865 Matching Annotations
  1. Feb 2016
    1. structural acquisitions included a conventional T1-weighted sagittal scout series, a proton density/T2-weighted interleaved double-echo axial series, and a three-dimensional inversion recovery-prepped spoiled grass coronal series.

      AcquisitionType: MRI AcquisitionInstance: conventional T1-weighted sagittal scout series AcquisitionInstance: proton density/T2-weighted interleaved double-echo axial series AcquisitionInstance: three-dimensional inversion recovery-prepped spoiled grass coronal series

    2. Socioeconomic status was assessed using the Hollingshead Scale. Onset of the disorder, number of episodes, and duration of illness were also obtained. Measures of psychopathology were obtained using the Mania Rating Scale (MRS),37,38 including the psychosis items, and the Global Assessment of Functioning (GAF).

      AcquisitionType: Clinical AcquisitionInstance: Hollingshead Scale AcquisitionInstance: Onset of the disorder AcquisitionInstance: Number of episodes AcquisitionInstance: Duration of illness AcquisitionInstance: Mania Rating Scale (MRS) AcquisitionInstance: Global Assessment of Functioning (GAF)

    3. All children, including the HCs, underwent diagnostic semistructured (Kiddie Schedule for Affective Disorders and Schizophrenia: Epidemiologic Version—KSADS-E)34 and clinical interviews by board-certified child psychiatrists. Each child received a physical and neurological examination (including Tanner Staging: a I–V scale of pubertal development).35,36 Additionally, parents were administered an indirect KSADS-E regarding their children (see Frazier et al12 for more detail).

      AcquisitionType: Clinical Data AcquisitionInstance: Kiddie Schedule for Affective Disorders and Schizophrenia: Epidemiologic Version—KSADS-E AcquisitionInstance: Physical Examination AcquisitionInstance: Neurological Examination AcquisitionInstance: Tanner Staging AcquisitionInstance: indirect KSADS-E

    4. Exclusion criteria in both groups included presence of major sensorimotor handicaps; full-scale IQ < 70; presence of documented learning disabilities; history of claustrophobia, autism, anorexia, bulimia nervosa, alcohol or drug dependence or abuse (in the 2 months prior to the scan or total past history of 12 months or greater); active medical or neurological disease; presence of metal fragments or implants; history of electroconvulsive therapy; and current pregnancy or lactation.

      subject characteristics - exclusion criteria - general

    5. we predicted, based on previous reports, that youths with BPD would have abnormal NA volumes22,23 and that youths with SZ would have reduced thalamic volumes.24,33 We also predicted that the BPD with psychosis group would share features with the BPD without psychosis and the primary psychotic disorder groups
    6. This study investigated the volumetric differences in subcortical gray matter volumes, particularly the amygdala and the hippocampus, in early-onset BPD without psychosis, BPD with psychosis, and SZ in order to elucidate the diagnostic specificity of patterns of subcortical neural abnormality. In addition, this study evaluated diagnosis-by-sex interactions to understand the influence of sexual dimorphism on the limbic structures.

      Objective

    7. youths with BPD with and without psychosis had increased right and left NA volumes, with a moderate effect size compared with the other groups

      result summary

    8. We found that males with SZ had smaller left amygdala volumes relative to other groups and that females with BPD had the smallest left hippocampus.

      result summary

    9. When diagnosis-by-sex interactions were evaluated, males with SZ had the smallest left amygdala and females with BPD had the smallest left hippocampus.

      result summary

    10. these data suggest that specific subcortical brain regions are differentially affected in early-onset BPD and SZ, perhaps suggesting that these are disease-specific abnormalities.

      Inference

    11. We also found that the youths with BPD with psychosis only shared findings with the BPD without psychosis and not with the primary psychotic disorder group

      result summary

    12. Diagnostic and Sex Effects on Limbic Volumes in Early-Onset Bipolar Disorder and Schizophrenia

      This paper is one of the CANDIShare3 prototype articles. CANDIShare3 aims to provide a fully marked-up version of the child psychiatry neuroimaging literature.

  2. Nov 2015
    1. Neurotypical Group473013R46Inferior Frontal Gyrus49832R9Inferior Frontal Gyrus−431033L9Middle Frontal Gyrus35153R6Middle Frontal Gyrus32144R8Cingulate gyrus71830R8Medial Frontal Gyrus33−6445R7Superior Parietal Lobule−29−5945L7Superior Parietal LobuleAutism Group422823R46Middle Fontal Gyrus40240R47Inferior Frontal Gyrus50727R9Inferior Frontal Gyrus−31 265L45Inferior Frontal Gyrus102241R32Cingulate Gyrus29−7142R19Precuneus−23−6143L7Superior Parietal Lobule31−78−2R18Inferior Occipital Gyrus36−3942R40Inferior Parietal Lobule−33−65−3L19Fusiform Gyrus

      Foci of activation table

  3. Oct 2015
    1. pip install numpy scipy && pip install nipype nibabel nitime pyyaml pandas

      for me, I get an error: Could not find a version that satisfies the requirement nipype (from versions: ) No matching distribution found for nipype

    2. python setup.py install

      this didn;t work for me :-(

      Error: Traceback (most recent call last): File "setup.py", line 39, in <module> main() File "setup.py", line 5, in main from setuptools import setup ImportError: No module named setuptools

  4. Sep 2015
    1. Neurotypical group473013R46Inferior frontal gyrus49832R9Inferior frontal gyrus− 43033L9Middle frontal gyrus35153R6Middle frontal gyrus32144R8Cingulate gyrus71830R8Medial frontal gyrus33− 6445R7Superior parietal lobule− 29− 5945L7Superior parietal lobuleAutism group422823R46Middle frontal gyrus40240R47Inferior frontal gyrus50727R9Inferior frontal gyrus− 31265L45Inferior frontal gyrus102241R32Cingulate gyrus29− 7142R19Precuneus− 23− 6143L7Superior parietal lobule31− 78− 2R18Inferior occipital gyrus36− 3942R40Inferior parietal lobule− 33− 65− 3L19Fusiform gyrus

      Table 2, 'arrow stimuli' section of a foci table.

  5. Aug 2015
    1. 1000 Functional Connectomes (“Classic”)a1288, age 18–80 years 24 Str/RS niit1:5ABIDEb1112, age 6–64 years 17 Str/RS niit1:6ADHD-200c973, age 7–26 years 8 Str/RS niit1:7Beijing Enhancedd180, age 17–28 years 1 Str/RS/Diff niit1:8Beijing Eyes Open Eyes Closede48, age 18–30 years 1 Str/RS/Diff niit1:9Beijing

      part of a table...

    Annotators

  6. Jul 2015