2 Matching Annotations
  1. Jul 2024
    1. Case: patient from family 1, male

      Disease Assertion: UCD/OTCD

      Family Info: Family history of the disease

      Case Presenting HPOs: coma(HP:0001259), lethargy(HP:0001254), hyperammonemia (HP:0001987), Neonatal Onset HP:0003623

      Case HPO FreeText: Poor feeding, poor spirit

      Case NOT HPOs:

      Case NOT HPO Free Text:

      Case Previous Testing: Genomic DNA was extracted using the QIAamp DNA Blood Midi Kit (Qiagen, Duesseldorf, Germany). Quality control assessment of DNA samples was performed using the NanoDrop 2000 ultra-microvolume nucleic acid and protein spectrophotometer (Thermo, Waltham, MA, USA). The purity of DNA was required to be between 1.8 and 2.0.

      Supplemental Data: TABLE 1, admitted to neonatal department because of poor feeding, poor spirit, coma, and lethargy. The maternal grandmother of the proband in this family had given birth to 3 boys and 2 girls. Two boys died within 1 month after birth

      Variant: NM_000531.6: c.867+1G>C

      ClinVarID:N/A

      CAID: CA412723994

      gnomAD:

      Gene Name: OTC (ornithine transcarbamylase)

    1. Case: patient #51, male, Japanese

      Disease Assertion: UCD/OTCD

      Family Info: N/A

      Case Presenting HPOs: neonatal(HP:0003623), intellectual disability (HP:0001249), seizure (HP:0001250),Hyperammonemia (HP:0001987)

      Case HPO FreeText: Hypertonus, Autism, Acute liver failure. very high blood ammonia

      Case NOT HPOs:

      Case NOT HPO Free Text:

      Case Previous Testing: The mRNA ref seq were, wherein the “A” nucleotide of the start codon ATG constituted as +1 numbering of the cDNA sequence. Met encoded by the start codon ATG also represented +1 for the amino acid numbering as set forth by the preprotein seq. PolyPhen-2, SIFT, and I-Mutant 3 tools were used for predicting the potential impact of an amino acid alteration in missense mutations on the function of each enzyme.

      Supplemental Data: Table 1

      Variant: NM_000531.6:c.867+1G>C

      ClinVarID: N/A

      CAID: CA412723994

      gnomAD:

      Gene Name: OTC (ornithine transcarbamylase)