14 Matching Annotations
  1. Mar 2022
    1. THE PLASMA MEMBRANE
      • Phospholipids, cholesterol, proteins, oligosaccharide chains covalently linked to several phospholipid and protein molecules
      • Selective barrier = regulates passage of materials
      • Keeps constant ion content of cytoplasm
      • Recognition and signalling functions = role in interacting with environment
      • Integrin protein, liked to cytoskeleton and ECM = continuous exchange of influences in both directions
      • 7.5 to 10nm thickness = visible only on electron microscope
      • Membrane phospholipids are amphipathic = two non-polar/hydrophobic fatty acids linked to charged polar/hydrophilic head - phosphate group
        • Most stable in bilayer
      • Cholesterol, sterol lipid, insert at varying densities in tails= restricts movement and regulates fluidity of membrane
      • Red blood cells phosphatidylcholine and sphingomyelin = phospholipids more abundant in outer and phosphatidylserine and phosphatidylethanolamine are more concentrated in the inner layer
      • Glycolipids = oligosaccharide chains that extend outward from cell surface and contribute to glycocalyx = cell surface coating
      • TEM = cell membrane - trilaminar appearance after fixation with osmium tetroxide
        • Osmium binds polar heads of phospholipids and oligosaccharide chains - produced two dark outer lines = enclose light band of osmium-free fatty acids
      • Integral proteins = directly within lipid bilayer
        • Can be extracted using only detergents to disrupt the lipids
        • Polypeptide chains span membrane, many times = multipass proteins
        • Hydrophobic interactions between bilayer and nonpolar amino acids
        • Freeze-fracture electron microscope; parts of many integral proteins produce from both outer or inner membrane surface
      • Peripheral proteins = bound to one membrane surface, usually cytoplasmic side
        • Can be extracted with salt solutions
      • Carbohydrate of glycoproteins project from external surface of plasma membrane and contribute to glycocalyx = receptors
        • Cell adhesion, recognition, response to hormones
      • All membranes are asymmetric
      • Many proteins not bound rigidly = able to move laterally
        • Often restricted by cytoskeletal attachments
        • Epithelial cells; tight junctions between cells - restrict lateral diffusion of unattached transmembrane proteins and outer layer lipids - different domains with cell membranes
        • Fluid mosaic model
      • Proteins of large enzyme complexes are usually less mobile, esp those involved in the transduction of signals from outside cell
        • Located in specialised membrane patches = lipid rafts = higher conc of cholesterol and satu fatty acids = reduce lipid fluidity, presence of scaffold proteins - maintain spatial relationships between ezymes and signalling proteins = allows proteins to remain close = interact more efficiently
    2. CELL DIFFERENTIATION
      • Zygote = spermatzoon with an oocyte
        • First cellular divisions = blastomeres = all tissue types
      • Inner cell mass = embryonic stem cells
      • Differentiation = differently express sets of genes that mediate cytoplasmic activities = very efficient in specialised functions - change shape
        • muscle cell precursor elongate into fiber-like cells, large myosin and actin
        • specialised for using these proteins to convert chemical energy into forceful contractions
      • specialised cells greatly expanded their capacity for one or more of these functions during differentiation
      • changes in cells' microenvironments under normal and pathologic conditions can cause same cell type to have variable features and activities
      • cells similar structure-wise often have different receptors for hormones and ECM = behaves differently
        • Breast fibroblasts and uterine smooth muscle cells = sensitive to f sex hormones

    Annotators

    1. Esophagus
      • Collapsible muscular tube = 25cm
      • Posterior to trachea
      • Inferior end of laryngopharynx
      • inferior aspect of neck
      • Mediastinum anterior to vertebral column
      • Pierces diaphragm - oesophageal hiatus
      • Superior of stomach = end
      • Hiatus hernia = protrusion of section of stomach Histology
      • Mucosa = nonkeratinized stratified squamous epithelium, lamina propria (areolar connective), muscularis mucosae (smooth muscle)
        • stratified squamous [lips, mouths, tongue, oropharynx, laryngopharynx and esophagus] = considerable protection against abrasion
        • submucosa; areolar connective, blood vessels, mucous glands
      • muscularis of superior third = skeletal
      • muscularis of intermed = skeletal + smooth
      • muscularis of inferior = smooth
        • end of esophagus --
    2. Layers of the GI Tract
      • Epithelium
        • nonkeratinzied stratified squamous epithelium
        • simple columnar epithelium
        • also have exocrine cells that secrete mucus and fluid = enteroendocrine cells - secrete hormones
      • Laminae Propria
        • areolar connective tissue = blood, lymphatic vessels
        • supports epithelium - binds to muscularis mucosae
        • MALT = immune system cells
      • Muscularis Mucosae
        • mucous membrane into small folds = increase SA
          1. Submucosa
            • aerolar connective tissue
            • extensive network of neurones = cosal plexus
            • glands and lymphatic tissue
          2. Muscularis
            • skeletal muscle = voluntary swallowing and defecation
            • smooth muscle - inner = circular - outer = longitudinal
            • second plexus of neurons = mycenteric plexus
          3. Serosa
            • serous membrane - areolar connective tissues and simple squamous epithelium
            • visceral peritoneum
    3. Tongue

      Skeletal muscle covered with mucous membrane Symmetrical halves by a medium septum 1. extrinsic = insert into connective tissue move tongue side, in/out 2. intrinsic = insert into connective tissue within tongue<br /> alter shape, size for speech and swallowing

      Lingual frenulum = fold of mucous membrane

    4. Teeth

      Sockets of alveolar processes of mandible and maxillae Covered by gingivae Lined by periodental ligament = dense fibrous connective tissue - anchors teeth 1. Crown 2. Roots - 1-3 3. Neck Dentin forms majority = calcified connective tissue * Crown = enamel * Root = cementum Pulp cavity = within crown filled with pulp * Narrow extensions = root canals - apical foramen

    Annotators

    1. Urinary Hydrogen, Ammonium, and Phosphate Ions
      • Non-volatile acid excreted in urine, most = H+ excreted as undissociated acid = buffers urinary pH between 5.5-7.0
        • acid secretion = inorganic acids e.g. phosphate and ammonium ions, uric acid, dicarboxylic acids, tricarboxylic acids e.g. citric
        • major source is H2SO4 = generated from sulphur containing compounds ingested in foods - amino acids cysteine and methionine
        • strong acid dissociated into H+ and SO42- in blood and urine
        • urinary excretion of H2PO4- removes acid
      • Metabolic homeostasis = excrete equal phosphate as ingested
      • NH4+ major contributors to buffering urinary pH
        • NH3 is base = combines with protons to produce NH4+ ions - pKa = 9.25
        • NH3 produced from amino acid catabolism or absorbed through intestine - toxic so kept at neural tissues
    2. Intracellular pH
      • PO43- and proteins = major buffers in maintaining constant pH of ICF
      • H2PO42- = inorganic, dissociates to generate H+ and the conjugate base, HPO42- with pKa of 7.2
      • Organic phosphate anions e.g. glucos-6-phosphate, ATP, also act as buffers
      • ICF contains high content of proteins, histidine and other amino acids = accept protons in a similar way to Hb
      • H+ out of cell maintains intracellular pH
      • Metabolism = CO2 and other acids
      • pKa for most metabolic carboxylic acids is below 5 = dissociates completely at pH of blood and cellular fluid
      • Metabolic anions transported out of cell with H+.
        • Cell too acidic, more H+ out for Na+
        • Cell too alkaline, more bicarbonate out for Cl-
    3. Bicarbonate and Hemoglobin in the Red Blood Cell
      • TCA cycle = CO2 diffuses into intestinal fluid - blood plasma - rbcs
      • rbcs contain high amount of carbonic anhydrase = CO2 rapidly converted to carbonic acid
      • Carbonic acid dissociates = H+ released, buffered by certain amino acid side chains in Hb
        • Bicarbonate anion is transported out of rbc in exchange for Cl- = bicarbonate is relatively high in plasma
      • rbc approaches lung = equilibrium reverses
        • CO2 is released from rbc = more H2CO3 dissociates into CO2 and H2O
        • H+ combine with bicarbonate
        • Hb loses some of its H+, allows it to bind to O more readily
      • Bicarbonate and H2CO3 diffuse through capillary wall from blood into intestinal fluid = major buffer for plasma and intestinal fluid
      • Protein content of blood is high e.g. albumin = contribute to buffering capacity through amino acid side chains = accept and release protons
        • Protein content of intestinal fluid is too low to serve as an effective buffer
    4. The Bicarbonate Buffer System
      • CO2 produced from fuel oxidation in TCA cycle
      • Normal metabolic produces 13 moles of CO2
        • dissolves in water = H2CO3 - accelerated by carbonic anhydrase
        • weak acid - H+ and HCO3-
        • pKa = 3.8 - almost completely dissociated in blood
        • theoretically unable to buffer blood at 7.4
        • However CO2 replenished from body fluids and air
        • Conc of base increased, H+ removed, H2CO3 dissociates
        • Forces dissolved CO2 to react with H2O = H2CO3
        • Dissolved CO2 is in equilibrium with CO2 in air
        • CO2 availability adjusted through by rate of breath and expiration
      • pKa for bicarb buffer system in the body combines with Kb with chemical pKa = 6.1
      • Respiratory centre controlling rate of breath, hypothalamus, = sensitive to pH flux
        • pH falls individuals breathe more rapidly and expire more CO2
        • pH rises, they breathe more shallowly
    5. BUFFERS
      • Weak acid and its conjugate base
      • Resist changes in pH when H+ or OH- added
      • Half of OH- added = Half of conjugate acid dissociated
        • [A-] = [HA] thus pKa
      • More OH- more conjugate acid dissociate to H+ to combine with OH- = water = increase in pH
      • Add H+ to buffer at pKa = conjugate base combine with H+ to form HA = no fall in pH
      • Compensate for influx or removal of H+ within 1 pH of pKa
        • [A-]:HA changes from 1:1 to 1:10
        • More conc buffers are more effective
    6. Hydrogen Bonds in Water

      Caused due to dipole nature of water * two unshared electrons that form an electron-dense cloud around it * above and below plane * covalent bond between H and O * e- attracted to O = partial negative - more electronegative * H = partial positive * Form H bonds - hydrogen shells * Weak noncovalent interaction between H and the more electronegative atom of an acceptor molecule * O can from H bonds with two other acceptor molecules = each H2O bonded to 4 other in a fluid 3D lattice * anions surrounded by hydration shell arranged with their hydrogen atoms closes to the anion * O of H2O interacts with cations to surround * H bonds strong enough to dissolve polar molecules in H2O and separate charges * Weak enough to allow movement * Strength = 4kcal/mol

    Annotators

    1. As in all other areas of medicine, it is essential in clinical genetics to do the following

      correct diagnosis, provide support, treatment

    Annotators