.gov/pmc/articles/PMC9493103/
  90. Jun 2022
  91. www.sciencedirect.com www.sciencedirect.com
    Absence of microglia promotes diverse pathologies and early lethality in Alzheimer’s disease mice
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    sciencedirect.com/science/article/pii/S2211124722007434