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dx.doi.org dx.doi.org

A DNA nicking Class 1 OLD family nuclease mediates phage defense in Vibrio cholerae and is countered by a phage-encoded inhibitor

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1. scibot 04 Sep 2025
  
  in Public
  
  RRID:SCR_025852
  
  DOI: 10.1093/nar/gkaf728
  
  Resource: University of California at Berkeley Vincent J. Coates Proteomics/Mass Spectrometry Laboratory Core Facility (RRID:SCR_025852)
  
  Curator: @scibot
  
  SciCrunch record: RRID:SCR_025852
  
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dx.doi.org/10.1093/nar/gkaf728
Aug 2025
www.biorxiv.org www.biorxiv.org

Recurrent acquisition of nuclease-protease pairs in antiviral immunity

1
1. scibot 01 Aug 2025
  
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  RRID:SCR_025852
  
  DOI: 10.1101/2025.07.28.667249
  
  Resource: University of California at Berkeley Vincent J. Coates Proteomics/Mass Spectrometry Laboratory Core Facility (RRID:SCR_025852)
  
  Curator: @scibot
  
  SciCrunch record: RRID:SCR_025852
  
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biorxiv.org/content/10.1101/2025.07.28.667249v1
Jul 2025
www.nature.com www.nature.com

Structure of an archaeal ribosome reveals a divergent active site and hibernation factor

1
1. scibot 22 Jul 2025
  
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  RRID:SCR_025852
  
  DOI: 10.1038/s41564-025-02065-w
  
  Resource: University of California at Berkeley Vincent J. Coates Proteomics/Mass Spectrometry Laboratory Core Facility (RRID:SCR_025852)
  
  Curator: @scibot
  
  SciCrunch record: RRID:SCR_025852
  
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nature.com/articles/s41564-025-02065-w
www.biorxiv.org www.biorxiv.org

XoxF and the Calvin-Benson Cycle Mediate Lanthanide-Dependent Growth on Methanol in Bradyrhizobium and Sinorhizobium

1
1. scibot 11 Jul 2025
  
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  RRID:SCR_025852
  
  DOI: 10.1101/2025.06.30.662339
  
  Resource: University of California at Berkeley Vincent J. Coates Proteomics/Mass Spectrometry Laboratory Core Facility (RRID:SCR_025852)
  
  Curator: @scibot
  
  SciCrunch record: RRID:SCR_025852
  
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  RRID:SCR_025852
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biorxiv.org/content/10.1101/2025.06.30.662339v1
May 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Calpains orchestrate secretion of annexin-containing microvesicles during membrane repair

1
1. scibot 20 May 2025
  
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  RRID:SCR_025852
  
  DOI: 10.1083/jcb.202408159
  
  Resource: University of California at Berkeley Vincent J. Coates Proteomics/Mass Spectrometry Laboratory Core Facility (RRID:SCR_025852)
  
  Curator: @scibot
  
  SciCrunch record: RRID:SCR_025852
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12083247/
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Phosphate-binding pocket on cyclin B governs CDK substrate phosphorylation and mitotic timing

1
1. scibot 19 May 2025
  
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  RRID:SCR_025852
  
  DOI: 10.1038/s41467-025-59700-7
  
  Resource: University of California at Berkeley Vincent J. Coates Proteomics/Mass Spectrometry Laboratory Core Facility (RRID:SCR_025852)
  
  Curator: @scibot
  
  SciCrunch record: RRID:SCR_025852
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12062237/
Apr 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Phosphate-binding pocket on cyclin B governs CDK substrate phosphorylation and mitotic timing

1
1. scibot 16 Apr 2025
  
  in Public
  
  RRID:SCR_025852
  
  DOI: 10.1101/2024.02.28.582599
  
  Resource: University of California at Berkeley Vincent J. Coates Proteomics/Mass Spectrometry Laboratory Core Facility (RRID:SCR_025852)
  
  Curator: @scibot
  
  SciCrunch record: RRID:SCR_025852
  
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pmc.ncbi.nlm.nih.gov/articles/PMC10925351/
Feb 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Capturing dynamic phage-pathogen coevolution by clinical surveillance

1
1. scibot 27 Feb 2025
  
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  RRID:SCR_025852
  
  DOI: 10.1101/2025.01.29.635557
  
  Resource: University of California at Berkeley Vincent J. Coates Proteomics/Mass Spectrometry Laboratory Core Facility (RRID:SCR_025852)
  
  Curator: @scibot
  
  SciCrunch record: RRID:SCR_025852
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11838301/
Jan 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

A Class 1 OLD family nuclease encoded by Vibrio cholerae is countered by a vibriophage-encoded direct inhibitor

1
1. scibot 24 Jan 2025
  
  in Public
  
  RRID:SCR_025852
  
  DOI: 10.1101/2025.01.06.631583
  
  Resource: University of California at Berkeley Vincent J. Coates Proteomics/Mass Spectrometry Laboratory Core Facility (RRID:SCR_025852)
  
  Curator: @scibot
  
  SciCrunch record: RRID:SCR_025852
  
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  RRID:SCR_025852
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pmc.ncbi.nlm.nih.gov/articles/PMC11741312/
Nov 2024
www.biorxiv.org www.biorxiv.org

Structure of an Archaeal Ribosome with a Divergent Active Site

1
1. scibot 22 Nov 2024
  
  in Public
  
  RRID:SCR_025852
  
  DOI: 10.1101/2024.11.12.623245
  
  Resource: None
  
  Curator: @scibot
  
  SciCrunch record: RRID:SCR_025852
  
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biorxiv.org/content/10.1101/2024.11.12.623245v1

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