10 Matching Annotations
  1. Oct 2026
    1. Case Description

      Case#: Ma_Proband

      Demographics: east Asian? referenced in passing in discussion section

      CasePresentingHPOs: HP:0003182, HP:0008812, HP:0002655, HP:0003621, HP:0000943, HP:0001498, HP:0003049, HP:0002857, HP:0004689,

      CaseNotHPOs: HP:0008445, HP:0002751, HP:0000768, HP:0008445

      CasePreviousTesting: Previous diagnosis Developmental dysplasia of the hip (DDH)

      CaseMethod1: quantify urinary excretion of glycosaminoglycans using dimethylmethylene blue

      CaseMethod2:

      CaseGenotypingMethod: Whole exome sequencing

      Variant HGVS: 1) NM_000512.5:c.1156C>T 2) NM_000512.5:c.1288C>G

      ClinVar: 1) 700 2) N/A

      CAID: 1) CA221040 2) CA397096290

      gnomAD v2: 1) 16-88891261-G-A 2) N/A

      VariantEvidence:

      CaseAddInfo: Onset of symptoms age 8, compound het

      CasePMIDs:

    2. Laboratory tests, the pedigree of the patient, and sequencing information. (A) Proband is a 17-year-old woman with a major complaint of progressive walking pain in bilateral hips which gradually disabled her from any motion of lower extremities since the clinical manifestation debuted at her age of 8. We discovered compound heterozygous variants at exon 11 (c.1156C>T; blue arrows) and exon 12 (c.1288C>G; red arrows) of the GALNS gene, respectively. The sequencing results indicate both parents are respective carriers and each donated a different heterozygous allele. (B) Urinary GAG/Creatinine (mg/mmol) was measured using samples collected from MPS IVA patient and their family members during hospital visits.

      Family#PresentingHPOs: None

      FamilyNotHPOs: Free of clinical phenotypes

      CountryOrigin: China

      Ethnicity: Chinese

      Race: east Asian

      Family#GenotypingMethod: Whole exome sequencing

      Affected: None reported

      Unaffected: mother and maternal grandmother carriers of same allele, father carrier for separate allele

      Segregations: 2?

      PublishedLOD: N/A

      eLOD: too few segregations

      AddSegregationInfo:

      ProbandLabel: Ma_Proband

      Variant: Maternal - NM_000512.5:c.1288C>G Paternal - NM_000512.5:c.1156C>T

      ClinVar:

      CAID:

      gnomAD:

      FamilyAddInfo: paternal allele is previously reported as pathogenic, maternal allele and has only been reported in one proband/family

      FamilyPMIDs: 34557487