--novel-splicesite-outfile
use to collect coordinates of identified IES
4 Matching Annotations
- Sep 2016
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ccb.jhu.edu ccb.jhu.eduHISAT24
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--max-intronlen
set to 1000: max IES length <1000bp
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--min-intronlen
default acceptable: 26bp is minimal IES length, 20bp is minimal intron length
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--pen-noncansplice
set to zero
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