95 Matching Annotations
  1. Jun 2024
  2. www.biorxiv.org www.biorxiv.org
    The type of DNA damage response after Decitabine treatment depends on the level of DNMT activity
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    1. EMBOpress 26 Jun 2024

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    biorxiv.org/content/10.1101/2023.09.02.556017v2
  3. www.biorxiv.org www.biorxiv.org
    Structural analysis of SALL4 zinc-finger domain reveals a link between AT-rich DNA binding and Okihiro syndrome
    1
    1. EMBOpress 05 Jun 2024

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    biorxiv.org/content/10.1101/2022.06.14.495968v1
  4. May 2024
  5. www.biorxiv.org www.biorxiv.org
    Difluoromethylornithine rebalances aberrant polyamine ratios in Snyder-Robinson syndrome: mechanism of action and therapeutic potential
    1
    1. EMBOpress 15 May 2024

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    biorxiv.org/content/10.1101/2023.03.30.534977v2
  6. Mar 2024
  7. www.biorxiv.org www.biorxiv.org
    Regulation of branched versus linear Arp2/3-generated actin filaments
    1
    1. EMBOpress 07 Mar 2024

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    biorxiv.org/content/10.1101/2022.05.06.490861v1
  8. www.biorxiv.org www.biorxiv.org
    Structural and biochemical insights into heterotetramer formation between human oncogenic K-Ras4BG12V and Rgl2, a RalA/B activator
    1
    1. EMBOpress 05 Mar 2024

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    biorxiv.org/content/10.1101/2022.10.10.511529v8
  9. Jan 2024
  10. www.biorxiv.org www.biorxiv.org
    Human RAD52 stimulates the RAD51-mediated homology search
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    1. EMBOpress 25 Jan 2024

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    biorxiv.org/content/10.1101/2022.06.27.497340v1
  11. www.biorxiv.org www.biorxiv.org
    The structural basis for deubiquitination by the fingerless USP-type effector TssM
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    1. EMBOpress 25 Jan 2024

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    biorxiv.org/content/10.1101/2023.08.01.551441v1
  12. Dec 2023
  13. www.biorxiv.org www.biorxiv.org
    Monomeric α-Synuclein activates the Plasma Membrane Calcium Pump
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    1. EMBOpress 19 Dec 2023

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    biorxiv.org/content/10.1101/2022.02.21.481193v2
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    Structural analysis shows that the BIR2 domain of E3 ligase XIAP binds across the RIP2 kinase dimer interface
    1
    1. EMBOpress 15 Dec 2023

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    biorxiv.org/content/10.1101/2022.10.14.512215v1
  15. www.biorxiv.org www.biorxiv.org
    Molecular view of ER membrane remodeling by the Sec61/TRAP translocon
    1
    1. EMBOpress 15 Dec 2023

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    biorxiv.org/content/10.1101/2022.09.30.510141v1
  16. www.biorxiv.org www.biorxiv.org
    Mitochondrial phosphoproteomes are functionally specialized across tissues
    1
    1. EMBOpress 14 Dec 2023

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    biorxiv.org/content/10.1101/2022.03.23.485457v1
  17. www.biorxiv.org www.biorxiv.org
    DONSON is required for CMG helicase assembly in the mammalian cell cycle
    1
    1. EMBOpress 12 Dec 2023

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    biorxiv.org/content/10.1101/2023.08.16.553614v1
  18. Sep 2023
  19. www.biorxiv.org www.biorxiv.org
    A novel antifolate suppresses growth of FPGS-deficient cells and overcomes methotrexate resistance
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    1. EMBOpress 06 Sep 2023

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    biorxiv.org/content/10.1101/2023.02.26.530079v2
  20. www.biorxiv.org www.biorxiv.org
    Branched chain amino acid synthesis is coupled to TOR activation early in the cell cycle in yeast
    1
    1. EMBOpress 02 Sep 2023

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    biorxiv.org/content/10.1101/2023.01.10.523468v2
  21. www.biorxiv.org www.biorxiv.org
    Calculating ATP production rates from oxidative phosphorylation and glycolysis during cell activation
    1
    1. EMBOpress 02 Sep 2023

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    biorxiv.org/content/10.1101/2022.04.16.488523v2
  22. www.biorxiv.org www.biorxiv.org
    Distant sequence regions of JBP1 contribute to J-DNA binding
    1
    1. EMBOpress 01 Sep 2023

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    biorxiv.org/content/10.1101/2023.01.23.525147v1
  23. www.biorxiv.org www.biorxiv.org
    Phosphorylation controls spatial and temporal activities of motor-PRC1 complexes to complete mitosis
    1
    1. EMBOpress 01 Sep 2023

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    biorxiv.org/content/10.1101/2023.03.11.531660v1
  24. Aug 2023
  25. www.biorxiv.org www.biorxiv.org
    The C-terminal tail of CSNAP attenuates the CSN complex
    1
    1. EMBOpress 03 Aug 2023

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    biorxiv.org/content/10.1101/2022.07.18.500399v1
  26. Jul 2023
  27. www.biorxiv.org www.biorxiv.org
    Characterization of the REC114-MEI4-IHO1 complex regulating meiotic DNA double-strand break formation
    1
    1. EMBOpress 29 Jul 2023

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    biorxiv.org/content/10.1101/2023.01.11.523614v1
  28. www.biorxiv.org www.biorxiv.org
    The cytochrome b carboxyl-terminal region is necessary for mitochondrial Complex III assembly
    1
    1. EMBOpress 13 Jul 2023

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    biorxiv.org/content/10.1101/2022.11.25.517933v1
  29. www.biorxiv.org www.biorxiv.org
    Disulfide stabilization reveals conserved dynamic features between SARS-CoV-1 and SARS-CoV-2 spikes.
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    1. EMBOpress 13 Jul 2023

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    biorxiv.org/content/10.1101/2022.10.14.512296v1
  30. Jun 2023
  31. www.biorxiv.org www.biorxiv.org
    Structural basis of ubiquitin-independent PP1 complex disassembly by p97
    1
    1. EMBOpress 29 Jun 2023

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    biorxiv.org/content/10.1101/2022.06.24.497491v1
  32. www.biorxiv.org www.biorxiv.org
    Structure-based design and characterization of Parkin activating mutations
    1
    1. EMBOpress 28 Jun 2023

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    biorxiv.org/content/10.1101/2022.02.22.481412v1
  33. www.biorxiv.org www.biorxiv.org
    Mitochondrial dysfunction rapidly modulates the abundance and thermal stability of cellular proteins
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    1. EMBOpress 28 Jun 2023

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    biorxiv.org/content/10.1101/2022.10.27.514032v1
  34. www.biorxiv.org www.biorxiv.org
    Structural insights into ubiquitin chain cleavage by Legionella ovarian tumor deubiquitinases
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    1. EMBOpress 28 Jun 2023

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    biorxiv.org/content/10.1101/2023.01.02.522462v1
  35. www.biorxiv.org www.biorxiv.org
    Multivalent BARD1-nucleosome interactions facilitate H2A ubiquitylation by BRCA1/BARD1
    1
    1. EMBOpress 28 Jun 2023

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    biorxiv.org/content/10.1101/2022.08.09.503292v2
  36. www.biorxiv.org www.biorxiv.org
    Stable kinetochore-microtubule attachment requires loop-dependent Ndc80-Ndc80 binding
    1
    1. EMBOpress 15 Jun 2023

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    biorxiv.org/content/10.1101/2022.08.25.505310v1
  37. May 2023
  38. www.biorxiv.org www.biorxiv.org
    A quantitative fluorescence-based approach to study mitochondrial protein import
    1
    1. EMBOpress 26 May 2023

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    biorxiv.org/content/10.1101/2022.10.10.511594v1
  39. Apr 2023
  40. www.biorxiv.org www.biorxiv.org
    The TUDOR domain of SMN is an H3K79me1 histone mark reader
    1
    1. EMBOpress 11 Apr 2023

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    biorxiv.org/content/10.1101/2022.10.06.511070v1
  41. Mar 2023
  42. www.biorxiv.org www.biorxiv.org
    Peroxisomes contribute to intracellular calcium dynamics
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    1. EMBOpress 15 Mar 2023

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    biorxiv.org/content/10.1101/2020.09.02.279174v1
  43. www.biorxiv.org www.biorxiv.org
    The cryo-EM structure of the CENP-A nucleosome in complex with ggKNL2
    1
    1. EMBOpress 15 Mar 2023

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    biorxiv.org/content/10.1101/2022.06.24.497480v1
  44. www.biorxiv.org www.biorxiv.org
    Activation and inhibition of the C-terminal kinase domain of p90 ribosomal S6 kinases
    1
    1. EMBOpress 09 Mar 2023

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    biorxiv.org/content/10.1101/2022.02.18.481032v1
  45. www.biorxiv.org www.biorxiv.org
    Structure and mechanism of a novel cytomegaloviral DCAF mediating interferon antagonism
    1
    1. EMBOpress 07 Mar 2023

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    biorxiv.org/content/10.1101/2022.05.05.490734v2
  46. Feb 2023
  47. www.biorxiv.org www.biorxiv.org
    MitoStores: Chaperone-controlled protein granules store mitochondrial precursors in the cytosol
    1
    1. EMBOpress 17 Feb 2023

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    biorxiv.org/content/10.1101/2022.08.02.502474v1
  48. Jan 2023
  49. www.biorxiv.org www.biorxiv.org
    Structural and functional characterization of TraI from pKM101 reveals basis for DNA processing
    1
    1. EMBOpress 28 Jan 2023

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    biorxiv.org/content/10.1101/2022.06.02.494495v2
  50. Dec 2022
  51. www.biorxiv.org www.biorxiv.org
    Structural and biochemical basis of FANCI-FANCD2 interdependent ubiquitination
    1
    1. EMBOpress 15 Dec 2022

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    biorxiv.org/content/10.1101/2022.04.07.487446v2
  52. Nov 2022
  53. www.biorxiv.org www.biorxiv.org
    The E3 ligase RNF115 regulates phagosome maturation and host response to bacterial infection
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    1. EMBOpress 23 Nov 2022

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    biorxiv.org/content/10.1101/2021.07.13.452284v2
  54. www.biorxiv.org www.biorxiv.org
    Structure and functional mapping of the KRAB-KAP1 repressor complex
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    1. EMBOpress 21 Nov 2022

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    biorxiv.org/content/10.1101/2022.03.17.484746v1
  55. www.biorxiv.org www.biorxiv.org
    Dipeptidyl peptidase 9 triggers BRCA2 degradation by the N-degron pathway to promote DNA-damage repair
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    1. EMBOpress 21 Nov 2022

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    biorxiv.org/content/10.1101/2020.08.24.265033v1
  56. www.biorxiv.org www.biorxiv.org
    http://biorxiv.org/cgi/content/short/2020.11.10.376822
    1
    1. EMBOpress 21 Nov 2022

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    biorxiv.org/content/10.1101/2020.11.10.376822v2
  57. www.biorxiv.org www.biorxiv.org
    Cryo-EM structure of the human NKCC1 transporter reveals mechanisms of ion coupling and specificity
    1
    1. EMBOpress 21 Nov 2022

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    biorxiv.org/content/10.1101/2021.11.11.468215v1
  58. www.biorxiv.org www.biorxiv.org
    A conserved signaling pathway activates bacterial CBASS immune signaling in response to DNA damage
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    1. EMBOpress 21 Nov 2022

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    biorxiv.org/content/10.1101/2022.04.27.489752v1
  59. www.biorxiv.org www.biorxiv.org
    Topoisomerase II poisons inhibit vertebrate DNA replication through distinct mechanisms
    1
    1. EMBOpress 21 Nov 2022

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    biorxiv.org/content/10.1101/2021.10.12.464107v2
  60. www.biorxiv.org www.biorxiv.org
    Cooperative Amyloid Fibre Binding and Disassembly by the Hsp70 disaggregase
    1
    1. EMBOpress 21 Nov 2022

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    biorxiv.org/content/10.1101/2021.08.29.458036v1
  61. www.biorxiv.org www.biorxiv.org
    Proteome-scale amino-acid resolution footprinting of protein-binding sites in the intrinsically disordered regions of the human proteome
    1
    1. EMBOpress 21 Nov 2022

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      PeerReviewed EMBOPress Molecular Systems Biology biochemistry
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    biorxiv.org/content/10.1101/2021.04.13.439572v1
  62. www.biorxiv.org www.biorxiv.org
    Structure of mammalian V-ATPase with the TLDc domain protein mEAK7 bound
    1
    1. EMBOpress 19 Nov 2022

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    biorxiv.org/content/10.1101/2021.11.03.466369v2
  63. May 2022
  64. www.biorxiv.org www.biorxiv.org
    Molecular insights into RNA recognition and gene regulation by the TRIM-NHL protein Mei-P26
    1
    1. EMBOpress 27 May 2022

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    biorxiv.org/content/10.1101/2021.09.20.461029v1
  65. www.biorxiv.org www.biorxiv.org
    Structural basis for feedforward control in the PINK1/parkin pathway
    1
    1. EMBOpress 24 May 2022

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    biorxiv.org/content/10.1101/2021.08.16.456440v1
  66. Apr 2022
  67. www.biorxiv.org www.biorxiv.org
    Structure of the RZZ complex and molecular basis of Spindly-driven corona assembly at human kinetochores
    1
    1. EMBOpress 23 Apr 2022

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    biorxiv.org/content/10.1101/2021.12.03.471119v1
  68. Mar 2022
  69. www.biorxiv.org www.biorxiv.org
    Stress-induced tyrosine phosphorylation of RtcB modulates IRE1 activity and signaling outputs.
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    biorxiv.org/content/10.1101/2020.03.02.972950v5
  70. www.biorxiv.org www.biorxiv.org
    Disease-linked TDP-43 hyperphosphorylation suppresses TDP-43 condensation and aggregation
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    1. EMBOpress 09 Mar 2022

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    biorxiv.org/content/10.1101/2021.04.30.442163v1
  71. Feb 2022
  72. www.biorxiv.org www.biorxiv.org
    Molecular species selectivity of lipid transport creates a mitochondrial sink for di-unsaturated phospholipids
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    biorxiv.org/content/10.1101/2020.06.08.140129v1
  73. Jan 2022
  74. www.biorxiv.org www.biorxiv.org
    Nascent polypeptide within the exit tunnel ensures continuous translation elongation by stabilizing the translating ribosome
    1
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    biorxiv.org/content/10.1101/2021.02.02.429294v3
  75. Dec 2021
  76. www.biorxiv.org www.biorxiv.org
    The human GID complex engages two independent modules for substrate recruitment
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    biorxiv.org/content/10.1101/2021.04.07.438752v1
  77. www.biorxiv.org www.biorxiv.org
    F-domain valency determines outcome of signaling through the angiopoietin pathway
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    biorxiv.org/content/10.1101/2020.09.19.304188v3
  78. Nov 2021
  79. www.biorxiv.org www.biorxiv.org
    Acyl chain shortening induced by inhibition of acetyl-CoA carboxylase renders phosphatidylcholine redundant
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  80. www.biorxiv.org www.biorxiv.org
    Quantitative Proteomics Identifies PTP1B as Modulator of B Cell Antigen Receptor Signaling
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  81. www.biorxiv.org www.biorxiv.org
    Structural basis for the specificity of PPM1H phosphatase for Rab GTPases
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    biorxiv.org/lookup/doi/10.1101/2021.02.17.431620
  82. Oct 2021
  83. www.biorxiv.org www.biorxiv.org
    Passive receptor dissociation driven by porin threading establishes active colicin transport through Escherichia coli OmpF
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    biorxiv.org/content/10.1101/2021.04.15.439832v1
  84. Jul 2021
  85. www.biorxiv.org www.biorxiv.org
    Nse5/6 inhibits the Smc5/6 ATPase to facilitate DNA substrate selection.
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    A phosphoproteomic approach reveals that PKD3 controls phenylalanine and tyrosine metabolism
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    biorxiv.org/content/10.1101/2020.07.20.211474v1
  87. www.biorxiv.org www.biorxiv.org
    Dynamic closed states of a ligand-gated ion channel captured by cryo-EM and simulations
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    biorxiv.org/content/10.1101/2021.01.04.425171v1
  88. www.biorxiv.org www.biorxiv.org
    Increased levels of the mitochondrial import factor Mia40 prevent the aggregation of polyQ proteins in the cytosol
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    biorxiv.org/content/10.1101/2021.02.02.429331v1
  89. www.biorxiv.org www.biorxiv.org
    Quantifying signal persistence in the T cell signaling network using an optically controllable antigen receptor
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    biorxiv.org/content/10.1101/2020.10.30.362194v1
  90. Apr 2021
  91. www.biorxiv.org www.biorxiv.org
    The structure of bacterial toxin CNFY reveals requirements for secretion, host cell recognition and endosomal release
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    biorxiv.org/content/10.1101/2020.04.07.029181v2
  92. Feb 2021
  93. www.biorxiv.org www.biorxiv.org
    Selective cross-linking of coinciding protein assemblies by in-gel cross-linking mass-spectrometry
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    biorxiv.org/content/10.1101/2020.07.10.193003v1
  94. www.biorxiv.org www.biorxiv.org
    In-depth and 3-Dimensional Exploration of the Budding Yeast Phosphoproteome
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    biorxiv.org/content/10.1101/700070v1
  95. www.biorxiv.org www.biorxiv.org
    Actin filament oxidation by MICAL1 suppresses protections from cofilin-induced disassembly
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    biorxiv.org/content/10.1101/2020.02.26.966614v1
  96. www.biorxiv.org www.biorxiv.org
    Tyrosine phosphorylation regulates hnRNPA2 granule protein partitioning & reduces neurodegeneration
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    biorxiv.org/content/10.1101/2020.03.15.992768v2
  97. doi.org doi.org
    https://doi.org/10.1101/2020.06.18.160614
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  98. www.biorxiv.org www.biorxiv.org
    G-Quadruplexes Act as Sequence Dependent Chaperones via Protein Oligomerization
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    biorxiv.org/content/10.1101/850263v1
  99. Oct 2020
  100. www.biorxiv.org www.biorxiv.org
    A meiosis-specific AAA+ assembly reveals repurposing of ORC during budding yeast gametogenesis
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    biorxiv.org/content/10.1101/598128v1
  101. www.biorxiv.org www.biorxiv.org
    An evolutionary approach to systematic discovery of novel deubiquitinases, applied to Legionella
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    biorxiv.org/content/10.1101/2020.07.01.182683v1
  102. www.biorxiv.org www.biorxiv.org
    Diflunisal targets the HMGB1/CXCL12 heterocomplex and blocks immune cell recruitment
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    biorxiv.org/content/10.1101/563890v1
  103. Jul 2020
  104. www.biorxiv.org www.biorxiv.org
    Identification and characterization of diverse OTU deubiquitinases in bacteria
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    biorxiv.org/content/10.1101/2020.03.28.013474v1
  105. www.biorxiv.org www.biorxiv.org
    Differential functions of FANCI and FANCD2 ubiquitination stabilize ID2 complex on DNA
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    biorxiv.org/content/10.1101/2020.02.03.931576v1
  106. www.biorxiv.org www.biorxiv.org
    Beyond the seed: structural basis for supplementary mircoRNA targeting
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    biorxiv.org/content/10.1101/476960v1
  107. www.biorxiv.org www.biorxiv.org
    Molecular mechanism of translational stalling by inhibitory codon combinations and poly(A) tracts
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    biorxiv.org/content/10.1101/755652v1
  108. www.biorxiv.org www.biorxiv.org
    TBK1-mediated phosphorylation of LC3C and GABARAP-L2 controls autophagosome shedding by ATG4 protease
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    biorxiv.org/content/10.1101/634519v1
  109. www.biorxiv.org www.biorxiv.org
    Characterisation of the c10orf76-PI4KB complex, and its necessity for Golgi PI4P levels and enterovirus replication
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    biorxiv.org/content/10.1101/634592v1
  110. Jun 2020
  111. www.biorxiv.org www.biorxiv.org
    The structure of SALSA/DMBT1 SRCR domains reveal the conserved ligand-binding mechanism of the ancient SRCR-fold
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  112. www.biorxiv.org www.biorxiv.org
    Targeting the Pregnane X Receptor Using Microbial Metabolite Mimicry
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    biorxiv.org/content/10.1101/792671v3
  113. Nov 2019
  114. www.biorxiv.org www.biorxiv.org
    S-acylated Golga7b stabilises DHHC5 at the plasma membrane to regulate desmosome assembly and cell adhesion.
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    biorxiv.org/content/10.1101/481861v1
  115. www.biorxiv.org www.biorxiv.org
    An integrated workflow for cross-linking/mass spectrometry
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    biorxiv.org/content/10.1101/355396v2
  116. Sep 2019
  117. www.biorxiv.org www.biorxiv.org
    Ncl1 mediated metabolic rewiring is critical during metabolic stress
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  118. www.biorxiv.org www.biorxiv.org
    Molecular characterization of CHAD domains as inorganic polyphosphate binding modules
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    biorxiv.org/content/10.1101/567040v1
  119. www.biorxiv.org www.biorxiv.org
    Specificity for deubiquitination of monoubiquitinated FANCD2 is driven by the N-terminus of USP1
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  120. www.biorxiv.org www.biorxiv.org
    The histone chaperone FACT modulates nucleosome structure by tethering its components
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    biorxiv.org/content/10.1101/309708v1
  121. www.biorxiv.org www.biorxiv.org
    Stalk-mediated communication in the dynein motor domain
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    biorxiv.org/content/10.1101/309179v2
  122. www.biorxiv.org www.biorxiv.org
    Structures of the heart specific SERCA2a Ca2+-ATPase
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    biorxiv.org/content/10.1101/344911v1
  123. www.biorxiv.org www.biorxiv.org
    Synergistic Recruitment of UbcH7~Ub and Phosphorylated Ubl Domain Triggers Parkin Activation
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    biorxiv.org/content/10.1101/344952v1
  124. www.biorxiv.org www.biorxiv.org
    Structure of the human pro-myostatin precursor and determinants of growth factor latency
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    biorxiv.org/content/10.1101/153403v2
  125. www.biorxiv.org www.biorxiv.org
    Tolloid cleavage activates latent GDF8 by priming the pro-complex for dissociation
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  126. www.biorxiv.org www.biorxiv.org
    Structural and Functional analysis of the GABARAP Interaction Motif (GIM).
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    Structural and functional dissection of the interplay between lipid and Notch binding by human Notch ligands
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