Developmental delay
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001263
Developmental delay
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001263
allele id lookup result: https://reg.clinicalgenome.org/redmine/projects/registry/genboree_registry/by_caid?caid=CA915940579
allele id lookup result: https://reg.clinicalgenome.org/redmine/projects/registry/genboree_registry/by_caid?caid=CA411033555
variant id lookup result: https://www.ncbi.nlm.nih.gov/clinvar/variation/72912/
axial muscle weakness
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0003327
Gowers’ sign
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0003391
allele id lookup result: https://reg.clinicalgenome.org/redmine/projects/registry/genboree_registry/by_caid?caid=CA414193321
Arachnodactyly
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001166
Camptodactyly
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0012385
Joint laxity
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001388
Slender limbs
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001533
Pectus
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000768
Pectus
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000767
Scoliosis
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0002650
Tall stature
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000098
atrial septal defect
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001631
large ears
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000400
Open mouth appearance
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000194
Short philtrum
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000322
Long face
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000276
Hypotonia
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001290
intellectual disability
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001249
Developmental delay
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001263
Blood
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0410211
fiber degeneration
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0100295
allele id lookup result: https://reg.clinicalgenome.org/redmine/projects/registry/genboree_registry/by_caid?caid=CA915940549
allele id lookup result: http://reg.clinicalgenome.org/redmine/projects/registry/genboree_registry/by_caid?caid=CA398917343
allele id lookup result: http://reg.clinicalgenome.org/redmine/projects/registry/genboree_registry/by_caid?caid=CA399189115
allele id lookup result: http://reg.clinicalgenome.org/redmine/projects/registry/genboree_registry/by_caid?caid=CA399196709
allele id lookup result: http://reg.clinicalgenome.org/redmine/projects/registry/genboree_registry/by_caid?caid=CA398915284
allele id lookup result: http://reg.clinicalgenome.org/redmine/projects/registry/genboree_registry/by_caid?caid=CA399193661
allele id lookup result: http://reg.clinicalgenome.org/redmine/projects/registry/genboree_registry/by_caid?caid=CA399185143
down-slanting eyelid
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0200006
short proximal extremities
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0009815
3
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001947
3
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001942
8
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001763
5
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001763
8
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001382
5
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001382
4
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0002415
6
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000175
8
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0002705
5
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0002705
3
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0002705
6
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000369
5
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000369
3
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000369
3
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000325
3
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000322
2
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0005280
6
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000316
8
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000348
6
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000348
5
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000348
3
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000348
6
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0002003
2
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0002003
macrocephaly
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000256
macrocephaly
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000256
macrocephaly
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000256
7
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000717
2
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000717
5
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000736
1
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000736
5
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0007018
1
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0007018
5
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001265
1
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000639
1
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000540
1
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000505
1
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000407
muscular hypotonia
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001252
muscular hypotonia
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001252
muscular hypotonia
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001252
muscular hypotonia
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001252
muscular hypotonia
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001252
muscular hypotonia
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001252
seizures
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001250
intellectual disability
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001249
intellectual disability
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001249
intellectual disability
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001249
intellectual disability
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001249
motor development
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001270
motor development
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001270
motor development
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001270
motor development
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001270
motor development
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001270
motor development
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001270
speech and language development
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000750
speech and language development
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000750
speech and language development
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000750
speech and language development
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000750
speech and language development
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000750
developmental delay
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001263
developmental delay
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001263
developmental delay
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001263
developmental delay
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001263
developmental delay
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001263
developmental delay
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001263
allele id lookup result: http://reg.clinicalgenome.org/redmine/projects/registry/genboree_registry/by_caid?caid=CA399193709
variant id lookup result: https://www.ncbi.nlm.nih.gov/clinvar/variation/692266/
variant id lookup result: https://www.ncbi.nlm.nih.gov/clinvar/variation/692269/
variant id lookup result: https://www.ncbi.nlm.nih.gov/clinvar/variation/692269/
variant id lookup result: https://www.ncbi.nlm.nih.gov/clinvar/variation/692266/
variant id lookup result: https://www.ncbi.nlm.nih.gov/clinvar/variation/692268/
allele id lookup result: http://reg.clinicalgenome.org/redmine/projects/registry/genboree_registry/by_caid?caid=CA8805224
primary infertility
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0003251
variant id lookup result: https://www.ncbi.nlm.nih.gov/clinvar/variation/692266/
variant id lookup result: https://www.ncbi.nlm.nih.gov/clinvar/variation/692266/
General hypotonia
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001290
General hypotonia
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001290
acute respiratory failure
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0002093
54.0 cm (99th percentile)
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0003517
2 cm (in acute setting)
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001744
hyperechoic cortex of both kidneys
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0004719
aortic insufficiency
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001659
+
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0003170
+
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0003170
Platyspondyly
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000926
+
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001395
+
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001397
+
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001397
<3rd percentile
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0004322
variant id lookup result: https://www.ncbi.nlm.nih.gov/clinvar/variation/547946/
variant id lookup result: https://www.ncbi.nlm.nih.gov/clinvar/variation/692227/
variant id lookup result: https://www.ncbi.nlm.nih.gov/clinvar/variation/547947/
variant id lookup result: https://www.ncbi.nlm.nih.gov/clinvar/variation/547947/
variant id lookup result: https://www.ncbi.nlm.nih.gov/clinvar/variation/599396/
variant id lookup result: https://www.ncbi.nlm.nih.gov/clinvar/variation/692228/
Splenomegaly
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0006268
<3rd percentile
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0004322
elevated methionine
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0003235
talipes equinovarus
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001762
Neonatal jaundice
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0006579
failure to thrive
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001508
hyperkinetic
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0002487
nystagmus
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000639
right esotropia
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000565
cortical edema
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0002181
downward gaze deviation
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0025330
tongue thrusting
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0100703
axial hypotonia
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0008936
appendicular spasticity
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001257
could not verbalize
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0002300
lost voluntary mobility
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0003470
bilateral nonsynchronous spikes
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0002353
short non-provoked generalized tonic-clonic seizures
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0002069
intractable epilepsy
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001250
ataxia
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001251
atrophy
Monarch lookup result: https://monarchinitiative.org/phenotype/HP%3A0003202
progressive muscle weakness
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0003323
Small head circumference
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000252
Speech delay
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000750
ID
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001249
hypertrophy of slow fibres
Monarch lookup result: https://monarchinitiative.org/phenotype/HP%3A0100293
fibre degeneration
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0100295
interstitial fibrosis
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0002206
hypertrophy of Type 1 (slow) fibres
Monarch lookup result: https://monarchinitiative.org/phenotype/HP%3A0100293
nemaline rods
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0003798
selective and marked atrophy of Type 2 (fast) fibres
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0003554
nasogastric tube feedin
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0040288
bulbar weakness
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001283
non-invasive ventilation
Monarch lookup result: https://monarchinitiative.org/phenotype/HP%3A0004887
respiratory muscle weakness
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0002747
thoracic scoliosis
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0002943
thoracic scoliosis
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0002943
bilateral hip dislocation
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0008780
finger contractures
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0005879
knee contractures
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0006380
high arched palate
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000218
hypotonia
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001252
limb muscles
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0009028
weakness of facial
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0030319
rocker-bottom
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001838
bilateral talipes
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001776
overlapping digits
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0010557
overlapping digits
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001845
polyhydramnios
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001561
aminoaciduria
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0003355
aspartate level
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0010899
obsessive-compulsive trait
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0008770
kidney stones
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0000787
variant id lookup result: https://www.ncbi.nlm.nih.gov/clinvar/variation/559601/
allele id lookup result: https://reg.clinicalgenome.org/redmine/projects/registry/genboree_registry/by_caid?caid=CA346813374
allele id lookup result: https://reg.clinicalgenome.org/redmine/projects/registry/genboree_registry/by_caid?caid=CA346764646
if n is very small (for example n = 3), rather than showing error bars and statistics, it is better to simply plot the individual data points.
allele id lookup result
Seizures
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0001250
22 mo
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0031936
variant id lookup result
constipation
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0002019
hairy elbows
Monarch lookup result: https://monarchinitiative.org/phenotype/HP:0004780
I 1
CaseI1-2: Case I1 is the asymptomatic paternal grandfather of proband 2 in family 2. The heterozygous Thr295Ile substitution was found in this individual.
CasePresentingHPOs: HP:0005543, (Reduced protein C activity)
HPOsFreeText: Protein C activity was reduced: Normal range = 70-140% (actual = 39%). Patient also had reduced protein C antigen: Normal range = 70-130% (Actual=36%).
CaseNotHPOs:
NotHPOsFreeText:
CaseAddInfo: This individual was asymptomatic.
CasePMIDs:
grandmother (I3) of Proband 2
CaseI3-2: Case I3 is the asymptomatic grandmother of proband 2 in family 2. The heterozygous Leu-34Pro substitution was found in this individual.
CasePresentingHPOs: HP:0005543, (Reduced protein C activity)
HPOsFreeText: Protein C activity was reduced: Normal range = 70-140% (actual = 48%). Patient also had reduced protein C antigen: Normal range = 70-130% (Actual=36%).
CaseNotHPOs:
NotHPOsFreeText:
CaseAddInfo: This individual was asymptomatic.
CasePMIDs:
asymptomaticmother (II4
CaseII4-2: Case II4 is the asymptomatic mother of proband 2 in family 2. The heterozygous Leu-34Pro substitution was found in this individual.
CasePresentingHPOs: HP:0005543, (Reduced protein C activity)
HPOsFreeText: Protein C activity was reduced: Normal range = 70-140% (actual = 55%). Patient also had reduced protein C antigen: Normal range = 70-130% (Actual=34%).
CaseNotHPOs:
NotHPOsFreeText:
CaseAddInfo: This individual was asymptomatic.
CasePMIDs:
paternal relatives II2
CaseII2-2: Case II2 is the asymptomatic paternal uncle of proband 2 in family 2. The Thr295Ile substitution was found in this individual.
CasePresentingHPOs: HP:0005543, (Reduced protein C activity)
HPOsFreeText: Protein C activity was reduced: Normal range = 70-140% (actual = 44%). Patient also had reduced protein C antigen: Normal range = 70-130% (Actual=33%).
CaseNotHPOs:
NotHPOsFreeText:
CaseAddInfo: This individual was completely asymptomatic.
CasePMIDs:
he asymptomatic fatherof Proband 2 (II3)
CaseII3-2: Case II3 is the clinically asymptomatic father of proband 2 in family 2. The Thr295Ile substitution was found in this individual.
CasePresentingHPOs: HP:0005543, (Reduced protein C activity)
HPOsFreeText: Protein C activity was reduced: Normal range = 70-140% (actual = 43%). Patient also had reduced protein C antigen: Normal range = 70-130% (Actual=34%).
CaseNotHPOs:
NotHPOsFreeText:
CaseAddInfo: This individual was completely asymptomatic.
CasePMIDs:
Proband 2
CaseIII1-2: Proband 2 (Case III 1 family 2) was a 19 year old male diagnosed with deep vein thrombosis in both legs since the age of 16. The family of this individual was asymptomatic with respect to thrombolytic disease and was non-consanguineous.
CasePresentingHPOs: HP:0002625, HP:0005543, HP:0004936, (Deep venous thrombosis), (Protein C deficiency), (Venous thrombosis),
HPOsFreeText: Deep vein thrombosis was in both legs since age of 16. This patient also had low protein C antigen.
CaseNotHPOs:
NotHPOsFreeText:
CaseAddInfo: This Case (Case III1-2) was designated as Proband 2.
CasePMIDs:
the father (I1) of Proband 1
CaseI1-1: Case I1-1 is a 54 year-old male from Family 1. This individual has a heterozygous Asp255His mutation and is the father of the proband (II1-1). This individual was asymptomatic and lab results were within normal ranges.
CasePresentingHPOs:
HPOsFreeText:
CaseNotHPOs:
NotHPOsFreeText: Patient was completely asymptomatic.
CaseAddInfo:
CasePMIDs: