- Sep 2021
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www.science.org www.science.org
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Israelow, B., Mao, T., Klein, J., Song, E., Menasche, B., Omer, S. B., & Iwasaki, A. (2021). Adaptive immune determinants of viral clearance and protection in mouse models of SARS-CoV-2. Science Immunology. https://doi.org/10.1126/sciimmunol.abl4509
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The BMJ on Twitter. (n.d.). Twitter. Retrieved 3 September 2021, from https://twitter.com/bmj_latest/status/1432056729743863810
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Jeremy Howard. (2021, August 29). I’ve been analyzing the UK covid data and I’ve just discovered something shocking. Cases in chidrens in England have just smashed all-time highs. Nearly double what they’ve ever been before. And rising VERY rapidly. Schools are about to reopen. With far fewer restrictions. Https://t.co/rNhW4U98BR [Tweet]. @jeremyphoward. https://twitter.com/jeremyphoward/status/1432118975060594691
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Kraemer, M. U. G., Hill, V., Ruis, C., Dellicour, S., Bajaj, S., McCrone, J. T., Baele, G., Parag, K. V., Battle, A. L., Gutierrez, B., Jackson, B., Colquhoun, R., O’Toole, Á., Klein, B., Vespignani, A., COVID-19 Genomics UK (COG-UK) Consortium‡, Volz, E., Faria, N. R., Aanensen, D. M., … Pybus, O. G. (2021). Spatiotemporal invasion dynamics of SARS-CoV-2 lineage B.1.1.7 emergence. Science, 373(6557), 889–895. https://doi.org/10.1126/science.abj0113
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- Aug 2021
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Latest Data on COVID-19 Vaccinations by Race/Ethnicity | KFF. (n.d.). Retrieved August 27, 2021, from https://www.kff.org/coronavirus-covid-19/issue-brief/latest-data-on-covid-19-vaccinations-race-ethnicity/
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Tim Plante, MD MHS on Twitter: “Just reported: About half of recent ICU patients with #Covid19 in #Vermont are vaccinated. Sounds like the vaccines aren’t working, right? WRONG. Vaccines are working and here’s why. But first, let’s talk a bit about unprotected sex. A thread. (Refs at the end.) 1/n https://t.co/iyQcfCDAfh” / Twitter. (n.d.). Retrieved August 27, 2021, from https://twitter.com/tbplante/status/1430222978961317896
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Liu, Y., Arase, N., Kishikawa, J., Hirose, M., Li, S., Tada, A., Matsuoka, S., Arakawa, A., Akamatsu, K., Ono, C., Jin, H., Kishida, K., Nakai, W., Kohyama, M., Nakagawa, A., Yamagishi, Y., Nakagami, H., Kumanogoh, A., Matsuura, Y., … Arase, H. (2021). The SARS-CoV-2 Delta variant is poised to acquire complete resistance to wild-type spike vaccines (p. 2021.08.22.457114). https://doi.org/10.1101/2021.08.22.457114
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Prof. Christina Pagel on Twitter: “THREAD latest on B.1.617.2 variant in England: B.1.617.2 (1st discovered in India) is now dominant in England. Here is a thread summarising latest PHE report and Sanger local data. TLDR: it is NOT good news. 1/7” / Twitter. (n.d.). Retrieved August 24, 2021, from https://twitter.com/chrischirp/status/1399333330286415876
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Madhi, S. A., Koen, A. L., Izu, A., Fairlie, L., Cutland, C. L., Baillie, V., Padayachee, S. D., Dheda, K., Barnabas, S. L., Bhorat, Q. E., Briner, C., Aley, P. K., Bhikha, S., Hermanus, T., Horne, E., Jose, A., Kgagudi, P., Lambe, T., Masenya, M., … Kwatra, G. (2021). Safety and immunogenicity of the ChAdOx1 nCoV-19 (AZD1222) vaccine against SARS-CoV-2 in people living with and without HIV in South Africa: An interim analysis of a randomised, double-blind, placebo-controlled, phase 1B/2A trial. The Lancet HIV, 0(0). https://doi.org/10.1016/S2352-3018(21)00157-0
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CNN, Kaitlan Collins, John Harwood, Kevin Liptak, Jeremy Diamond and Kate Sullivan. ‘CDC Changes Mask Guidance in Response to Threat of Delta Variant of Covid-19’. CNN. Accessed 23 August 2021. https://www.cnn.com/2021/07/27/politics/cdc-mask-guidance/index.html.
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Kai Kupferschmidt on Twitter: “One of the most important things I was looking for in reporting on #SARSCoV2 evolution was a way of making sense of all the virus variants, putting them in some framework. And one of the most useful things I found for that is this antigenic map. It’s worth explaining a bit: Https://t.co/miO8Kh9w9e” / Twitter. (n.d.). Retrieved August 22, 2021, from https://twitter.com/kakape/status/1428650961652916230?s=20
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Apple delays office return to January as Delta variant spreads—Bloomberg | Reuters. (n.d.). Retrieved August 21, 2021, from https://www.reuters.com/technology/apple-delays-office-return-least-january-bloomberg-news-2021-08-20
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We shouldn’t be giving Covid boosters while millions wait for a first dose | Andrew Pollard and Seth Berkley | The Guardian. (n.d.). Retrieved August 17, 2021, from https://www.theguardian.com/commentisfree/2021/aug/13/covid-boosters-dose-vaccine
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Pfizer vaccine offers ‘100% protection’ against South African variant, new study suggests. (n.d.). Retrieved 16 August 2021, from https://www.nationalworld.com/health/coronavirus/pfizer-vaccine-offers-100-protection-against-south-african-variant-new-study-suggests-3187840
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twitter.com twitter.com
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André Picard on Twitter: “Most of those numbers are in the column, which focuses on a) the risk of the Delta variant to children under 12 and b) the 29% of Canadians who are not fully vaccinated. Brace yourself for more COVID-19 nastiness https://t.co/V0agVYvKRx” / Twitter. (n.d.). Retrieved August 13, 2021, from https://twitter.com/picardonhealth/status/1425316861176995840
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Apple Podcasts. “The Ezra Klein Show: The Good and Bad News About the Delta Variant on Apple Podcasts.” Accessed August 13, 2021. https://podcasts.apple.com/us/podcast/the-good-and-bad-news-about-the-delta-variant/id1548604447?i=1000531189768.
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Emerging signs COVID-19 vaccines may not stop Delta variant transmission, England says—The Globe and Mail. (n.d.). Retrieved August 12, 2021, from https://www.theglobeandmail.com/world/article-emerging-signs-covid-19-vaccines-may-not-stop-delta-variant-england/?utm_medium=Referrer:+Social+Network+/+Media&utm_campaign=Shared+Web+Article+Links
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What Is “Natural Immunity”? And Why Should You Get the Vaccine Even if You Already Had COVID? - The Bulwark. (n.d.). Retrieved August 11, 2021, from https://www.thebulwark.com/what-is-natural-immunity-and-why-should-you-get-the-vaccine-even-if-you-already-had-covid/
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Breakthrough cases aren’t the cause of the US Covid-19 surge—Vox. (n.d.). Retrieved August 11, 2021, from https://www.vox.com/22602039/breakthrough-cases-covid-19-delta-variant-masks-vaccines
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MicroCOVID Project. (n.d.). Retrieved August 11, 2021, from https://www.microcovid.org
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Nasreen, Sharifa, Hannah Chung, Siyi He, Kevin A. Brown, Jonathan B. Gubbay, Sarah A. Buchan, Deshayne B. Fell, et al. “Effectiveness of COVID-19 Vaccines against Variants of Concern in Ontario, Canada,” July 16, 2021. https://doi.org/10.1101/2021.06.28.21259420.
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Callaway, E. (2021). Remember Beta? New data reveal variant’s deadly powers. Nature, d41586-021-02177–3. https://doi.org/10.1038/d41586-021-02177-3
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Craig Spencer MD MPH. (2021, August 6). Even with Delta, the likelihood of severe illness if you’re fully immunized is still a small fraction of the likelihood for the unvaccinated. In other words, nearly every COVID-19-related death right now is preventable with vaccination. [Tweet]. @Craig_A_Spencer. https://twitter.com/Craig_A_Spencer/status/1423674337089949710
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Baraniuk, C. (2021). Covid-19: How effective are vaccines against the delta variant? BMJ, 374, n1960. https://doi.org/10.1136/bmj.n1960
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Rafael Irizarry. (2021, August 8). Vaccines work in a gif update: COVID19 cases versus vaccination rates in US states through time. The Delta variant effect can be seen clearly starting in July. States with lower vaccination rates are affected much worse. Https://t.co/e0SQpa8Qg0 [Tweet]. @rafalab. https://twitter.com/rafalab/status/1424440520361787392
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Twitter. “Mia Malan on Twitter.” Accessed August 9, 2021. https://twitter.com/miamalan/status/1423531025313976322.
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ReconfigBehSci on Twitter: ‘RT @Arrianna_Planey: More people have died of COVID in 2021 than in 2020. How are we in “a better place”? Https://t.co/Rc0Swmr9az’ / Twitter. (n.d.). Retrieved 9 August 2021, from https://twitter.com/SciBeh/status/1424464272713666561
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News, A. B. C. “Protests against Mandated COVID-19 Vaccines Pop up across US.” ABC News. Accessed August 9, 2021. https://abcnews.go.com/Health/live-updates/covid-delta-variant/?id=79213051.
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Barnard-Mayers, E. J. M., Ruby. (2021, August 6). How We’ll Know It’s Finally Time to Stop Masking. Slate Magazine. https://slate.com/technology/2021/08/delta-variant-covid-masks-vaccines-boosters.html
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Fisman, D. N., & Tuite, A. R. (2021). Progressive Increase in Virulence of Novel SARS-CoV-2 Variants in Ontario, Canada. MedRxiv, 2021.07.05.21260050. https://doi.org/10.1101/2021.07.05.21260050
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Covid-19 news: Pregnant women in England urged to get vaccinated | New Scientist. (n.d.). Retrieved August 4, 2021, from https://www.newscientist.com/article/2237475-covid-19-news-pregnant-women-in-england-urged-to-get-vaccinated/
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Covid Explodes in Cancun, Los Cabos as New Wave Hits Mexico. (2021, July 23). Bloomberg.Com. https://www.bloomberg.com/news/articles/2021-07-23/covid-explodes-in-cancun-and-los-cabos-as-third-wave-hits-mexico
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UK scientists caution that lifting of Covid rules is like building ‘variant factories’. (2021, July 4). The Guardian. http://www.theguardian.com/world/2021/jul/04/uk-scientists-caution-that-lifting-of-covid-rules-is-like-building-variant-factories
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Press ·, The Canadian. “Demand for COVID-19 Vaccines Dropping in Canada — and Some Fear It Could Mean Tossed Doses | CBC News.” CBC, July 21, 2021. https://www.cbc.ca/news/health/covid-vaccine-demand-dropping-canada-1.6111448.
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Facebook, Twitter, options, S. more sharing, Facebook, Twitter, LinkedIn, Email, URLCopied!, C. L., & Print. (2021, July 19). Vaccines are incredibly effective against Delta variant. So why do we need to wear masks indoors? Los Angeles Times. https://www.latimes.com/california/story/2021-07-19/covid-vaccines-work-why-is-la-mask-mandate-necessary
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twitter.com twitter.com
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Justin Baragona on Twitter: “There seems to be a concerted effort today by Fox’s daytime news shows to promote the vaccines to its audience. Dr. Marc Siegel says ‘the Delta variant needs to be a wake-up call to get vaccinated.’ Anchor John Roberts then directs viewers to the government vaccine website. Https://t.co/T5b21nXCfe” / Twitter. (n.d.). Retrieved August 4, 2021, from https://twitter.com/justinbaragona/status/1417178420950220811
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Shrotri, M., Navaratnam, A. M. D., Nguyen, V., Byrne, T., Geismar, C., Fragaszy, E., Beale, S., Fong, W. L. E., Patel, P., Kovar, J., Hayward, A. C., & Aldridge, R. W. (2021). Spike-antibody waning after second dose of BNT162b2 or ChAdOx1. The Lancet, 398(10298), 385–387. https://doi.org/10.1016/S0140-6736(21)01642-1
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Marc Lipsitch. (2021, July 26). Https://apps.who.int/iris/rest/bitstreams/1358525/retrieve just out from @WHO Guidance on conducting vaccine effectiveness evaluations in the setting of new SARS-CoV-2 variants INTERIM GUIDANCE 22 JULY 2021 [Tweet]. @mlipsitch. https://twitter.com/mlipsitch/status/1419613491745464322
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twitter.com twitter.comTwitter1
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John Burn-Murdoch. (2021, May 27). NEW: B.1617.2 is fuelling a third wave in the UK, with not only cases but also hospital admissions rising. Vaccines will make this wave different to those that have come before, but it remains a concern, and one that other countries will soon face. Thread on everything we know: Https://t.co/4825qOqgrl [Tweet]. @jburnmurdoch. https://twitter.com/jburnmurdoch/status/1397995388267810818
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Page, M. L. (n.d.). UK conditions are ideal for evolving vaccine-resistant covid variants. New Scientist. Retrieved 4 August 2021, from https://www.newscientist.com/article/mg25133453-400-uk-conditions-are-ideal-for-evolving-vaccine-resistant-covid-variants/
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Hopes UK trial will allay pregnant women’s Covid vaccine concerns. (2021, August 3). The Guardian. http://www.theguardian.com/world/2021/aug/03/hopes-uk-trial-will-allay-pregnant-womens-covid-vaccine-concerns
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Lopez Bernal, Jamie, Nick Andrews, Charlotte Gower, Eileen Gallagher, Ruth Simmons, Simon Thelwall, Julia Stowe, et al. “Effectiveness of Covid-19 Vaccines against the B.1.617.2 (Delta) Variant.” New England Journal of Medicine 0, no. 0 (July 21, 2021): null. https://doi.org/10.1056/NEJMoa2108891.
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twitter.com twitter.com
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Zeke Emanuel on Twitter: “Masks are off, theaters and indoor dining are back: Life seems to be returning to normal. But the highly transmissible Delta variant is spreading quickly, & we aren’t even halfway to a fully vaccinated population. It’s time for employer vaccine mandates. Https://t.co/34UArFfHN5” / Twitter. (n.d.). Retrieved August 1, 2021, from https://twitter.com/ZekeEmanuel/status/1418266496749428737?s=20
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Partisanship Isn’t The Only Reason Why So Many Americans Remain Unvaccinated | FiveThirtyEight. (n.d.). Retrieved August 1, 2021, from https://fivethirtyeight.com/features/partisanship-isnt-the-only-reason-why-so-many-americans-remain-unvaccinated/
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- Jul 2021
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twitter.com twitter.com
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Carl T. Bergstrom. (2021, May 27). An update on the B.1.617.2 lineage. I’m concerned. Not because of reduced vaccine efficacy, but simply because a further increase in transmissibility above B.1.1.7 would be quite bad news for countries where vaccination is low and for hopes of near-elimination everywhere. [Tweet]. @CT_Bergstrom. https://twitter.com/CT_Bergstrom/status/1398029743954432005
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Meaghan Kall 🏳️🌈 on Twitter: “The updated cumulative growth curves showing continued exponential growth of B.1.617.2.. Https://t.co/3fmEwU7cP3” / Twitter. (n.d.). Retrieved July 2, 2021, from https://twitter.com/kallmemeg/status/1397981951907217411
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Thushan de Silva on Twitter. (n.d.). Twitter. Retrieved 29 July 2021, from https://twitter.com/Thushan_deSilva/status/1418511974435115011
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twitter.com twitter.com
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Juliet Pulliam, PhD. (2021, June 28). My take (3/4): The last 15 months have been brutal for those of us in SA, as in most of the world. The next few months will continue to try us. Vaccination brings our best hope of making COVID manageable. [Tweet]. @SACEMAdirector. https://twitter.com/SACEMAdirector/status/1409392605901864962
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twitter.com twitter.com
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Elisabeth Mahase. (2021, July 26). At least 6 weeks between Pfizer vaccine doses = higher neutralising antibody levels (than a 3-4 wk interval) For those with the delta variant, antibody levels were 2.3-fold higher with the longer interval Preprint from @pitchstudy @bmjlatest https://t.co/E3yOTqNgpa [Tweet]. @emahase. https://twitter.com/emahase_/status/1419604658344112130
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www.foxnews.com www.foxnews.com
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Staff, Fox News. “McEnany Encourages People to Get COVID Vaccine: It Reduces Your Risk of Transmitting the Virus.” Text.Article. Fox News. Fox News, July 21, 2021. https://www.foxnews.com/media/mcenany-encourages-people-to-get-covid-vaccine-variant.
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Mandavilli, Apoorva. “J.&J. Vaccine May Be Less Effective Against Delta, Study Suggests.” The New York Times, July 20, 2021, sec. Health. https://www.nytimes.com/2021/07/20/health/coronavirus-johnson-vaccine-delta.html.
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www.biorxiv.org www.biorxiv.org
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Tada, Takuya, Hao Zhou, Marie I. Samanovic, Belinda M. Dcosta, Amber Cornelius, Mark J. Mulligan, and Nathaniel R. Landau. “Comparison of Neutralizing Antibody Titers Elicited by MRNA and Adenoviral Vector Vaccine against SARS-CoV-2 Variants.” BioRxiv, July 19, 2021, 2021.07.19.452771. https://doi.org/10.1101/2021.07.19.452771.
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Barouch, Dan H., Kathryn E. Stephenson, Jerald Sadoff, Jingyou Yu, Aiquan Chang, Makda Gebre, Katherine McMahan, et al. “Durable Humoral and Cellular Immune Responses 8 Months after Ad26.COV2.S Vaccination.” New England Journal of Medicine 0, no. 0 (July 14, 2021): null. https://doi.org/10.1056/NEJMc2108829.
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the Guardian. “Australian Medical Association Says NSW Covid Lockdown Failing and Urges Change to AstraZeneca Advice,” July 23, 2021. http://www.theguardian.com/australia-news/2021/jul/23/australian-medical-association-says-nsw-covid-lockdown-failing-and-urges-change-to-astrazeneca-advice.
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Bellafante, Ginia. “How to Survive a Plague, Part 2.” The New York Times, July 23, 2021, sec. New York. https://www.nytimes.com/2021/07/23/nyregion/Covid-Delta-Vaccination-AIDS.html.
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the Guardian. “‘It’s Too Late’: US Doctor Says Dying Patients Begging for Covid Vaccine,” July 22, 2021. http://www.theguardian.com/us-news/2021/jul/22/us-coronavirus-covid-unvaccinated-hospital-rates-vaccines.
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The Jerusalem Post | JPost.com. “Israel Might Soon Decide to Give Booster to the Elderly.” Accessed July 28, 2021. https://www.jpost.com/breaking-news/coronavirus-in-israel-1398-new-cases-208-percent-of-tests-return-positive-674917.
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“Covid-19: CDC Brings Back Indoor Mask Guidance for Virus Hot Spots.” BBC News, July 27, 2021, sec. US & Canada. https://www.bbc.com/news/world-us-canada-57989777.
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SF bar alliance announces policy requiring proof of vaccination. (n.d.). Retrieved July 28, 2021, from https://www.sfgate.com/food/article/bar-alliance-covid-test-vaccination-proof-required-16340670.php
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Why are fully vaccinated people testing positive for Covid? | Financial Times. (n.d.). Retrieved July 28, 2021, from https://www.ft.com/content/0f11b219-0f1b-420e-8188-6651d1e749ff
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Is Covid Coming Back 2021? Delta Variant, New Global Hotspots Are Reality Check—Bloomberg. (n.d.). Retrieved July 28, 2021, from https://www.bloomberg.com/news/articles/2021-07-27/is-covid-coming-back-2021-delta-variant-new-global-hotspots-are-reality-check?srnd=premium-europe&sref=jjXJRDFv
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twitter.com twitter.com
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Alan McNally 💙. (2021, February 5). Our latest lab data for B.1.1.7 prevalence in Pillar 2 samples, as determined by SGTF. Clearly now plateauing at 80-90%. Which to me suggests there are other lineages as transmissible as B.1.1.7......... Https://t.co/toA0GyVsZz [Tweet]. @alanmcn1. https://twitter.com/alanmcn1/status/1357701944027004929
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twitter.com twitter.com
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World Health Organization (WHO). (2021, May 31). Today WHO has announced a new naming system for key #COVID19 variants. The labels are based on the Greek alphabet (i.e. Alpha, Beta, Gamma, etc), making them simple, easy to say and remember. 👉 https://t.co/aYCZfspZyb https://t.co/Gxt14fwVqF [Tweet]. @WHO. https://twitter.com/WHO/status/1399432092333883393
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ReconfigBehSci. (2021, April 8). RT @EricTopol: The variants of concern/interest fall into a spectrum of immune evasiveness, w/ B.1.351 being most; B.1.1.7, B.1.429 least.… [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1397697142769152001
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Seth Trueger. (2021, May 3). Https://t.co/mKCwcjQfe3 [Tweet]. @MDaware. https://twitter.com/MDaware/status/1389244959757373441
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Nick Holliman. (2021, May 30). @anthonybmasters @d_spiegel A quick visual summary of data on this week’s article by @anthonybmasters & @d_spiegel The outlook is uncertain, although we have survived a variant once already (B.1.1.7). The data on the effect of variants is analysed as fast as it (reliably) arrives. Https://t.co/vOKmCxYMGT https://t.co/3ZeJJTdRs3 [Tweet]. @binocularity. https://twitter.com/binocularity/status/1398957348492918784
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Eric Topol. (2021, June 9). Here’s the updated, comprehensive list of #SARSCoV2 variants that are resistant to vaccines https://t.co/JnOz3T7L28 [Tweet]. @EricTopol. https://twitter.com/EricTopol/status/1402752521970458628
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ReconfigBehSci on Twitter: ‘RT @EricTopol: Summed up well by @MollyJongFast, especially for delta, the most challenging one so far https://t.co/cSGekr2q2S’ / Twitter. (n.d.). Retrieved 11 June 2021, from https://twitter.com/SciBeh/status/1403057875254054914
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A Marm Kilpatrick on Twitter: “How effective are vaccines vs severe & all disease, death, infection, & transmission? Very nice collection of studies assessing different aspects of vaccine protection by Julia Shapiro (on twitter?) @nataliexdean @betzhallo @ilongini & 2 others. Thread https://t.co/mhe0DufVtH” / Twitter. (n.d.). Retrieved June 28, 2021, from https://twitter.com/DiseaseEcology/status/1395848357461954563
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Jeffrey Ely on Twitter: “The base-rate fallacy is about to become a daily nuisance when it comes to processing outbreak data in highly vaccinated societies. Here’s a cautionary tale.” / Twitter. (n.d.). Retrieved June 28, 2021, from https://twitter.com/Jeffely/status/1408500890999328770
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Eric Topol on Twitter: “As the Delta variant (B.1.617.2) becomes dominant throughout the world, there are 2 patterns emerging: —Countries w/ low vaccination rates are seeing both case and fatality rates increase—Countries w/ high vaccination rate: Some case increase and minimal to no fatality increase https://t.co/sSE4RlSeUJ” / Twitter. (n.d.). Retrieved June 28, 2021, from https://twitter.com/EricTopol/status/1408195243279667204
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Deepti Gurdasani on Twitter: “I’m still utterly stunned by yesterday’s events—Let me go over this in chronological order & why I’m shocked. - First, in the morning yesterday, we saw a ‘leaked’ report to FT which reported on @PHE_uk data that was not public at the time🧵” / Twitter. (n.d.). Retrieved June 27, 2021, from https://twitter.com/dgurdasani1/status/1396373990986375171
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UK is with EU. (2021, January 18). ..The reason we are in this third lockdown is because of the anti lockdowners like Lord Sumption ..We are going in circles, countries who have done well controlled the virus and now have an economic recovery ..And every life matters #GMB @devisridhar speaking truth to power https://t.co/U3BBV0uUSb [Tweet]. @ukiswitheu. https://twitter.com/ukiswitheu/status/1351089812799950850
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Challen, R., Dyson, L., Overton, C., Guzman-Rincon, L., Danon, L., & Gog, J. (n.d.). Briefing note: Potential community transmission of B.1.617.2 inferred by S-gene positivity. 18.
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Bolze, A., Cirulli, E. T., Luo, S., White, S., Cassens, T., Jacobs, S., Nguyen, J., Ramirez, J. M., Sandoval, E., Wang, X., Wong, D., Becker, D., Laurent, M., Lu, J. T., Isaksson, M., Washington, N. L., & Lee, W. (2021). Rapid displacement of SARS-CoV-2 variant B.1.1.7 by B.1.617.2 and P.1 in the United States [Preprint]. Infectious Diseases (except HIV/AIDS). https://doi.org/10.1101/2021.06.20.21259195
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Parry, H. M., Tut, G., Faustini, S., Stephens, C., Saunders, P., Bentley, C., Hilyard, K., Brown, K., Amirthalingam, G., Charlton, S., Leung, S., Chiplin, E., Coombes, N. S., Bewley, K. R., Penn, E. J., Rowe, C., Otter, A., Watts, R., D’Arcangelo, S., … Moss, P. (2021). BNT162b2 Vaccination in People Over 80 Years of Age Induces Strong Humoral Immune Responses with Cross Neutralisation of P.1 Brazilian Variant. SSRN Electronic Journal. https://doi.org/10.2139/ssrn.3816840
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www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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wo novel pathogenic mutations were identified in BRCA2 genes
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the Guardian. “Have More than 100% of Older People Been Vaccinated? | David Spiegelhalter and Anthony Masters,” June 6, 2021. http://www.theguardian.com/theobserver/commentisfree/2021/jun/06/have-more-than-100-per-cent-of-people-been-vaccinated.
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the Guardian. “Vaccines Are Not Magic Bullets – We’ll Still Have to Take Precautions | Zania Stamataki,” June 22, 2021. http://www.theguardian.com/commentisfree/2021/jun/22/viruses-wearing-mask-england-vaccines.
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osf.io osf.io
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Singh, Urvashi B., Mercy Rophina, Dr Rama Chaudhry, Vigneshwar Senthivel, Kiran Bala, Rahul C. Bhoyar, Bani Jolly, et al. “Variants of Concern Responsible for SARS-CoV-2 Vaccine Breakthrough Infections from India.” OSF Preprints, June 3, 2021. https://doi.org/10.31219/osf.io/fgd4x.
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Naveca, Felipe Gomes, Valdinete Nascimento, Victor Costa de Souza, André de Lima Corado, Fernanda Nascimento, George Silva, Ágatha Costa, et al. “COVID-19 in Amazonas, Brazil, Was Driven by the Persistence of Endemic Lineages and P.1 Emergence.” Nature Medicine, May 25, 2021, 1–9. https://doi.org/10.1038/s41591-021-01378-7.
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Cirillo, Nicola, and Richard Doan. “Bell’s Palsy and SARS-CoV-2 Vaccines—an Unfolding Story.” The Lancet Infectious Diseases 0, no. 0 (June 7, 2021). https://doi.org/10.1016/S1473-3099(21)00273-5.
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Covid variants: How much protection do the different vaccines offer? (2021, June 3). The Guardian. http://www.theguardian.com/world/2021/jun/03/covid-variants-delta-alpha-how-much-protection-vaccines
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Liverpool, M. L. P., Clare Wilson, Jessica Hamzelou, Sam Wong, Graham Lawton, Adam Vaughan, Conrad Quilty-Harper and Layal. (n.d.). Covid-19 news: Delta variant now causing 91 per cent of UK cases. New Scientist. Retrieved 11 June 2021, from https://www.newscientist.com/article/2237475-covid-19-news-delta-variant-now-causing-91-per-cent-of-uk-cases/
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Daniels, Curt J., Saurabh Rajpal, Joel T. Greenshields, Geoffrey L. Rosenthal, Eugene H. Chung, Michael Terrin, Jean Jeudy, et al. “Prevalence of Clinical and Subclinical Myocarditis in Competitive Athletes With Recent SARS-CoV-2 Infection: Results From the Big Ten COVID-19 Cardiac Registry.” JAMA Cardiology, May 27, 2021. https://doi.org/10.1001/jamacardio.2021.2065.
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Eric Topol on Twitter: “New reports on transmissibility and immune evasiveness for delta (B.1.617.2) lead to an update of this Table of the variants and key properties https://t.co/nGzEa39eF4” / Twitter. (n.d.). Retrieved June 5, 2021, from https://twitter.com/EricTopol/status/1400590583274426370
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en.wikipedia.org en.wikipedia.org
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The terms autonym and xenonym also had different applications,[3] thus leaving endonym and exonym as the preferred forms.
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Mahase, E. (2021). Covid-19: Government faces legal challenge over alleged suppression of school data. BMJ, 373, n1408. https://doi.org/10.1136/bmj.n1408
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docs.gitlab.com docs.gitlab.com
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We want the GraphQL API to be the primary means of interacting programmatically with GitLab. To achieve this, it needs full coverage - anything possible in the REST API should also be possible in the GraphQL API.
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- May 2021
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Mallapaty, S. (2021). India’s neighbours race to sequence genomes as COVID surges. Nature, 593(7860), 485–486. https://doi.org/10.1038/d41586-021-01287-2
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Prof. Christina Pagel on Twitter: “So Hancock confirms that B.1.617.2 (‘India’ variant) is now dominant in England. Harries says we must remain ‘vigilant’. What does vigilant even mean? That we watch very carefully as a new, more dangerous, variant takes over cos it was so fun last time? Yeah, I’m pissed off” / Twitter. (n.d.). Retrieved May 28, 2021, from https://twitter.com/chrischirp/status/1397951741283405825
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Here’s why schools should be on alert over new coronavirus variants—CNN. (n.d.). Retrieved May 28, 2021, from https://edition.cnn.com/2021/05/26/world/coronavirus-variant-schools-cmd-intl/index.html
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The UK’s coronavirus policy still places too much responsibility—And blame—On the public—The BMJ. (n.d.). Retrieved May 27, 2021, from https://blogs.bmj.com/bmj/2021/05/26/the-uks-coronavirus-policy-still-places-too-much-responsibility-and-blame-in-the-hands-of-the-public/?utm_source=twitter&utm_medium=social&utm_term=hootsuite&utm_content=sme&utm_campaign=usage
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www.bmj.com www.bmj.com
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Iacobucci, G. (2021). Covid-19: Single vaccine dose is 33% effective against variant from India, data show. BMJ, n1346. https://doi.org/10.1136/bmj.n1346
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Mallapaty, S. (2021). Scientists zero in on long-sought marker of COVID-vaccine efficacy. Nature, d41586-021-01372–01376. https://doi.org/10.1038/d41586-021-01372-6
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Adam, D. (2021). What scientists know about new, fast-spreading coronavirus variants. Nature. https://doi.org/10.1038/d41586-021-01390-4
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www.nature.com www.nature.com
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Richardson, H. (2021). How waste water is helping South Africa fight COVID-19. Nature, 593(7860), 616–617. https://doi.org/10.1038/d41586-021-01399-9
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www.theguardian.com www.theguardian.com
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No 10 ‘tried to block’ data on spread of new Covid variant in English schools | Coronavirus | The Guardian. (n.d.). Retrieved May 24, 2021, from https://www.theguardian.com/world/2021/may/22/no-10-tried-to-block-data-on-spread-of-new-covid-variant-in-english-schools
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www.theguardian.com www.theguardian.com
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Ministers ‘failed to act on Bedford Covid variant surge for two weeks’ | Coronavirus | The Guardian. (n.d.). Retrieved May 24, 2021, from https://www.theguardian.com/world/2021/may/23/ministers-failed-to-act-on-bedford-covid-variant-surge-for-two-weeks
Tags
- COVID-19
- epidemiology
- sewage
- lang:en
- is:news
- UK
- Bedford
- prevention
- variant
- wastewater
- intervention
- Indian variant
- government
- response
- detection
- travel ban
Annotators
URL
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www.bbc.co.uk www.bbc.co.uk
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Covid: India tells social media firms to remove ‘India variant’ from content. (2021, May 22). BBC News. https://www.bbc.com/news/world-asia-india-57213046
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www.thelancet.com www.thelancet.com
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Ramanathan, M., Ferguson, I. D., Miao, W., & Khavari, P. A. (2021). SARS-CoV-2 B.1.1.7 and B.1.351 spike variants bind human ACE2 with increased affinity. The Lancet Infectious Diseases, 0(0). https://doi.org/10.1016/S1473-3099(21)00262-0
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www.biorxiv.org www.biorxiv.org
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Israelow, B., Mao, T., Klein, J., Song, E., Menasche, B., Omer, S. B., & Iwasaki, A. (2021). Adaptive immune determinants of viral clearance and protection in mouse models of SARS-CoV-2. BioRxiv, 2021.05.19.444825. https://doi.org/10.1101/2021.05.19.444825
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twitter.com twitter.com
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John Burn-Murdoch. (2021, May 7). NEW: time for a proper thread on B.1.617.2, the subtype of the Indian variant that has been moved to ‘variant of concern’ today by Public Health England. First, it’s clear case numbers from this lineage are growing faster than other imported variants have done in the UK. https://t.co/hUUzBvCsY1 [Tweet]. @jburnmurdoch. https://twitter.com/jburnmurdoch/status/1390666071724765185
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twitter.com twitter.com
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Prof. Christina Pagel on Twitter: “SHORT THREAD: I was on Sky News earlier where I explained why I thought test 4 (new variant test) for the next stage of the roadmap had not been met, because of B.1.617.2 (the so called ‘Indian’ variant of concern). 1/5 https://t.co/0O3dL2saOR” / Twitter. (n.d.). Retrieved May 17, 2021, from https://twitter.com/chrischirp/status/1392927819504701441
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www.theguardian.com www.theguardian.com
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the Guardian. “How Good Are We at Predicting the Pandemic? | David Spiegelhalter & Anthony Masters,” May 9, 2021. http://www.theguardian.com/theobserver/commentisfree/2021/may/09/how-good-are-we-at-predicting-pandemic.
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www.nature.com www.nature.com
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Mallapaty, S. (2021). How a worrisome coronavirus variant spread unnoticed. Nature. https://doi.org/10.1038/d41586-021-01285-4
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twitter.com twitter.com
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Eric Topol. (2021, May 1). Downgrading the concern on B.1.617, the poorly named ‘double mutant’—98% effectiveness of mRNA vaccine in an Israeli outbreak @CT_Bergstrom https://t.co/tGbuwPUmAL —Lab studies: Minimal immune evasion, expected full protection from vaccine @GuptaR_lab https://t.co/AIp24G0ROK https://t.co/AK20UWlDBD [Tweet]. @EricTopol. https://twitter.com/EricTopol/status/1388539223230140422
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Government to launch 40,000 person daily contact testing study. (n.d.). GOV.UK. Retrieved 13 May 2021, from https://www.gov.uk/government/news/government-to-launch-40000-person-daily-contact-testing-study
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twitter.com twitter.com
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Dr. Tom Frieden. (2021, April 30). Globally, the end of the pandemic isn’t near. More than a million lives depend on improving our response quickly. Don’t be blinded by the light at the end of the tunnel. There isn’t enough vaccine and the virus is gathering strength & speed. Global cooperation is crucial. 1/ [Tweet]. @DrTomFrieden. https://twitter.com/DrTomFrieden/status/1388172436999376899
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twitter.com twitter.com
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ReconfigBehSci. (2021, May 1). RT @GuptaR_lab: Given the dire situation in India and questions regarding the new variant B.1.617, the so called ‘Double Mutant’ we are sha… [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1388915829383720961
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www.scientificamerican.com www.scientificamerican.com
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Brazil’s Pandemic Is a “Biological Fukushima” That Threatens the Entire Planet—Scientific American. (n.d.). Retrieved May 12, 2021, from https://www.scientificamerican.com/article/brazils-pandemic-is-a-lsquo-biological-fukushima-rsquo-that-threatens-the-entire-planet/
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Vaughan, A. (2021, May 10). Indian coronavirus variant in the UK seems to be more transmissible. New Scientist. https://www.newscientist.com/article/2277153-indian-coronavirus-variant-in-the-uk-seems-to-be-more-transmissible/
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the Guardian. “Brazil Variant Evaded up to 61% of Immunity in Previous Covid Cases,” March 2, 2021. http://www.theguardian.com/world/2021/mar/02/brazil-variant-evaded-immunity-previous-covid-cases.
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New concerns as Indian Covid variant clusters found across England | Coronavirus | The Guardian. (n.d.). Retrieved May 7, 2021, from https://www.theguardian.com/world/2021/may/06/new-concerns-indian-covid-variant-clusters-found-across-england-ongoing-risk-high
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dash.harvard.edu dash.harvard.edu
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Kissler, S., Fauver, J. R., Mack, C., Tai, C. G., Breban, M. I., Watkins, A. E., Samant, R. M., Anderson, D. J., Ho, D. D., Grubaugh, N. D., & Grad, Y. (2021). Densely sampled viral trajectories suggest longer duration of acute infection with B.1.1.7 variant relative to non-B.1.1.7 SARS-CoV-2. https://dash.harvard.edu/handle/1/37366884
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The UK has record death tolls, yet still the government has no clear Covid strategy | Helen Ward. (2021, January 21). The Guardian. http://www.theguardian.com/commentisfree/2021/jan/21/uk-record-death-tolls-no-clear-covid-strategy
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www.thelancet.com www.thelancet.com
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Diseases, T. L. I. (2021). An exceptional vaccination policy in exceptional circumstances. The Lancet Infectious Diseases, 21(2), 149. https://doi.org/10.1016/S1473-3099(21)00008-6
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virological.org virological.org
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Genomic characterisation of an emergent SARS-CoV-2 lineage in Manaus: Preliminary findings - SARS-CoV-2 coronavirus / nCoV-2019 Genomic Epidemiology. (2021, January 25). Virological. https://virological.org/t/genomic-characterisation-of-an-emergent-sars-cov-2-lineage-in-manaus-preliminary-findings/586/2
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Eric Topol. (2021, February 17). New reports @NEJM today confirming some immune evasion of the B.1.351 variant (identified in South Africa) to both the mRNA vaccines, in vitro data @BioNTech_Group/@Pfizer and @moderna_tx. Less vaccine efficacy vs B.1.351 has been confirmed in clinical trials for 3 vaccines https://t.co/2N7eKDllso [Tweet]. @EricTopol. https://twitter.com/EricTopol/status/1362160675913568256
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Anthes, E. (2021, May 5). Pfizer-BioNTech Vaccine is Highly Effective Against Variants, Studies Find. The New York Times. https://www.nytimes.com/2021/05/05/health/coronavirus-pfizer-vaccine-variants.html
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Mandavilli, A. (2021, May 3). Reaching ‘Herd Immunity’ Is Unlikely in the U.S., Experts Now Believe. The New York Times. https://www.nytimes.com/2021/05/03/health/covid-herd-immunity-vaccine.html
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Variants, 3 New Covid Vaccines, and Contested Efficacy Claims: A Month of Seismic Shifts and Confusion. (2021, January 31). Absolutely Maybe. https://absolutelymaybe.plos.org/2021/01/31/variants-3-new-covid-vaccines-and-contested-efficacy-claims-a-month-of-seismic-shifts-and-confusion/
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NERVTAG paper on COVID-19 variant of concern B.1.1.7. (n.d.). GOV.UK. Retrieved March 1, 2021, from https://www.gov.uk/government/publications/nervtag-paper-on-covid-19-variant-of-concern-b117
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Beale, R. (2021, February 19). Eeek! London Review of Books, 43(05). https://www.lrb.co.uk/the-paper/v43/n05/rupert-beale/eeek
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science.sciencemag.org science.sciencemag.org
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Faria, N. R., Mellan, T. A., Whittaker, C., Claro, I. M., Candido, D. da S., Mishra, S., Crispim, M. A. E., Sales, F. C. S., Hawryluk, I., McCrone, J. T., Hulswit, R. J. G., Franco, L. A. M., Ramundo, M. S., Jesus, J. G. de, Andrade, P. S., Coletti, T. M., Ferreira, G. M., Silva, C. A. M., Manuli, E. R., … Sabino, E. C. (2021). Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil. Science. https://doi.org/10.1126/science.abh2644
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ChAdOx1 nCov-19 provides minimal protection against mild-moderate COVID-19 infection from B.1.351 coronavirus variant in young South African adults | University of Oxford. (n.d.). Retrieved February 18, 2021, from https://www.ox.ac.uk/news/2021-02-07-chadox1-ncov-19-provides-minimal-protection-against-mild-moderate-covid-19-infection
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Staff, R. (2021, February 6). AstraZeneca thinks shot can stop severe disease from South Africa COVID variant. Reuters. https://www.reuters.com/article/uk-health-coronavirus-astrazeneca-respon-idUKKBN2A60S2
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Steinhauser, G. (2021, February 7). Rollout of AstraZeneca Covid-19 Vaccine Halted in South Africa After Study. Wall Street Journal. https://www.wsj.com/articles/astrazeneca-vaccine-doesnt-protect-against-mild-and-moderate-cases-from-south-africa-strain-11612700385
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papers.ssrn.com papers.ssrn.com
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Emary, K. R. W., Golubchik, T., Aley, P. K., Ariani, C. V., Angus, B. J., Bibi, S., Blane, B., Bonsall, D., Cicconi, P., Charlton, S., Clutterbuck, E., Collins, A. M., Cox, T., Darton, T., Dold, C., Douglas, A. D., Duncan, C. J. A., Ewer, K., Flaxman, A., … Group, O. C. V. T. (2021). Efficacy of ChAdOx1 nCoV-19 (AZD1222) Vaccine Against SARS-CoV-2 VOC 202012/01 (B.1.1.7) (SSRN Scholarly Paper ID 3779160). Social Science Research Network. https://doi.org/10.2139/ssrn.3779160
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Lu, D. (n.d.). Australia clamps down in response to cases of UK coronavirus variant. New Scientist. Retrieved February 23, 2021, from https://www.newscientist.com/article/2264588-australia-clamps-down-in-response-to-cases-of-uk-coronavirus-variant/
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Stolberg, S. G., & Zimmer, C. (2021, April 7). More Contagious Virus Variant Is Now Dominant in U.S., C.D.C. Chief Says. The New York Times. https://www.nytimes.com/2021/04/07/us/politics/coronavirus-variants-cdc.html
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ReconfigBehSci. (2021, April 18). RT @jcbarret: A few thoughts on the B.1.617 variant, first seen in India in late 2020, recently seen in >100 cases in the UK, and very much… [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1384128233348558856
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- Apr 2021
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www.theguardian.com www.theguardian.com
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Roy, A. (2021, April 29). ‘We are witnessing a crime against humanity’: Arundhati Roy on India’s Covid catastrophe. The Guardian. https://www.theguardian.com/news/2021/apr/28/crime-against-humanity-arundhati-roy-india-covid-catastrophe
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twitter.com twitter.com
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Eric Topol on Twitter: “The variants of concern/interest fall into a spectrum of immune evasiveness, w/ B.1.351 being most; B.1.1.7, B.1.429 least. This property pertains to potential for reinfection & some reduction in vaccine efficacy My prelim estimates based on publications/preprints, subject to Δ https://t.co/fQZwBCUEGS” / Twitter. (n.d.). Retrieved April 28, 2021, from https://twitter.com/EricTopol/status/1380203664317456385
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twitter.com twitter.com
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ReconfigBehSci. (2021, April 13). RT @JoshBiostats: Important comment by @_nickdavies here: New studies are compatible with B.1.1.7 having higher severity because new studie… [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1381927390633410562
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investors.modernatx.com investors.modernatx.com
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Moderna Provides Clinical and Supply Updates on COVID-19 Vaccine Program Ahead of 2nd Annual Vaccines Day. (2021, April 13). Moderna, Inc. https://investors.modernatx.com/news-releases/news-release-details/moderna-provides-clinical-and-supply-updates-covid-19-vaccine
Tags
- moderna
- COVID-19
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www.propublica.org www.propublica.org
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Chen, C. (2021, April 14). A Tiny Number of People Will Be Hospitalized Despite Being Vaccinated. We Have to Learn Why. ProPublica. https://www.propublica.org/article/a-tiny-number-of-people-will-be-hospitalized-despite-being-vaccinated-we-have-to-learn-why?token=4HsRcuNGpEdmAeWz4oEu5Cr56zj5_5OE
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www.thelancet.com www.thelancet.com
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Tan, Steph H., Orchid Allicock, Mari Armstrong-Hough, and Anne L. Wyllie. ‘Saliva as a Gold-Standard Sample for SARS-CoV-2 Detection’. The Lancet Respiratory Medicine 0, no. 0 (19 April 2021). https://doi.org/10.1016/S2213-2600(21)00178-8.
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Merrick, J. (2021, April 20). Covid-19 variants: South African strain is causing the most concern for UK scientists. iNews. https://inews.co.uk/news/politics/covid-19-variants-south-african-strain-is-causing-the-most-concern-for-uk-scientists-965679?utm_term=Autofeed&ito=social_itw_theipaper&utm_medium=Social&utm_source=Twitter#Echobox=1618951521
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www.theguardian.com www.theguardian.com
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Safi, M. (2021, April 21). India’s shocking surge in Covid cases follows baffling decline. The Guardian. https://www.theguardian.com/world/2021/apr/21/india-shocking-surge-in-covid-cases-follows-baffling-decline
Tags
- COVID-19
- infection
- epidemiology
- surge
- lang:en
- is:news
- shortage
- fatality
- wave
- delhi
- variant
- public health
- science
- population
- social distancing
- oxygen
- mutation
- india
Annotators
URL
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