23
23 See: Wikidata:Data round-tripping, https://www.wikidata.org/w/index.php?title=Wikidata:Data_round-tripping&oldid=2440906511
23
23 See: Wikidata:Data round-tripping, https://www.wikidata.org/w/index.php?title=Wikidata:Data_round-tripping&oldid=2440906511
https://www.knowledgegraph.tech/speakers/denny-vrandecic/
BIOwikidata
BibliografíaWikidata
BibliografíaWikidata
BIOwikidata
SPARQL
BIOwikidata
BIOmapasDeConocimiento
Wikipedia
console
curl -G https://wdqs-beta.wmflabs.org/bigdata/namespace/wdq/sparql --data-urlencode query='
select distinct ?type where {
?thing a ?type
}
limit
Federated SPARQL Query, incorporating data from both DBpedia & Wikidata
```sparql PREFIX wd: http://www.wikidata.org/entity/ PREFIX wdt: http://www.wikidata.org/prop/direct/ PREFIX wikibase: http://wikiba.se/ontology# PREFIX p: http://www.wikidata.org/prop/ PREFIX ps: http://www.wikidata.org/prop/statement/ PREFIX pq: http://www.wikidata.org/prop/qualifier/ PREFIX bd: http://www.bigdata.com/rdf# PREFIX owl: http://www.w3.org/2002/07/owl# PREFIX rdfs: http://www.w3.org/2000/01/rdf-schema# PREFIX foaf: http://xmlns.com/foaf/0.1/ PREFIX dct: http://purl.org/dc/terms/SELECT DISTINCT ?dbpediaID AS ?href xsd:string(?label) AS ?name ?description ?subjectText ?item AS ?wikidataID ?dbpediaID ?image ?picture WHERE { SERVICE http://query.wikidata.org/sparql { SELECT DISTINCT ?item ?itemLabel ?numero ( SAMPLE(?pic) AS ?picture ) WHERE { ?item p:P528 ?catalogStatement . ?catalogStatement ps:P528 ?numero . ?catalogStatement pq:P972 wd:Q14530 . OPTIONAL { ?item wdt:P18 ?pic } . SERVICE wikibase:label { bd:serviceParam wikibase:language "en" } } GROUP BY ?item ?itemLabel ?numero ORDER BY ?numero }
SERVICE <http://dbpedia.org/sparql>
{
SELECT ?item
?dbpediaID
?label
?image
?description
?subjectText
FROM <http://dbpedia.org>
WHERE
{
?dbpediaID owl:sameAs ?item ;
rdfs:label ?label ;
foaf:depiction ?image ;
rdfs:comment ?description ;
dct:subject
[ rdfs:label ?subjectText ] .
FILTER ( LANG(?label) = "en" )
FILTER ( LANG(?description) = "en" )
}
}
} ```
Esta es una excelente plataforma para encontrar párrafos que carecen de citas en Wikipedia y agregarlas.
Descripción: Esta aplicación permite generar referencias bibliográficas utilizando literatura de Wikidata
Formato para poner las citas https://citation-js.toolforge.org/api/v1/export/Q30000000,Q30000002/bibliography?format=html
Reses Sociales https://mstdn.social/@citationjs@fosstodon.org
CajaHerramientas
Aktive Kompetenz
Offene Metadaten für (eigene) Publikationen selbst zu produzieren bzw. zu pflegen und in der eigenen Wisskomm zu verwenden (z.B. für Nachrichten mit Thumbnails in Social Medias) ist m.E. eine Aktivität und Strategie, die am Rande hier mit Erwähnung finden könnte, vgl. https://redaktionsblog.hypotheses.org/5219 ++ selbsr erschleßen mit https://scholia.toolforge.org/doi/ + 10.17175/wp_2023b führt zu https://scholia.toolforge.org/doi/10.17175/wp_2023b, vgl. das Workshopbeispiel: https://de.wikiversity.org/wiki/Open_Science_Festival/Forschen_im_Wikiversum_(2023)#Publizieren_und_Erschlie%C3%9Fen
```sparql PREFIX pm20: http://purl.org/pressemappe20/folder/ PREFIX p: http://www.wikidata.org/prop/ PREFIX pq: http://www.wikidata.org/prop/qualifier/ PREFIX skos: http://www.w3.org/2004/02/skos/core# PREFIX wdt: http://www.wikidata.org/prop/direct/ PREFIX wd: http://www.wikidata.org/entity/
SELECT ?wd ?skosRelation ?pm20
where { service https://query.wikidata.org/sparql { # wd items with PM20 ID ?wd wdt:P4293 ?pm20Id . filter(isLiteral(?pm20Id)) # # mapping relation optional { ?wd p:P4293/pq:P4390 ?relation . # URL of the equivalent skos property ?relation wdt:P2699 ?skosRelation1 . } } # bind as URIs bind(uri(concat('http://purl.org/pressemappe20/folder/', ?pm20Id)) as ?pm20) bind(if(bound(?skosRelation1), ?skosRelation1, uri('http://www.w3.org/2004/02/skos/core#exactMatch')) as ?skosRelation) } ```
```php
$record) { if ($name<>"count" and $name<>"specials") { foreach ($record["site"] as $sitelink) { $site[$sitelink["dbname"]]=$sitelink["url"]; } } if ($name==="specials") { foreach ($record as $sitelink) { $site[$sitelink["dbname"]]=$sitelink["url"]; } } } /* Open files */ $fp = fopen('data/'.$entity_proc.'.ttl', 'w'); fwrite($fp, "@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .\n"); fwrite($fp, "@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .\n"); fwrite($fp, "@prefix skos: <http://www.w3.org/2004/02/skos/core#> .\n"); fwrite($fp, "@prefix wd: <http://www.wikidata.org/entity/> .\n"); fwrite($fp, "@prefix wdt: <http://www.wikidata.org/prop/direct/> .\n"); fwrite($fp,"\n"); fwrite($fp,"<http://www.wikidata.org/categories> rdf:type skos:ConceptScheme ;\n"); fwrite($fp," skos:prefLabel \"Wikidata categories\"@en .\n\n"); // echo $list_entities."\n"; $url = "https://www.wikidata.org/w/api.php?action=wbgetentities&ids=".$entity_proc."&props=labels|aliases|sitelinks&format=php&utf8="; $a = unserialize(file_get_contents($url)); foreach ($a["entities"] as $entity=>$data_entity) { fwrite($fp,"wd:".$entity." rdf:type skos:Concept ;\n"); fwrite($fp," skos:inScheme <http://www.wikidata.org/categories> "); if (isset($data_entity["labels"])) { foreach ($data_entity["labels"] as $label) { fwrite($fp,";\n skos:prefLabel \"".$label["value"]."\"@".$label["language"]." "); } } if (isset($data_entity["aliases"])) { foreach ($data_entity["aliases"] as $item) { foreach ($item as $label) { fwrite($fp,";\n skos:altLabel> \"".$label["value"]."\"@".$label["language"]." "); } } } foreach ($data_entity["sitelinks"] as $item) { if (in_array($item["site"],$array_sources)) { /* GET BROADER CATEGORIES */ $repeat_query=true; $cmcontinue=""; while ($repeat_query==true) { $repeat_query = false; $url_wiki = $site[$item["site"]]."/w/api.php?action=query&generator=categories&titles=".urlencode($item["title"])."&prop=pageprops|categoryinfo&format=php&utf8=".$cmcontinue; $b = unserialize(file_get_contents($url_wiki)); if (isset($b["continue"]["cmcontinue"])) { $repeat_query = true; $cmcontinue = $b["continue"]["cmcontinue"]; } if (isset($b["query"]["pages"])) { foreach ($b["query"]["pages"] as $broadcat) { if (isset($broadcat["pageprops"]["wikibase_item"])) { if (!isset($broader[$broadcat["pageprops"]["wikibase_item"]])) {$broader[$broadcat["pageprops"]["wikibase_item"]]=$broadcat["title"];} // fwrite($fp,"<http://www.wikidata.org/entity/".$entity_proc."> <http://www.w3.org/2004/02/skos/core#broader> <http://www.wikidata.org/entity/".$broadcat["pageprops"]["wikibase_item"]."> <http://www.wikidata.org/categories/".$item["site"]."> .\n"); } } } } /* GET NARROWER CATEGORIES */ $repeat_query=true; $cmcontinue=""; while ($repeat_query==true) { $repeat_query = false; $url_wiki = $site[$item["site"]]."/w/api.php?action=query&generator=categorymembers&gcmtitle=".urlencode($item["title"])."&gcmtype=subcat&prop=pageprops|categoryinfo&format=php&utf8=".$cmcontinue; $b = unserialize(file_get_contents($url_wiki)); if (isset($b["continue"]["cmcontinue"])) { $repeat_query = true; $cmcontinue = $b["continue"]["cmcontinue"]; } if (isset($b["query"]["pages"])) { foreach ($b["query"]["pages"] as $narrowcat) { if (isset($narrowcat["pageprops"]["wikibase_item"])) { if (!isset($narrower[$narrowcat["pageprops"]["wikibase_item"]]) or $item["site"]=="enwiki") {$narrower[$narrowcat["pageprops"]["wikibase_item"]]=$narrowcat["title"];} // fwrite($fp,"<http://www.wikidata.org/entity/".$entity_proc."> <http://www.w3.org/2004/02/skos/core#narrower> <http://www.wikidata.org/entity/".$narrowcat["pageprops"]["wikibase_item"]."> <http://www.wikidata.org/categories/".$item["site"]."> .\n"); } } } } } } } $prevalue=""; foreach ($broader as $target=>$value) { fwrite($fp,";".$prevalue."\n skos:broader wd:".$target); $prevalue=" # ".$value; } if ($prevalue!=="") {fwrite($fp,$prevalue);} $prevalue=""; foreach ($narrower as $target=>$value) { fwrite($fp,";".$prevalue."\n skos:narrower wd:".$target); $prevalue=" # ".$value; } if ($prevalue!=="") {fwrite($fp,$prevalue);} fwrite($fp,".\n\n"); fclose($fp); ?>```
sparql
SELECT ?type (COUNT(DISTINCT ?oeuvre) AS ?c) WHERE {
VALUES ?type { wd:Q838948 }
?oeuvre wdt:P31 ?type.
{ ?oeuvre ?link ?museum. } union { ?museum ?link ?oeuvre. }
?museum wdt:P31 wd:Q33506.
}
GROUP BY ?type
ORDER BY DESC (?c)
EsposibletambiénutilizarWikidataparahacermapeosycartografíadigitaldebibliotecasodeotrasinstitucioneseducativasyculturales.ObregónSierra(2022)hautilizadoWikidata,atravésdeOpenRefine,Mix’n’matchyQuickStatements,parainsertar7861bibliotecasdeEspaña,ampliarloscampos,propiedadesydatosfaltantes,ytambiéndemuestracómoreutilizarestecontenidoenWikipedia.
Otro ejemplo es el Directorio de bibliotecas y centros de documentación gubernamentales de Bogotá.
Asimismo,Wikidataesunacomunidadparticipativa,conusuariosyusuariasactivasdetodoelmundo,quegeneranproyectosdeinvestigaciónyconectividadentreconocimientosdiversos
Me gusta que presenta a Wikidata como una herramienta, una ontología y una comunidad.
Cc: @ChrisAldrich
kit_wikidata PigmentosBIOcolores
SPARQL
Esto se refiere a eposematismo en general, hay que seleccionar solo coloración aposemática
CienciaAbierta
JacquelineParedesSánchez
⌘ProductoRelevante
ColorChart
ArtículoHDBIOcolores
Zotero
SeminrioBIoinformacion
EmmanuelFloresArellano
InstitucionalizacionBiocolores
identificador_autor,kit_software_biblioteca,kit/perfiles_autor,kit_orcid
https://www.wikidata.org/wiki/Property:P496
https://twitter.com/ORCID_Org @ORCID_Org
DataBase
NARid: https://www.oxfordjournals.org/nar/database/summary/808
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
Manteia
NARid: https://www.oxfordjournals.org/nar/database/summary/1712
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
Search for
NARid: https://www.oxfordjournals.org/nar/database/summary/1422
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Unicellular eukaryotes genome databases
WormQTL
NARid: https://www.oxfordjournals.org/nar/database/summary/1714
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
GenomeCRISPR
NARid: https://www.oxfordjournals.org/nar/database/summary/1958
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
access point
NARid: https://www.oxfordjournals.org/nar/database/summary/1752
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Unicellular eukaryotes genome databases
antiSMASH
NARid: https://www.oxfordjournals.org/nar/database/summary/1949
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
National Mouse Archive
NARid: https://www.oxfordjournals.org/nar/database/summary/1369
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
BioThesaurus
NARid: https://www.oxfordjournals.org/nar/database/summary/915
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
diArk
NARid: https://www.oxfordjournals.org/nar/database/summary/1172
NARCategory: Genomics Databases (non-vertebrate) Subcategory: General genomics databases
https://github.com/lmichan/BioDBS
tw:@BioDivLibrary
https://twitter.com/BioDivLibrary
wd:https://www.wikidata.org/wiki/Q172266
https://github.com/lmichan/BioDBS
wd:https://www.wikidata.org/wiki/Q172266
tw:https://twitter.com/BioDivLibrary
biodiversidad
RRID:SCR_008969
Pseudomonas Genome Database
NARid: https://www.oxfordjournals.org/nar/database/summary/733
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
HomoloGene
NARid: https://www.oxfordjournals.org/nar/database/summary/605
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
BacDive
NARid: https://www.oxfordjournals.org/nar/database/summary/1694
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Taxonomy and identification
PRO
NARid: https://www.oxfordjournals.org/nar/database/summary/1327
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
IMPC data
NARid: https://www.oxfordjournals.org/nar/database/summary/1071 https://www.oxfordjournals.org/nar/database/summary/1711
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
Viral Genome Sequences
NARid: https://www.oxfordjournals.org/nar/database/summary/602 https://www.oxfordjournals.org/nar/database/summary/909
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Viral genome databases
ICEberg 2.0
NARid: https://www.oxfordjournals.org/nar/database/summary/1506
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
Search for.
NARid: https://www.oxfordjournals.org/nar/database/summary/1509
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Fungal genome databases
GONUTS
NARid: https://www.oxfordjournals.org/nar/database/summary/1561
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
PROPHECY Database
NARid: https://www.oxfordjournals.org/nar/database/summary/730
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Fungal genome databases
H²DB
NARid: https://www.oxfordjournals.org/nar/database/summary/1637
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
The specialized Hepatitis B Virus
NARid: https://www.oxfordjournals.org/nar/database/summary/1618
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Viral genome databases
BacWGSTdb
NARid: https://www.oxfordjournals.org/nar/database/summary/1867
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Taxonomy and identification
euGenes
NARid: https://www.oxfordjournals.org/nar/database/summary/396
NARCategory: Human and other Vertebrate Genomes
Subcategory: Model organisms, comparative genomics
Chlamydiae Database
NARid: https://www.oxfordjournals.org/nar/database/summary/2005
Category: Genomics Databases (non-vertebrate)
Subcategory: Prokaryotic genome databases
EffectiveDB
NARid: https://www.oxfordjournals.org/nar/database/summary/1409
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
Ontobee
NARid: https://www.oxfordjournals.org/nar/database/summary/1938
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
dictyBase
NARid: https://www.oxfordjournals.org/nar/database/summary/446
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Unicellular eukaryotes genome databases
LPSN
NARid: https://www.oxfordjournals.org/nar/database/summary/1697
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Taxonomy and identification
LPSN
NARid: https://www.oxfordjournals.org/nar/database/summary/1697
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Taxonomy and identification
HAMAP
NARid: https://www.oxfordjournals.org/nar/database/summary/1210
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
MinervaMaríaRomeroPérez
FernandoMoctezumaSoto
https://github.com/lmichan/BioDBS
nar:https://academic.oup.com/nar/article/49/D1/D1/6059975
wd:https://www.wikidata.org/wiki/Q110584966
dc:subject: "COVID-19"
dc:date: 2021
platform to discover potential drugs and targets of COVID-19 at whole transcriptome scale
https://github.com/lmichan/BioDBS
narid:https://www.oxfordjournals.org/nar/database/summary/672 narCategory:Plant databases Subcategory:General plant databases
narid:https://www.oxfordjournals.org/nar/database/summary/447
wd:https://www.wikidata.org/wiki/Q5281152
tw:https://twitter.com/DisProt_db/status/1505842904199319552
fuente de información:unicamente_lliteratura
https://github.com/lmichan/BioDBS
wd:https://www.wikidata.org/wiki/Q901755
narid:https://www.oxfordjournals.org/nar/database/summary/7
Type: Nucleotide Sequence Databases
https://github.com/lmichan/BioDBS
wd:https://www.wikidata.org/wiki/Q110577226
narid:https://www.oxfordjournals.org/nar/database/summary/2224
dc_subject:"COVID-19"
dc_date:2021
https://github.com/lmichan/BioDBS
nar:https://academic.oup.com/nar/article/50/D1/D1/6495890
wd:https://www.wikidata.org/wiki/Q110607528
NOTAS:
Falta agregar el artículo de la fuente a wikidata 10.1093/nar/gkab701
https://github.com/lmichan/BioDBS
nar:https://academic.oup.com/nar/article/49/D1/D1/6059975
wd:https://www.wikidata.org/wiki/Q110584892
nar:Aparece en el artículo pero no lo encuentro en la base de datos
dc_subject: "COVID-19"
dc_date: 2021
Claude Shannon
MinervaMaríaRomeroPérez
Subti-Apps
NARid: https://www.oxfordjournals.org/nar/database/summary/110 https://www.oxfordjournals.org/nar/database/summary/1563
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
CauloBrowser
NARid: https://www.oxfordjournals.org/nar/database/summary/1865
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
MouseNetV2
NARid: https://www.oxfordjournals.org/nar/database/summary/1877
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
SuperFly
NARid: https://www.oxfordjournals.org/nar/database/summary/1796
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
the papillomavirus episteme
NARid: https://www.oxfordjournals.org/nar/database/summary/1619
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Viral genome databases
MicroScope
NARid: https://www.oxfordjournals.org/nar/database/summary/1666
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
WFCC
NARid: https://www.oxfordjournals.org/nar/database/summary/1954
NAR Category: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
database
NARid: https://www.oxfordjournals.org/nar/database/summary/1639
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
database site
NARid: https://www.oxfordjournals.org/nar/database/summary/556
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
Ridom
NARid: https://www.oxfordjournals.org/nar/database/summary/299
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Taxonomy and identification