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    Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae
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    1. EMBOpress 02 Feb 2023

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    biorxiv.org/content/10.1101/2021.07.31.454568v1
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    A molecular mechanism by which amyloid-β induces transcriptional inactivation of CREB in Alzheimer's Disease
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    1. EMBOpress 01 Feb 2023

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    biorxiv.org/content/10.1101/2020.01.08.898304v3
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    A toolbox for systematic discovery of stable and transient protein interactors in baker's yeast
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    1. EMBOpress 31 Jan 2023

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    biorxiv.org/content/10.1101/2022.04.27.489741v1
  5. Jan 2023
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    Structural and functional characterization of TraI from pKM101 reveals basis for DNA processing
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    1. EMBOpress 28 Jan 2023

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    biorxiv.org/content/10.1101/2022.06.02.494495v2
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    Membrane cholesterol regulates inhibition and substrate transport by the glycine transporter, GlyT2
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    1. EMBOpress 28 Jan 2023

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    biorxiv.org/content/10.1101/2022.08.31.506132v1
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    Pan-Cancer landscape of protein activities identifies drivers of signalling dysregulation and patient survival
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    biorxiv.org/content/10.1101/2021.06.09.447741v1
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    SMN promotes mitochondrial metabolic maturation during myogenesis by regulating the MYOD-miRNA axis.
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    1. EMBOpress 27 Jan 2023

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    biorxiv.org/content/10.1101/2022.02.13.480288v1
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    Plasma membrane topography governs the three-dimensional dynamic localization of IgM B cell receptor clusters
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    biorxiv.org/content/10.1101/2022.04.29.489661v1
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    Epigenetic centromere identity is precisely maintained through DNA replication but is uniquely specified among human cells
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    1. EMBOpress 26 Jan 2023

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    biorxiv.org/content/10.1101/2022.09.07.506974v1
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    Identifying novel regulators of placental development using time series transcriptomic data and network analyses
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    1. EMBOpress 26 Jan 2023

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    biorxiv.org/content/10.1101/2022.05.17.492330v1
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    De novo discovery of traits co-occurring with chronic obstructive pulmonary disease
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    biorxiv.org/content/10.1101/2022.07.20.500731v1
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    An isoform-specific function of Cdc42 in regulating mammalian Exo70 during axon formation
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    biorxiv.org/content/10.1101/2022.07.01.498448v1
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    CDK8 and CDK19 act redundantly to control the CFTR pathway in the intestinal epithelium
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    1. EMBOpress 24 Jan 2023

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    biorxiv.org/content/10.1101/2022.01.28.478171v1
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    Adaptation of bacterial proteome reveals a key role of the cell envelope in starvation survival
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    biorxiv.org/content/10.1101/2022.05.18.492425v2
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    Condensin pinches a short negatively supercoiledDNA loop during each round of ATP usage
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    1. EMBOpress 24 Jan 2023

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    biorxiv.org/content/10.1101/2022.06.03.494647v1
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    Comparative analysis of MERFISH spatial transcriptomics with bulk and single-cell RNA sequencing
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    1. EMBOpress 19 Jan 2023

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    biorxiv.org/content/10.1101/2022.03.04.483068v3
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    A synergistic activation of RARb and RARg nuclear receptors restores cell-types specialization during stem cells differentiation by hijacking RARa-controlled program
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    biorxiv.org/content/10.1101/2022.05.31.494116v2
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    NOTCH3 active immunotherapy reduces NOTCH3 deposition in brain capillaries in a CADASIL mouse model
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    1. EMBOpress 19 Jan 2023

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    biorxiv.org/content/10.1101/2022.07.11.499563v1
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    Nuclear envelope reshaping around the vacuole determines the morphology of the ribosomal DNA
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    1. EMBOpress 18 Jan 2023

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    biorxiv.org/content/10.1101/2021.06.23.449658v1
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    Porcine intestinal innate lymphoid cells and lymphocyte spatial context revealed through single-cell RNA sequencing
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    biorxiv.org/content/10.1101/2022.01.09.475571v1
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    Sibling rivalry among the ZBTB transcription factor family: homo vs. heterodimers
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    biorxiv.org/content/10.1101/2021.12.17.472994v2
  24. Dec 2022
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    Stage-specific gene and transcript dynamics in human male germ cells
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    1. EMBOpress 30 Dec 2022

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    biorxiv.org/content/10.1101/2022.03.22.485121v1
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    Cdh5-lineage independent origin of dermal lymphatic vessels revealed by temporally restricted lineage tracing
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    biorxiv.org/content/10.1101/2022.06.08.495310v1
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    Adaptation delay causes a burst of mutations in bacteria responding to oxidative stress
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    biorxiv.org/content/10.1101/2022.05.25.493234v1
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    Endoplasmic Reticulum membranes are continuously required to maintain mitotic spindle size and forces
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    biorxiv.org/content/10.1101/2022.05.14.491942v1
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    Genome-wide Profiling of Histone Modifications in Plasmodium falciparum using CUT&RUN.
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    biorxiv.org/content/10.1101/2022.08.01.502378v2
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    When Yeast Cells Change their Mind: Cell Cycle 'Start' is Reversible under Starvation
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    biorxiv.org/content/10.1101/2021.10.31.466668v1
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    Systematic analysis of ADP-ribose detection reagents and optimisation of sample preparation to detect ADP-ribosylation in vitro and in cells
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    biorxiv.org/content/10.1101/2022.02.22.481411v1
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    Structural and biochemical basis of FANCI-FANCD2 interdependent ubiquitination
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    biorxiv.org/content/10.1101/2022.04.07.487446v2
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    Specific N-glycans regulate an extracellular adhesion complex during somatosensory dendrite patterning
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    biorxiv.org/content/10.1101/2021.10.11.464022v1
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    The dengue virus NS1 protein conveys pro-inflammatory signals by docking onto human high-density lipoproteins
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    biorxiv.org/content/10.1101/2021.05.05.442454v1
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    Drosophila pVALIUM10 TRiP RNAi lines cause undesired silencing of Gateway-based transgenes
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    biorxiv.org/content/10.1101/2022.08.12.503771v2
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    Cue-specific remodeling of the neuronal transcriptome through intron retention programs
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    1. EMBOpress 07 Dec 2022

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    biorxiv.org/content/10.1101/2021.10.13.463312v1
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    Dissecting the co-transcriptome landscape of plants and microbiota members
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    biorxiv.org/content/10.1101/2021.04.25.440543v2
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    Epithelial-mesenchymal transition is the main driver of intrinsic metabolism in cancer cell lines
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    biorxiv.org/content/10.1101/2021.11.02.466992v1
  39. Nov 2022
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    The extracellular matrix fibulin 7 maintains epidermal stem cell heterogeneity during skin aging
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    biorxiv.org/content/10.1101/2022.02.28.482241v1
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    The AAA-ATPase Atad1 and its partners promote degradation of desmin intermediate filaments in muscle
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    biorxiv.org/content/10.1101/2022.01.24.477493v2
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    Live-cell chromosome dynamics in Arabidopsis thaliana reveals increased chromatin mobility in response to DNA damage
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    biorxiv.org/content/10.1101/2021.11.03.466744v2
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    Actin binding domain of Rng2 strongly inhibits actin movement on myosin II HMM through structural changes of actin filaments
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    biorxiv.org/content/10.1101/2020.04.14.041046v4
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    Miro GTPase domains regulate assembly of the mitochondrial motor-adaptor complex
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    biorxiv.org/content/10.1101/2022.05.13.491728v1
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    The E3 ligase RNF115 regulates phagosome maturation and host response to bacterial infection
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    biorxiv.org/content/10.1101/2021.07.13.452284v2
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    Improving the computation efficiency of polygenic risk score modeling: Faster in Julia
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    biorxiv.org/content/10.1101/2021.12.27.474263v1
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    Heterogeneity of the Cancer Cell Line Metabolic Landscape
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    biorxiv.org/content/10.1101/2021.08.19.456093v1
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    A rare human centenarian variant of SIRT6 enhances genome stability and interaction with Lamin A
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    biorxiv.org/content/10.1101/2021.12.13.472381v1
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    m6A is required for resolving progenitor identity during planarian stem cell differentiation
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    biorxiv.org/content/10.1101/2021.07.27.453979v1
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    The Toll pathway mediates Drosophila resilience to Aspergillus mycotoxins through specific Bomanins
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    biorxiv.org/content/10.1101/2022.08.18.504437v1
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    Structure and functional mapping of the KRAB-KAP1 repressor complex
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    biorxiv.org/content/10.1101/2022.03.17.484746v1
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    Bleeding in patients and mice with Alagille syndrome: sex differences and risk factors
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    biorxiv.org/content/10.1101/2021.04.13.439679v2
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    Temporal and sequential transcriptional dynamics define lineage shifts in corticogenesis
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    biorxiv.org/content/10.1101/2022.02.10.479992v1
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    An ERAD-independent role for rhomboid pseudoprotease Dfm1 in mediating sphingolipid homeostasis
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    Dipeptidyl peptidase 9 triggers BRCA2 degradation by the N-degron pathway to promote DNA-damage repair
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    RNA-mediated nucleosome depletion is required for elimination of transposon-derived DNA.
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    Cryo-EM structure of the human NKCC1 transporter reveals mechanisms of ion coupling and specificity
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    Dynamic chromosomal interactions and control of heterochromatin positioning by Ki67
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    The chromatin factor ROW cooperates with BEAF-32 in regulating long-range genes
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    Parkin drives pS65-Ub turnover independently of canonical autophagy in Drosophila
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    Parkin coordinates mitochondrial lipid remodeling to execute mitophagy
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    Cellular stress in brain organoids is limited to a distinct and bioinformatically removable subpopulation.
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    HEAT SHOCK FACTOR BINDING PROTEIN limits meiotic crossovers by repressing HEI10 transcription
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    Hedgehog signaling can enhance glycolytic ATP production in the Drosophila wing disc
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    The molecular architecture of cell cycle arrest
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    TSG101 Associates with PARP1 and is Essential for PARylation and DNA Damage-induced NF-κB Activation
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    Systematic multi-level analysis of an organelle proteome reveals new peroxisomal functions
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    Autophagic state prospectively identifies facultative stem cells in the intestinal epithelium
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    CRYPTOCHROME suppresses the circadian proteome and promotes protein homeostasis
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    Changes in chromatin accessibility are not concordant with transcriptional changes for single-factor perturbations
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    Vesalius: Tissue anatomy from spatial transcriptomic data.
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    CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq
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    Mechanistic insights into the enhancement or inhibition of phase separation by polyubiquitin chains of different lengths or linkages
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    Naked mole-rat hematopoietic stem and progenitors are highly quiescent with an inherent myeloid bias
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    Developmental cell death of cortical projection neurons is controlled by a Bcl11a/Bcl6-dependent pathway
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    Regulation of mitochondrial proteostasis by the proton gradient
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    Heterotypic Assembly Mechanism Regulates CHIP E3 Ligase Activity
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    Species richness determines C. difficile invasion outcome in synthetic human gut communities
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    Basal Neural Stem Cells in the Subventricular Zone Drive Postnatal Neurogenesis with Apical Stem Cells Acting as Proliferation Gatekeepers
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    Genetically-Modified Macrophages Accelerate Myelin Repair
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    Mitotic checkpoint gene expression is tuned by coding sequences
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    Lifespan can be extended during a specific time window early in life
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    IL-21 lowers the B cell receptor affinity threshold for participation in a T cell dependent immune response.
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    Structural mechanism underpinning Thermus oshimai Pif1-mediated G-quadruplex unfolding
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    ALS-linked KIF5A ΔExon27 mutant causes neuronal toxicity through gain of function
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    Nuclear Pore Complex Acetylation Regulates mRNA Export and Cell Cycle Commitment in Budding Yeast
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    Cellular toxicity of iHAP1 and DT-061 does not occur through PP2A-B56 targeting
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    Topoisomerase II poisons inhibit vertebrate DNA replication through distinct mechanisms
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    Cooperative Amyloid Fibre Binding and Disassembly by the Hsp70 disaggregase
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    Optogenetic actuator/biosensor circuits for large-scale interrogation of ERK dynamics identify sources of MAPK signaling robustness.
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    Longitudinal monitoring of disease burden and response using ctDNA from dried blood spots in xenograft models
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    Precise control of microtubule disassembly in living cells
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    Proteome-scale amino-acid resolution footprinting of protein-binding sites in the intrinsically disordered regions of the human proteome
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    Varicella-Zoster Virus ORF9 Is an Antagonist of the DNA Sensor cGAS
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    1. EMBOpress 21 Nov 2022

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      PeerReviewed EMBOPress The EMBO Journal immunology
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    biorxiv.org/content/10.1101/2020.02.11.943415v2
  105. www.biorxiv.org www.biorxiv.org
    External light dark cycle shapes gut microbiota through intrinsically photosensitive retinal ganglion cells
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    1. EMBOpress 21 Nov 2022

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      PeerReviewed EMBOPress EMBO reports neuroscience
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    biorxiv.org/content/10.1101/2020.10.23.351650v1
  106. www.biorxiv.org www.biorxiv.org
    THEM6-mediated lipid remodelling sustains stress resistance in cancer
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    1. EMBOpress 21 Nov 2022

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      PeerReviewed EMBOPress EMBO Molecular Medicine cancer biology
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    biorxiv.org/content/10.1101/2021.04.04.438378v1
  107. www.biorxiv.org www.biorxiv.org
    Growth-dependent heterogeneity in the DNA damage response in Escherichia coli
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    1. EMBOpress 21 Nov 2022

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      PeerReviewed EMBOPress Molecular Systems Biology cell biology
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    biorxiv.org/content/10.1101/2021.05.06.442821v2
  108. www.biorxiv.org www.biorxiv.org
    Dynamic human liver proteome atlas reveals functional insights into disease pathways
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    1. EMBOpress 21 Nov 2022

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      PeerReviewed EMBOPress Molecular Systems Biology systems biology
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    biorxiv.org/content/10.1101/2022.01.28.478194v1
  109. www.biorxiv.org www.biorxiv.org
    Self-ubiquitination of a pathogen type-III effector traps and blocks the autophagy machinery to promote disease
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    1. EMBOpress 21 Nov 2022

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      PeerReviewed EMBOPress The EMBO Journal plant biology
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    biorxiv.org/content/10.1101/2021.03.17.435853v3
  110. www.biorxiv.org www.biorxiv.org
    A temporally controlled sequence of X-chromosomeinactivation and reactivation defines female mouse in vitro germ cells with meiotic potential
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    1. EMBOpress 21 Nov 2022

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      PeerReviewed EMBOPress The EMBO Journal developmental biology
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    biorxiv.org/content/10.1101/2021.08.11.455976v3
  111. www.biorxiv.org www.biorxiv.org
    TRiC activates the unfolded protein response and protects starved stem cells by modulating energy and lipid metabolism during planarian regeneration
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    1. EMBOpress 21 Nov 2022

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      PeerReviewed EMBOPress EMBO reports developmental biology
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    biorxiv.org/content/10.1101/732875v1
  112. www.biorxiv.org www.biorxiv.org
    Reproducibility in systems biology modelling
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    1. EMBOpress 21 Nov 2022

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      PeerReviewed EMBOPress Molecular Systems Biology systems biology
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    biorxiv.org/content/10.1101/2020.08.07.239855v1
  113. www.biorxiv.org www.biorxiv.org
    Structure of mammalian V-ATPase with the TLDc domain protein mEAK7 bound
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    1. EMBOpress 19 Nov 2022

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      PeerReviewed EMBOPress Life Science Alliance biochemistry
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    biorxiv.org/content/10.1101/2021.11.03.466369v2
  114. www.biorxiv.org www.biorxiv.org
    Profiling subcellular localization of nuclear-encoded mitochondrial gene products in zebrafish
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    1. EMBOpress 15 Nov 2022

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      PeerReviewed EMBOPress Life Science Alliance genomics
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    biorxiv.org/content/10.1101/2021.12.22.473872v1
  115. Oct 2022
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    https://biorxiv.org/cgi/content/10.1101/2022.03.06.483172
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    1. EMBOpress 28 Oct 2022

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      PeerReviewed EMBOPress Life Science Alliance genetics
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